data_PRDCC_900130
# 
_chem_comp.id                                    PRD_900130 
_chem_comp.name                                  "Lewis A antigen, alpha anomer" 
_chem_comp.type                                  saccharide 
_chem_comp.formula                               "C20 H35 N O15" 
_chem_comp.pdbx_release_status                   REF_ONLY 
_chem_comp.formula_weight                        529.490 
_chem_comp.pdbx_type                             ? 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    ? 
_chem_comp.pdbx_initial_date                     ? 
_chem_comp.pdbx_modified_date                    ? 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   ? 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   ? 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_pcm                              ? 
_chem_comp.pdbx_processing_site                  ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_residue_numbering 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_polymer_type 
_chem_comp_atom.pdbx_ref_id 
_chem_comp_atom.pdbx_component_id 
_chem_comp_atom.pdbx_ordinal 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
PRD_900130 C1  C1  C 0 1 N N S -7.958  -14.324 50.130 -1.343 3.605  0.233  NDG 1 C1  polymer 1 1 1  ? ? ? 
PRD_900130 C2  C2  C 0 1 N N R -8.397  -14.456 48.674 -1.596 2.275  -0.482 NDG 1 C2  polymer 1 1 2  ? ? ? 
PRD_900130 C3  C3  C 0 1 N N R -9.798  -14.080 48.466 -0.567 1.245  -0.006 NDG 1 C3  polymer 1 1 3  ? ? ? 
PRD_900130 C4  C4  C 0 1 N N S -10.678 -14.703 49.389 0.841  1.788  -0.268 NDG 1 C4  polymer 1 1 4  ? ? ? 
PRD_900130 C5  C5  C 0 1 N N R -10.204 -14.622 50.838 1.000  3.136  0.438  NDG 1 C5  polymer 1 1 5  ? ? ? 
PRD_900130 C6  C6  C 0 1 N N N -11.025 -15.437 51.752 2.383  3.713  0.132  NDG 1 C6  polymer 1 1 6  ? ? ? 
PRD_900130 C7  C7  C 0 1 N N N -6.554  -14.288 46.893 -3.998 2.238  -0.889 NDG 1 C7  polymer 1 1 7  ? ? ? 
PRD_900130 C8  C8  C 0 1 N N N -5.665  -13.478 46.051 -5.387 1.749  -0.567 NDG 1 C8  polymer 1 1 8  ? ? ? 
PRD_900130 O1  O1  O 0 1 N N N -8.799  -15.016 50.989 -0.006 4.038  -0.027 NDG 1 O5  polymer 1 1 9  ? ? ? 
PRD_900130 O2  O2  O 0 1 N N N -10.188 -14.388 47.039 -0.749 0.022  -0.722 NDG 1 O3  polymer 1 1 10 ? ? ? 
PRD_900130 O3  O3  O 0 1 N N N -12.000 -14.070 49.285 1.810  0.867  0.238  NDG 1 O4  polymer 1 1 11 ? ? ? 
PRD_900130 O4  O4  O 0 1 N N N -11.183 -16.774 51.409 2.584  4.902  0.900  NDG 1 O6  polymer 1 1 12 ? ? ? 
PRD_900130 O5  O5  O 0 1 N N N -6.532  -15.509 46.854 -3.827 3.025  -1.795 NDG 1 O7  polymer 1 1 13 ? ? ? 
PRD_900130 N1  N1  N 0 1 N N N -7.504  -13.621 47.820 -2.946 1.800  -0.169 NDG 1 N2  polymer 1 1 14 ? ? ? 
PRD_900130 O6  O6  O 0 1 N Y N -7.980  -12.957 50.494 -1.523 3.432  1.640  NDG 1 O1  polymer 1 1 15 ? ? ? 
PRD_900130 C9  C9  C 0 1 N N R -10.324 -13.240 46.241 -1.658 -0.887 -0.098 GAL 2 C1  polymer 1 1 16 ? ? ? 
PRD_900130 C10 C10 C 0 1 N N R -10.464 -13.642 44.773 -1.872 -2.100 -1.007 GAL 2 C2  polymer 1 1 17 ? ? ? 
