data_DV0
#

_chem_comp.id                                   DV0
_chem_comp.name                                 "1-[(5~{R},8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-5-methyl-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H52 N10 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-09-03
_chem_comp.pdbx_modified_date                   2020-06-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       644.809
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DV0
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6KK6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DV0  C10  C1   C  0  1  N  N  R   6.565  -13.006   5.465    2.413   3.902   0.521  C10  DV0   1  
DV0  C15  C2   C  0  1  N  N  N   5.624  -13.605   6.571    1.485   5.055   0.135  C15  DV0   2  
DV0  C17  C3   C  0  1  N  N  N   3.417  -14.715   7.007   -0.759   4.032  -0.266  C17  DV0   3  
DV0  C20  C4   C  0  1  N  N  N   1.799  -14.829   4.049   -3.036   1.803   0.106  C20  DV0   4  
DV0  C22  C5   C  0  1  N  N  S   1.060  -13.796   3.244   -3.762   0.664  -0.562  C22  DV0   5  
DV0  C24  C6   C  0  1  N  N  N  -0.114  -13.452   1.005   -6.010  -0.253  -1.153  C24  DV0   6  
DV0  C26  C7   C  0  1  N  N  N  -1.920  -11.846   0.441   -8.257  -1.171  -1.745  C26  DV0   7  
DV0  C01  C8   C  0  1  Y  N  N  10.203  -11.234   1.063    5.096  -4.269   0.148  C01  DV0   8  
DV0  C02  C9   C  0  1  Y  N  N   9.586  -12.478   1.243    4.562  -3.126  -0.416  C02  DV0   9  
DV0  C03  C10  C  0  1  N  N  N  10.399  -13.704   1.641    5.364  -1.850  -0.438  C03  DV0  10  
DV0  C05  C11  C  0  1  N  N  N   9.388  -15.569   2.972    4.703   0.463  -0.426  C05  DV0  11  
DV0  C06  C12  C  0  1  N  N  R   8.853  -15.977   4.342    3.908   1.625   0.113  C06  DV0  12  
DV0  C07  C13  C  0  1  N  N  N   9.909  -16.609   5.224    4.044   1.676   1.636  C07  DV0  13  
DV0  C09  C14  C  0  1  N  N  N   7.157  -14.162   4.632    3.691   3.999  -0.271  C09  DV0  14  
DV0  C12  C15  C  0  1  N  N  N   8.407  -11.336   5.507    1.371   2.329  -1.057  C12  DV0  15  
DV0  C16  C16  C  0  1  N  N  N   4.445  -14.370   5.882    0.097   4.815   0.732  C16  DV0  16  
DV0  C18  C17  C  0  1  N  N  N   2.268  -15.548   6.411   -2.224   4.076   0.172  C18  DV0  17  
DV0  C23  C18  C  0  1  N  N  N   0.451  -14.453   2.011   -5.271   0.834  -0.371  C23  DV0  18  
DV0  C25  C19  C  0  1  N  N  N  -1.431  -12.824   1.501   -7.518  -0.083  -0.962  C25  DV0  19  
DV0  C29  C20  C  0  1  N  N  N   1.925  -11.468   3.221   -2.428  -1.337  -0.677  C29  DV0  20  
DV0  C31  C21  C  0  1  N  N  S   2.896  -10.469   2.615   -1.915  -2.635  -0.108  C31  DV0  21  
DV0  C32  C22  C  0  1  N  N  N   1.952   -9.531   1.777   -1.172  -2.362   1.201  C32  DV0  22  
DV0  C33  C23  C  0  1  N  N  N   2.724   -8.350   1.240   -2.080  -1.576   2.149  C33  DV0  23  
DV0  C34  C24  C  0  1  N  N  N   1.669   -7.441   0.524   -1.399  -1.438   3.512  C34  DV0  24  
DV0  C35  C25  C  0  1  N  N  N   2.370   -6.269  -0.142   -2.307  -0.652   4.459  C35  DV0  25  
DV0  C38  C26  C  0  1  N  N  N   5.135  -11.285   1.806    0.198  -3.699  -0.596  C38  DV0  26  
DV0  C40  C27  C  0  1  N  N  N   5.959  -11.729   0.593    1.173  -4.353  -1.540  C40  DV0  27  
