data_A1IO0
# 
_chem_comp.id                                    A1IO0 
_chem_comp.name                                  "7-[(3~{S},4~{S},6~{R})-1-[(2~{S})-2-azanyl-4-methyl-pentanoyl]-4-methyl-4,6-bis(oxidanyl)azepan-3-yl]-1,3-dimethyl-purine-2,6-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H32 N6 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-09-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        436.505 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1IO0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9GUE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1IO0 C30  C1  C 0 1 N N N N N N 82.992 -31.592 20.457 4.519  -1.563 0.770  C30  A1IO0 1  
A1IO0 C31  C2  C 0 1 N N N N N N 84.792 -26.423 17.650 -2.915 -2.071 -2.060 C31  A1IO0 2  
A1IO0 N11  N1  N 0 1 N N N N N N 83.636 -29.567 15.808 -2.081 -1.585 1.492  N11  A1IO0 3  
A1IO0 C29  C3  C 0 1 N N N N N N 86.822 -31.255 20.143 1.928  -0.538 -1.731 C29  A1IO0 4  
A1IO0 C28  C4  C 0 1 N N N N N N 90.155 -34.968 18.023 -1.655 3.224  2.102  C28  A1IO0 5  
A1IO0 C23  C5  C 0 1 N N S N N N 88.571 -33.754 20.056 -0.711 2.102  -1.309 C23  A1IO0 6  
A1IO0 C25  C6  C 0 1 N N N N N N 89.670 -32.871 19.420 -1.346 1.825  0.056  C25  A1IO0 7  
A1IO0 C26  C7  C 0 1 N N N N N N 90.760 -33.710 18.697 -1.956 3.116  0.606  C26  A1IO0 8  
A1IO0 C27  C8  C 0 1 N N N N N N 91.550 -32.822 17.717 -3.470 3.098  0.390  C27  A1IO0 9  
A1IO0 C17  C9  C 0 1 N N R N N N 85.774 -30.393 22.872 1.962  1.328  0.816  C17  A1IO0 10 
A1IO0 C19  C10 C 0 1 N N N N N N 86.837 -31.532 22.784 1.992  1.743  -0.636 C19  A1IO0 11 
A1IO0 C21  C11 C 0 1 N N N N N N 88.048 -33.110 21.358 0.032  0.877  -1.775 C21  A1IO0 12 
A1IO0 C16  C12 C 0 1 N N N N N N 84.592 -30.426 21.881 3.185  0.498  1.204  C16  A1IO0 13 
A1IO0 C12  C13 C 0 1 N N N N N N 83.000 -30.034 14.606 -2.802 -1.527 2.766  C12  A1IO0 14 
A1IO0 C13  C14 C 0 1 N N S N N N 85.457 -31.888 19.858 2.391  -1.279 -0.449 C13  A1IO0 15 
A1IO0 C14  C15 C 0 1 N N S N N N 84.431 -31.693 21.011 3.571  -0.542 0.137  C14  A1IO0 16 
A1IO0 C10  C16 C 0 1 Y N N N N N 84.036 -30.610 16.768 -0.704 -1.436 1.469  C10  A1IO0 17 
A1IO0 C02  C17 C 0 1 N N N N N N 83.893 -28.163 16.100 -2.758 -1.788 0.346  C02  A1IO0 18 
A1IO0 C04  C18 C 0 1 N N N N N N 84.921 -28.842 18.289 -0.793 -1.704 -0.930 C04  A1IO0 19 
A1IO0 C06  C19 C 0 1 Y N N N N N 84.645 -30.318 17.949 -0.044 -1.495 0.248  C06  A1IO0 20 