PRD_900130 C11 C11 C 0 1 N N S -10.917 -12.537 43.904 -2.799 -3.097 -0.305 GAL 2 C3  polymer 1 1 18 ? ? ? 
PRD_900130 C12 C12 C 0 1 N N R -12.024 -11.768 44.448 -2.189 -3.483 1.046  GAL 2 C4  polymer 1 1 19 ? ? ? 
PRD_900130 C13 C13 C 0 1 N N R -11.716 -11.330 45.847 -1.963 -2.216 1.875  GAL 2 C5  polymer 1 1 20 ? ? ? 
PRD_900130 C14 C14 C 0 1 N N N -12.808 -10.544 46.442 -1.298 -2.587 3.202  GAL 2 C6  polymer 1 1 21 ? ? ? 
PRD_900130 O7  O7  O 0 1 N N N -9.249  -14.153 44.334 -2.466 -1.678 -2.236 GAL 2 O2  polymer 1 1 22 ? ? ? 
PRD_900130 O8  O8  O 0 1 N N N -11.233 -13.019 42.578 -2.945 -4.265 -1.115 GAL 2 O3  polymer 1 1 23 ? ? ? 
PRD_900130 O9  O9  O 0 1 N N N -13.225 -12.516 44.433 -0.940 -4.143 0.834  GAL 2 O4  polymer 1 1 24 ? ? ? 
PRD_900130 O10 O10 O 0 1 N N N -11.434 -12.511 46.698 -1.118 -1.319 1.152  GAL 2 O5  polymer 1 1 25 ? ? ? 
PRD_900130 O11 O11 O 0 1 N N N -12.594 -9.970  47.726 -1.194 -1.422 4.024  GAL 2 O6  polymer 1 1 26 ? ? ? 
PRD_900130 C15 C15 C 0 1 N N R -13.035 -15.004 49.399 2.964  0.722  -0.592 FUC 3 C1  polymer 1 1 27 ? ? ? 
PRD_900130 C16 C16 C 0 1 N N S -14.327 -14.269 49.754 4.025  -0.096 0.148  FUC 3 C2  polymer 1 1 28 ? ? ? 
PRD_900130 C17 C17 C 0 1 N N R -14.722 -13.378 48.671 3.476  -1.498 0.428  FUC 3 C3  polymer 1 1 29 ? ? ? 
PRD_900130 C18 C18 C 0 1 N N S -14.913 -14.093 47.465 3.062  -2.146 -0.896 FUC 3 C4  polymer 1 1 30 ? ? ? 
PRD_900130 C19 C19 C 0 1 N N S -13.720 -14.971 47.076 2.037  -1.249 -1.596 FUC 3 C5  polymer 1 1 31 ? ? ? 
PRD_900130 C20 C20 C 0 1 N N N -14.126 -15.916 46.046 1.663  -1.860 -2.948 FUC 3 C6  polymer 1 1 32 ? ? ? 
PRD_900130 O12 O12 O 0 1 N N N -14.180 -13.549 50.942 4.348  0.547  1.383  FUC 3 O2  polymer 1 1 33 ? ? ? 
PRD_900130 O13 O13 O 0 1 N N N -15.962 -12.743 49.036 4.486  -2.291 1.054  FUC 3 O3  polymer 1 1 34 ? ? ? 
PRD_900130 O14 O14 O 0 1 N N N -16.045 -14.947 47.684 4.210  -2.301 -1.732 FUC 3 O4  polymer 1 1 35 ? ? ? 
PRD_900130 O15 O15 O 0 1 N N N -13.156 -15.728 48.208 2.601  0.048  -1.799 FUC 3 O5  polymer 1 1 36 ? ? ? 
PRD_900130 H1  H1  H 0 1 N N N -6.932  -14.712 50.214 -2.045 4.354  -0.134 NDG 1 H1  polymer 1 1 37 ? ? ? 
