data_PRD_000009
# 
_pdbx_reference_molecule.prd_id                       PRD_000009 
_pdbx_reference_molecule.name                         "Actinomycin Z3" 
_pdbx_reference_molecule.represent_as                 polymer 
_pdbx_reference_molecule.type                         Polypeptide 
_pdbx_reference_molecule.type_evidence_code           ? 
_pdbx_reference_molecule.class                        Antibiotic 
_pdbx_reference_molecule.class_evidence_code          ? 
_pdbx_reference_molecule.formula                      "C62 H83 Cl N12 O18" 
_pdbx_reference_molecule.formula_weight               1319.845 
_pdbx_reference_molecule.chem_comp_id                 ? 
_pdbx_reference_molecule.release_status               REL 
_pdbx_reference_molecule.replaces                     ? 
_pdbx_reference_molecule.replaced_by                  ? 
_pdbx_reference_molecule.compound_details             
;ACTINOMYCIN Z3 IS A BICYCLIC PEPTIDE, A MEMBER OF THE
ACTINOMYCIN FAMILY.
HERE, ACTINOMYCIN D IS REPRESENTED BY THE SEQUENCE (SEQRES)
;
_pdbx_reference_molecule.description                  
;ACTINOMYCIN Z3 CONSISTS OF TWO PENTAMER
RINGS LINKED BY THE CHROMOPHORE (PXZ)
;
_pdbx_reference_molecule.representative_PDB_id_code   1a7z 
# 
_pdbx_reference_entity_list.prd_id          PRD_000009 
_pdbx_reference_entity_list.ref_entity_id   1 
_pdbx_reference_entity_list.component_id    1 
_pdbx_reference_entity_list.type            polymer 
_pdbx_reference_entity_list.details         "PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 11" 
# 
loop_
_pdbx_reference_entity_poly_link.prd_id 
_pdbx_reference_entity_poly_link.ref_entity_id 
_pdbx_reference_entity_poly_link.link_id 
_pdbx_reference_entity_poly_link.atom_id_1 
_pdbx_reference_entity_poly_link.comp_id_1 
_pdbx_reference_entity_poly_link.entity_seq_num_1 
_pdbx_reference_entity_poly_link.atom_id_2 
_pdbx_reference_entity_poly_link.comp_id_2 
_pdbx_reference_entity_poly_link.entity_seq_num_2 
_pdbx_reference_entity_poly_link.value_order 
_pdbx_reference_entity_poly_link.component_id 
_pdbx_reference_entity_poly_link.details 
_pdbx_reference_entity_poly_link.insert_code_1 
_pdbx_reference_entity_poly_link.insert_code_2 
PRD_000009 1 1  N     CTH 1  C0 PXZ 6  sing 1 ? ? ? 
PRD_000009 1 2  C     CTH 1  N  DVA 2  sing 1 ? ? ? 
PRD_000009 1 3  OG1   CTH 1  C  MAA 5  sing 1 ? ? ? 
PRD_000009 1 4  C     DVA 2  N  POM 3  sing 1 ? ? ? 
PRD_000009 1 5  C     POM 3  N  SAR 4  sing 1 ? ? ? 
PRD_000009 1 6  C     SAR 4  N  MAA 5  sing 1 ? ? ? 
PRD_000009 1 7  "C0'" PXZ 6  N  THR 7  sing 1 ? ? ? 
PRD_000009 1 8  C     THR 7  N  DVA 8  sing 1 ? ? ? 
PRD_000009 1 9  OG1   THR 7  C  MVA 11 sing 1 ? ? ? 
PRD_000009 1 10 C     DVA 8  N  H5M 9  sing 1 ? ? ? 
PRD_000009 1 11 C     H5M 9  N  SAR 10 sing 1 ? ? ? 
PRD_000009 1 12 C     SAR 10 N  MVA 11 sing 1 ? ? ? 
# 
_pdbx_reference_entity_poly.prd_id          PRD_000009 
_pdbx_reference_entity_poly.ref_entity_id   1 
_pdbx_reference_entity_poly.db_code         NOR00237 
_pdbx_reference_entity_poly.db_name         NOR 
_pdbx_reference_entity_poly.type            peptide-like 
# 
_pdbx_reference_entity_sequence.prd_id          PRD_000009 
_pdbx_reference_entity_sequence.ref_entity_id   1 
_pdbx_reference_entity_sequence.type            peptide-like 
_pdbx_reference_entity_sequence.NRP_flag        Y 
# 
loop_
_pdbx_reference_entity_poly_seq.prd_id 
_pdbx_reference_entity_poly_seq.ref_entity_id 
_pdbx_reference_entity_poly_seq.num 
_pdbx_reference_entity_poly_seq.mon_id 
_pdbx_reference_entity_poly_seq.parent_mon_id 
_pdbx_reference_entity_poly_seq.hetero 
_pdbx_reference_entity_poly_seq.observed 
PRD_000009 1 1  CTH THR N Y 
PRD_000009 1 2  DVA VAL N Y 
PRD_000009 1 3  POM PRO N Y 
PRD_000009 1 4  SAR GLY N Y 
PRD_000009 1 5  MAA VAL N Y 
PRD_000009 1 6  PXZ ?   N Y 
PRD_000009 1 7  THR THR N Y 
PRD_000009 1 8  DVA VAL N Y 
PRD_000009 1 9  H5M PRO N Y 
PRD_000009 1 10 SAR GLY N Y 
PRD_000009 1 11 MVA VAL N Y 
# 
_pdbx_reference_entity_src_nat.prd_id                PRD_000009 
_pdbx_reference_entity_src_nat.ref_entity_id         1 
_pdbx_reference_entity_src_nat.ordinal               1 
_pdbx_reference_entity_src_nat.taxid                 1931 
_pdbx_reference_entity_src_nat.organism_scientific   "Streptomyces sp." 
_pdbx_reference_entity_src_nat.source                ? 
_pdbx_reference_entity_src_nat.db_code               NOR00237 
_pdbx_reference_entity_src_nat.db_name               Norine 
_pdbx_reference_entity_src_nat.strain                ? 
# 
loop_
_pdbx_prd_audit.prd_id 
_pdbx_prd_audit.date 
_pdbx_prd_audit.processing_site 
_pdbx_prd_audit.action_type 
PRD_000009 2012-02-01 RCSB "Create molecule"    
PRD_000009 2012-07-09 PDBE "Other modification" 
PRD_000009 2012-12-12 RCSB "Initial release"    
PRD_000009 2013-06-03 RCSB "Other modification" 
PRD_000009 2017-05-04 RCSB "Other modification" 
PRD_000009 2023-09-20 PDBE "Modify audit"       
PRD_000009 2023-11-03 PDBE "Other modification" 
# 