A1IO0 C08  C20 C 0 1 Y N N N N N 84.401 -32.504 17.768 1.406  -1.158 1.859  C08  A1IO0 21 
A1IO0 N03  N2  N 0 1 N N N N N N 84.533 -27.821 17.350 -2.131 -1.853 -0.841 N03  A1IO0 22 
A1IO0 N07  N3  N 0 1 Y N N N N N 84.857 -31.520 18.562 1.296  -1.308 0.524  N07  A1IO0 23 
A1IO0 N09  N4  N 0 1 Y N N N N N 83.881 -31.929 16.655 0.221  -1.232 2.410  N09  A1IO0 24 
A1IO0 N20  N5  N 0 1 N N N N N N 87.208 -31.877 21.416 1.309  0.677  -1.392 N20  A1IO0 25 
A1IO0 N24  N6  N 0 1 N N N N N N 87.509 -33.996 19.102 -1.762 2.437  -2.279 N24  A1IO0 26 
A1IO0 O01  O1  O 0 1 N N N N N N 83.577 -27.321 15.320 -3.966 -1.917 0.386  O01  A1IO0 27 
A1IO0 O05  O2  O 0 1 N N N N N N 85.442 -28.548 19.300 -0.238 -1.749 -2.013 O05  A1IO0 28 
A1IO0 O15  O3  O 0 1 N N N N N N 84.477 -32.789 21.885 4.262  0.127  -0.920 O15  A1IO0 29 
A1IO0 O18  O4  O 0 1 N N N N N N 85.258 -30.410 24.181 1.921  2.501  1.630  O18  A1IO0 30 
A1IO0 O22  O5  O 0 1 N N N N N N 88.329 -33.607 22.389 -0.518 0.071  -2.495 O22  A1IO0 31 
A1IO0 H301 H1  H 0 0 N N N N N N 82.287 -31.455 21.290 4.019  -2.055 1.604  H301 A1IO0 32 
A1IO0 H303 H2  H 0 0 N N N N N N 82.922 -30.734 19.772 4.801  -2.307 0.025  H303 A1IO0 33 
A1IO0 H302 H3  H 0 0 N N N N N N 82.743 -32.516 19.914 5.412  -1.053 1.131  H302 A1IO0 34 
A1IO0 H312 H4  H 0 0 N N N N N N 85.280 -26.343 18.633 -2.990 -3.140 -2.257 H312 A1IO0 35 
A1IO0 H311 H5  H 0 0 N N N N N N 85.450 -25.998 16.878 -3.914 -1.655 -1.928 H311 A1IO0 36 
A1IO0 H313 H6  H 0 0 N N N N N N 83.842 -25.869 17.666 -2.424 -1.579 -2.900 H313 A1IO0 37 
A1IO0 H292 H7  H 0 0 N N N N N N 86.739 -30.163 20.244 2.792  -0.338 -2.365 H292 A1IO0 38 
A1IO0 H291 H8  H 0 0 N N N N N N 87.544 -31.496 19.349 1.220  -1.165 -2.273 H291 A1IO0 39 
A1IO0 H283 H9  H 0 0 N N N N N N 90.953 -35.536 17.522 -0.576 3.237  2.256  H283 A1IO0 40 
A1IO0 H282 H10 H 0 0 N N N N N N 89.679 -35.600 18.787 -2.089 4.144  2.495  H282 A1IO0 41 
A1IO0 H281 H11 H 0 0 N N N N N N 89.403 -34.661 17.281 -2.086 2.368  2.622  H281 A1IO0 42 
A1IO0 H231 H12 H 0 0 N N N N N N 89.032 -34.716 20.324 -0.017 2.938  -1.223 H231 A1IO0 43 
A1IO0 H252 H13 H 0 0 N N N N N N 89.201 -32.196 18.689 -2.127 1.072  -0.053 H252 A1IO0 44 
A1IO0 H251 H14 H 0 0 N N N N N N 90.149 -32.278 20.213 -0.584 1.461  0.744  H251 A1IO0 45 
A1IO0 H261 H15 H 0 0 N N N N N N 91.465 -34.059 19.466 -1.525 3.972  0.086  H261 A1IO0 46 
A1IO0 H272 H16 H 0 0 N N N N N N 92.318 -33.426 17.212 -3.685 3.137  -0.678 H272 A1IO0 47 