PRD_900130 H2  H2  H 0 1 N N N -8.270  -15.508 48.379 -1.499 2.416  -1.559 NDG 1 H2  polymer 1 1 38 ? ? ? 
PRD_900130 H3  H3  H 0 1 N N N -9.875  -12.990 48.596 -0.697 1.067  1.061  NDG 1 H3  polymer 1 1 39 ? ? ? 
PRD_900130 H4  H4  H 0 1 N N N -10.780 -15.767 49.128 0.988  1.919  -1.340 NDG 1 H4  polymer 1 1 40 ? ? ? 
PRD_900130 H5  H5  H 0 1 N N N -10.295 -13.571 51.151 0.894  2.998  1.514  NDG 1 H5  polymer 1 1 41 ? ? ? 
PRD_900130 H6  H6  H 0 0 N N N -10.557 -15.399 52.747 3.148  2.981  0.391  NDG 1 H61 polymer 1 1 42 ? ? ? 
PRD_900130 H7  H7  H 0 0 N N N -12.026 -14.982 51.800 2.451  3.951  -0.929 NDG 1 H62 polymer 1 1 43 ? ? ? 
PRD_900130 H8  H8  H 0 0 N N N -5.036  -14.140 45.438 -5.598 0.849  -1.145 NDG 1 H81 polymer 1 1 44 ? ? ? 
PRD_900130 H9  H9  H 0 0 N N N -6.268  -12.834 45.395 -5.454 1.521  0.497  NDG 1 H82 polymer 1 1 45 ? ? ? 
PRD_900130 H10 H10 H 0 0 N N N -5.024  -12.853 46.690 -6.112 2.522  -0.819 NDG 1 H83 polymer 1 1 46 ? ? ? 
PRD_900130 H11 H11 H 0 1 N Y N -11.725 -17.206 52.059 3.443  5.323  0.756  NDG 1 HO6 polymer 1 1 47 ? ? ? 
PRD_900130 H12 H12 H 0 1 N N N -7.544  -12.623 47.871 -3.082 1.170  0.556  NDG 1 HN2 polymer 1 1 48 ? ? ? 
PRD_900130 H13 H13 H 0 1 N Y N -7.708  -12.866 51.400 -1.378 4.236  2.157  NDG 1 HO1 polymer 1 1 49 ? ? ? 
PRD_900130 H14 H14 H 0 1 N N N -9.419  -12.622 46.334 -2.612 -0.388 0.072  GAL 2 H1  polymer 1 1 50 ? ? ? 
PRD_900130 H15 H15 H 0 1 N N N -11.222 -14.437 44.726 -0.912 -2.576 -1.210 GAL 2 H2  polymer 1 1 51 ? ? ? 
PRD_900130 H16 H16 H 0 1 N N N -10.067 -11.847 43.802 -3.775 -2.637 -0.147 GAL 2 H3  polymer 1 1 52 ? ? ? 
PRD_900130 H17 H17 H 0 1 N N N -12.157 -10.866 43.833 -2.869 -4.149 1.576  GAL 2 H4  polymer 1 1 53 ? ? ? 
PRD_900130 H18 H18 H 0 1 N N N -10.813 -10.703 45.817 -2.921 -1.734 2.071  GAL 2 H5  polymer 1 1 54 ? ? ? 
PRD_900130 H19 H19 H 0 1 N N N -13.034 -9.720  45.749 -1.900 -3.339 3.712  GAL 2 H61 polymer 1 1 55 ? ? ? 
PRD_900130 H20 H20 H 0 1 N N N -13.683 -11.207 46.521 -0.303 -2.987 3.010  GAL 2 H62 polymer 1 1 56 ? ? ? 
PRD_900130 H21 H21 H 0 1 N Y N -9.323  -14.407 43.422 -1.934 -1.041 -2.731 GAL 2 HO2 polymer 1 1 57 ? ? ? 
PRD_900130 H22 H22 H 0 1 N Y N -11.522 -12.293 42.037 -3.321 -4.094 -1.989 GAL 2 HO3 polymer 1 1 58 ? ? ? 
PRD_900130 H23 H23 H 0 1 N Y N -13.930 -11.991 44.793 -1.007 -4.953 0.310  GAL 2 HO4 polymer 1 1 59 ? ? ? 
PRD_900130 H24 H24 H 0 1 N Y N -13.370 -9.492  47.993 -0.780 -1.583 4.883  GAL 2 HO6 polymer 1 1 60 ? ? ? 
PRD_900130 H25 H25 H 0 1 N N N -12.810 -15.697 50.223 3.365  1.707  -0.832 FUC 3 H1  polymer 1 1 61 ? ? ? 
PRD_900130 H26 H26 H 0 1 N N N -15.114 -15.027 49.885 4.921  -0.172 -0.468 FUC 3 H2  polymer 1 1 62 ? ? ? 
PRD_900130 H27 H27 H 0 1 N N N -13.945 -12.612 48.531 2.609  -1.425 1.085  FUC 3 H3  polymer 1 1 63 ? ? ? 
PRD_900130 H28 H28 H 0 1 N N N -15.122 -13.397 46.639 2.618  -3.122 -0.701 FUC 3 H4  polymer 1 1 64 ? ? ? 
PRD_900130 H29 H29 H 0 1 N N N -12.937 -14.315 46.668 1.144  -1.165 -0.976 FUC 3 H5  polymer 1 1 65 ? ? ? 
PRD_900130 H30 H30 H 0 1 N N N -13.269 -16.546 45.767 1.234  -2.850 -2.793 FUC 3 H61 polymer 1 1 66 ? ? ? 
PRD_900130 H31 H31 H 0 1 N N N -14.938 -16.551 46.431 0.933  -1.222 -3.446 FUC 3 H62 polymer 1 1 67 ? ? ? 
PRD_900130 H32 H32 H 0 1 N N N -14.479 -15.365 45.162 2.556  -1.944 -3.568 FUC 3 H63 polymer 1 1 68 ? ? ? 
PRD_900130 H33 H33 H 0 1 N Y N -14.993 -13.101 51.144 4.698  1.442  1.281  FUC 3 HO2 polymer 1 1 69 ? ? ? 
PRD_900130 H34 H34 H 0 1 N Y N -16.235 -12.157 48.340 4.801  -1.935 1.896  FUC 3 HO3 polymer 1 1 70 ? ? ? 
PRD_900130 H35 H35 H 0 1 N Y N -16.217 -15.453 46.899 4.021  -2.706 -2.589 FUC 3 HO4 polymer 1 1 71 ? ? ? 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PRD_900130 C1  C2  SING N N 1  
PRD_900130 C1  O1  SING N N 2  
PRD_900130 C1  O6  SING N N 3  
PRD_900130 C1  H1  SING N N 4  
PRD_900130 C2  C3  SING N N 5  
PRD_900130 C2  N1  SING N N 6  
PRD_900130 C2  H2  SING N N 7  
PRD_900130 C3  C4  SING N N 8  
PRD_900130 C3  O2  SING N N 9  
PRD_900130 C3  H3  SING N N 10 
PRD_900130 C4  C5  SING N N 11 
PRD_900130 C4  O3  SING N N 12 
PRD_900130 C4  H4  SING N N 13 
PRD_900130 C5  C6  SING N N 14 
PRD_900130 C5  O1  SING N N 15 
PRD_900130 C5  H5  SING N N 16 
PRD_900130 C6  O4  SING N N 17 
PRD_900130 C6  H6  SING N N 18 
PRD_900130 C6  H7  SING N N 19 
PRD_900130 C7  C8  SING N N 20 
PRD_900130 C7  O5  DOUB N N 21 
PRD_900130 C7  N1  SING N N 22 
PRD_900130 C8  H8  SING N N 23 
PRD_900130 C8  H9  SING N N 24 
PRD_900130 C8  H10 SING N N 25 
PRD_900130 O4  H11 SING N N 26 
PRD_900130 N1  H12 SING N N 27 
PRD_900130 O6  H13 SING N N 28 
PRD_900130 C9  C10 SING N N 29 
PRD_900130 C9  O10 SING N N 30 
PRD_900130 C9  H14 SING N N 31 
PRD_900130 C10 C11 SING N N 32 
PRD_900130 C10 O7  SING N N 33 
PRD_900130 C10 H15 SING N N 34 
PRD_900130 C11 C12 SING N N 35 
PRD_900130 C11 O8  SING N N 36 
PRD_900130 C11 H16 SING N N 37 
PRD_900130 C12 C13 SING N N 38 
PRD_900130 C12 O9  SING N N 39 
PRD_900130 C12 H17 SING N N 40 
PRD_900130 C13 C14 SING N N 41 
PRD_900130 C13 O10 SING N N 42 
PRD_900130 C13 H18 SING N N 43 
PRD_900130 C14 O11 SING N N 44 
PRD_900130 C14 H19 SING N N 45 