A1IO0 H271 H17 H 0 0 N N N N N N 90.863 -32.401 16.968 -3.886 2.182  0.811  H271 A1IO0 48 
A1IO0 H273 H18 H 0 0 N N N N N N 92.033 -32.004 18.272 -3.918 3.961  0.883  H273 A1IO0 49 
A1IO0 H171 H19 H 0 0 N N N N N N 86.306 -29.444 22.711 1.063  0.740  0.998  H171 A1IO0 50 
A1IO0 H192 H20 H 0 0 N N N N N N 87.742 -31.206 23.318 1.465  2.688  -0.765 H192 A1IO0 51 
A1IO0 H191 H21 H 0 0 N N N N N N 86.427 -32.429 23.270 3.023  1.841  -0.976 H191 A1IO0 52 
A1IO0 H161 H22 H 0 0 N N N N N N 83.668 -30.307 22.465 4.030  1.169  1.360  H161 A1IO0 53 
A1IO0 H162 H23 H 0 0 N N N N N N 84.708 -29.570 21.200 2.975  -0.021 2.139  H162 A1IO0 54 
A1IO0 H122 H24 H 0 0 N N N N N N 82.746 -29.175 13.967 -3.092 -0.497 2.973  H122 A1IO0 55 
A1IO0 H121 H25 H 0 0 N N N N N N 83.685 -30.703 14.065 -3.693 -2.151 2.708  H121 A1IO0 56 
A1IO0 H123 H26 H 0 0 N N N N N N 82.082 -30.581 14.866 -2.156 -1.890 3.566  H123 A1IO0 57 
A1IO0 H131 H27 H 0 0 N N N N N N 85.639 -32.972 19.813 2.682  -2.299 -0.701 H131 A1IO0 58 
A1IO0 H081 H28 H 0 0 N N N N N N 84.441 -33.563 17.978 2.331  -0.994 2.392  H081 A1IO0 59 
A1IO0 H242 H29 H 0 0 N N N N N N 87.890 -34.412 18.277 -2.628 1.974  -2.047 H242 A1IO0 60 
A1IO0 H1   H30 H 0 1 N N N N N N 86.833 -34.613 19.505 -1.891 3.435  -2.343 H1   A1IO0 61 
A1IO0 H151 H32 H 0 0 N N N N N N 83.848 -32.662 22.586 5.054  0.601  -0.633 H151 A1IO0 62 
A1IO0 H181 H33 H 0 0 N N N N N N 85.974 -30.390 24.805 1.171  3.083  1.445  H181 A1IO0 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1IO0 C02 O01  DOUB N N 1  
A1IO0 N03 C02  SING N N 2  
A1IO0 O05 C04  DOUB N N 3  
A1IO0 C06 C04  SING N N 4  
A1IO0 N07 C06  SING Y N 5  
A1IO0 N09 C08  DOUB Y N 6  
A1IO0 C10 N09  SING Y N 7  
A1IO0 N11 C10  SING N N 8  
A1IO0 C12 N11  SING N N 9  
A1IO0 C08 N07  SING Y N 10 
A1IO0 C13 N07  SING N N 11 
A1IO0 C14 C13  SING N N 12 
A1IO0 O15 C14  SING N N 13 
A1IO0 C17 C16  SING N N 14 
A1IO0 O18 C17  SING N N 15 
A1IO0 C19 C17  SING N N 16 
A1IO0 N20 C19  SING N N 17 
A1IO0 O22 C21  DOUB N N 18 
A1IO0 C23 C21  SING N N 19 
A1IO0 N24 C23  SING N N 20 
A1IO0 C25 C23  SING N N 21 
A1IO0 C26 C25  SING N N 22 
A1IO0 C27 C26  SING N N 23 
A1IO0 C28 C26  SING N N 24 
A1IO0 C21 N20  SING N N 25 
A1IO0 C29 N20  SING N N 26 
A1IO0 C16 C14  SING N N 27 
A1IO0 C30 C14  SING N N 28 
A1IO0 C04 N03  SING N N 29 
A1IO0 C31 N03  SING N N 30 
A1IO0 C02 N11  SING N N 31 
A1IO0 C06 C10  DOUB Y N 32 
A1IO0 C13 C29  SING N N 33 
A1IO0 C30 H301 SING N N 34 
A1IO0 C30 H303 SING N N 35 
A1IO0 C30 H302 SING N N 36 
A1IO0 C31 H312 SING N N 37 
A1IO0 C31 H311 SING N N 38 
A1IO0 C31 H313 SING N N 39 
A1IO0 C29 H292 SING N N 40 
A1IO0 C29 H291 SING N N 41 
A1IO0 C28 H283 SING N N 42 
A1IO0 C28 H282 SING N N 43 
A1IO0 C28 H281 SING N N 44 
A1IO0 C23 H231 SING N N 45 
A1IO0 C25 H252 SING N N 46 
A1IO0 C25 H251 SING N N 47 
A1IO0 C26 H261 SING N N 48 
A1IO0 C27 H272 SING N N 49 
A1IO0 C27 H271 SING N N 50 
A1IO0 C27 H273 SING N N 51 
A1IO0 C17 H171 SING N N 52 
A1IO0 C19 H192 SING N N 53 
A1IO0 C19 H191 SING N N 54 
A1IO0 C16 H161 SING N N 55 
A1IO0 C16 H162 SING N N 56 
A1IO0 C12 H122 SING N N 57 
A1IO0 C12 H121 SING N N 58 
A1IO0 C12 H123 SING N N 59 
A1IO0 C13 H131 SING N N 60 
A1IO0 C08 H081 SING N N 61 
A1IO0 N24 H242 SING N N 62 
A1IO0 N24 H1   SING N N 63 
A1IO0 O15 H151 SING N N 64 
A1IO0 O18 H181 SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1IO0 InChI            InChI                1.06  "InChI=1S/C20H32N6O5/c1-11(2)6-13(21)17(28)25-8-12(27)7-20(3,31)14(9-25)26-10-22-16-15(26)18(29)24(5)19(30)23(16)4/h10-14,27,31H,6-9,21H2,1-5H3/t12-,13+,14+,20+/m1/s1" 
A1IO0 InChIKey         InChI                1.06  FFMPXKQMGDIWEU-HFUQMLBGSA-N                                                                                                                                             
A1IO0 SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](N)C(=O)N1C[C@H](O)C[C@](C)(O)[C@H](C1)n2cnc3N(C)C(=O)N(C)C(=O)c23"                                                                                         
A1IO0 SMILES           CACTVS               3.385 "CC(C)C[CH](N)C(=O)N1C[CH](O)C[C](C)(O)[CH](C1)n2cnc3N(C)C(=O)N(C)C(=O)c23"                                                                                             
A1IO0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N1C[C@@H](C[C@]([C@H](C1)n2cnc3c2C(=O)N(C(=O)N3C)C)(C)O)O)N"                                                                                         
A1IO0 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)N1CC(CC(C(C1)n2cnc3c2C(=O)N(C(=O)N3C)C)(C)O)O)N"                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           A1IO0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "7-[(3~{S},4~{S},6~{R})-1-[(2~{S})-2-azanyl-4-methyl-pentanoyl]-4-methyl-4,6-bis(oxidanyl)azepan-3-yl]-1,3-dimethyl-purine-2,6-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1IO0 "Create component" 2024-09-19 PDBE 
A1IO0 "Initial release"  2024-10-02 RCSB 
# 