PRD_900130 C14 H20 SING N N 46 
PRD_900130 O7  H21 SING N N 47 
PRD_900130 O8  H22 SING N N 48 
PRD_900130 O9  H23 SING N N 49 
PRD_900130 O11 H24 SING N N 50 
PRD_900130 C15 C16 SING N N 51 
PRD_900130 C15 O15 SING N N 52 
PRD_900130 C15 H25 SING N N 53 
PRD_900130 C16 C17 SING N N 54 
PRD_900130 C16 O12 SING N N 55 
PRD_900130 C16 H26 SING N N 56 
PRD_900130 C17 C18 SING N N 57 
PRD_900130 C17 O13 SING N N 58 
PRD_900130 C17 H27 SING N N 59 
PRD_900130 C18 C19 SING N N 60 
PRD_900130 C18 O14 SING N N 61 
PRD_900130 C18 H28 SING N N 62 
PRD_900130 C19 C20 SING N N 63 
PRD_900130 C19 O15 SING N N 64 
PRD_900130 C19 H29 SING N N 65 
PRD_900130 C20 H30 SING N N 66 
PRD_900130 C20 H31 SING N N 67 
PRD_900130 C20 H32 SING N N 68 
PRD_900130 O12 H33 SING N N 69 
PRD_900130 O13 H34 SING N N 70 
PRD_900130 O14 H35 SING N N 71 
PRD_900130 O2  C9  SING N N 72 
PRD_900130 O3  C15 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PRD_900130 InChI            InChI                1.06  "InChI=1S/C20H35NO15/c1-5-10(25)12(27)14(29)19(32-5)35-16-8(4-23)33-18(31)9(21-6(2)24)17(16)36-20-15(30)13(28)11(26)7(3-22)34-20/h5,7-20,22-23,25-31H,3-4H2,1-2H3,(H,21,24)/t5-,7+,8+,9+,10+,11-,12+,13-,14-,15+,16+,17+,18-,19-,20-/m0/s1" 
PRD_900130 InChIKey         InChI                1.06  CFDVGUXRLQWLJX-QNTOMPQOSA-N                                                                                                                                                                                                                 
PRD_900130 SMILES_CANONICAL CACTVS               3.385 "C[C@@H]1O[C@@H](O[C@@H]2[C@@H](CO)O[C@H](O)[C@H](NC(C)=O)[C@H]2O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)[C@@H](O)[C@H](O)[C@@H]1O"                                                                                                        
PRD_900130 SMILES           CACTVS               3.385 "C[CH]1O[CH](O[CH]2[CH](CO)O[CH](O)[CH](NC(C)=O)[CH]2O[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3O)[CH](O)[CH](O)[CH]1O"                                                                                                                              
PRD_900130 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O)NC(=O)C)O)CO)O)O)O"                                                                                                     
PRD_900130 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)OC2C(OC(C(C2OC3C(C(C(C(O3)CO)O)O)O)NC(=O)C)O)CO)O)O)O"                                                                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           PRD_900130 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        
;~{N}-[(2~{S},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-4-[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris
(oxidanyl)oxan-2-yl]oxy-5-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2-oxidanyl-oxan-3-
yl]ethanamide
;
# 