DV0  C41  C28  C  0  1  Y  N  N   7.462  -11.484   0.753    2.556  -4.323  -0.943  C41  DV0  28  
DV0  C42  C29  C  0  1  Y  N  N   8.205  -12.584   1.100    3.291  -3.153  -0.962  C42  DV0  29  
DV0  C43  C30  C  0  1  Y  N  N   8.070  -10.233   0.514    3.091  -5.466  -0.378  C43  DV0  30  
DV0  C44  C31  C  0  1  Y  N  N   9.452  -10.128   0.640    4.361  -5.439   0.167  C44  DV0  31  
DV0  N04  N1   N  0  1  N  N  N   9.886  -14.261   2.920    4.544  -0.766   0.149  N04  DV0  32  
DV0  N08  N2   N  0  1  N  N  N   8.304  -14.805   5.121    4.431   2.874  -0.474  N08  DV0  33  
DV0  N11  N3   N  0  1  N  N  N   7.604  -12.272   6.178    1.754   2.626   0.229  N11  DV0  34  
DV0  N13  N4   N  0  1  N  N  N   8.254  -11.049   4.267    1.686   3.133  -2.033  N13  DV0  35  
DV0  N14  N5   N  0  1  N  N  N   9.406  -10.748   6.369    0.657   1.183  -1.314  N14  DV0  36  
DV0  N19  N6   N  0  1  N  N  N   1.588  -14.643   5.430   -2.963   3.006  -0.528  N19  DV0  37  
DV0  N27  N7   N  0  1  N  N  N  -3.253  -11.336   0.751   -9.706  -1.007  -1.561  N27  DV0  38  
DV0  N28  N8   N  0  1  N  N  N   2.021  -12.794   2.821   -3.318  -0.605   0.058  N28  DV0  39  
DV0  N36  N9   N  0  1  N  N  N   1.370   -5.489  -0.860   -1.653  -0.521   5.768  N36  DV0  40  
DV0  N37  N10  N  0  1  N  N  N   3.759  -11.035   1.542   -0.994  -3.254  -1.081  N37  DV0  41  
DV0  O21  O1   O  0  1  N  N  N   2.489  -15.751   3.639   -2.522   1.650   1.194  O21  DV0  42  
DV0  O30  O2   O  0  1  N  N  N   1.090  -11.129   4.034   -2.058  -0.949  -1.765  O30  DV0  43  
DV0  O39  O3   O  0  1  N  N  N   5.640  -11.097   2.840    0.470  -3.571   0.579  O39  DV0  44  
DV0  O45  O4   O  0  1  N  N  N   6.636  -14.480   3.571    4.056   5.064  -0.721  O45  DV0  45  
DV0  O46  O5   O  0  1  N  N  N   9.401  -16.338   2.032    5.469   0.617  -1.354  O46  DV0  46  
DV0  H1   H1   H  0  1  N  N  N   5.985  -12.336   4.814    2.640   3.959   1.586  H1   DV0  47  
DV0  H2   H2   H  0  1  N  N  N   6.195  -14.301   7.203    1.889   5.991   0.521  H2   DV0  48  
DV0  H3   H3   H  0  1  N  N  N   5.222  -12.791   7.192    1.408   5.113  -0.950  H3   DV0  49  
DV0  H4   H4   H  0  1  N  N  N   3.918  -15.293   7.797   -0.662   4.478  -1.256  H4   DV0  50  
DV0  H5   H5   H  0  1  N  N  N   3.013  -13.785   7.433   -0.421   2.996  -0.300  H5   DV0  51  
DV0  H6   H6   H  0  1  N  N  N   0.265  -13.341   3.854   -3.527   0.653  -1.626  H6   DV0  52  
DV0  H7   H7   H  0  1  N  N  N  -0.303  -13.971   0.054   -5.766  -0.168  -2.212  H7   DV0  53  
DV0  H8   H8   H  0  1  N  N  N   0.624  -12.652   0.846   -5.706  -1.234  -0.788  H8   DV0  54  
DV0  H9   H9   H  0  1  N  N  N  -1.952  -12.360  -0.531   -8.014  -1.085  -2.804  H9   DV0  55  
DV0  H10  H10  H  0  1  N  N  N  -1.219  -11.000   0.385   -7.953  -2.151  -1.380  H10  DV0  56  
DV0  H11  H11  H  0  1  N  N  N  11.261  -11.126   1.251    6.088  -4.248   0.574  H11  DV0  57  
DV0  H12  H12  H  0  1  N  N  N  10.317  -14.467   0.853    6.273  -1.980   0.149  H12  DV0  58  
DV0  H13  H13  H  0  1  N  N  N  11.454  -13.417   1.766    5.622  -1.598  -1.466  H13  DV0  59  
DV0  H14  H14  H  0  1  N  N  N   8.043  -16.706   4.193    2.859   1.506  -0.158  H14  DV0  60  
DV0  H15  H15  H  0  1  N  N  N   9.464  -16.880   6.193    5.079   1.893   1.901  H15  DV0  61  
DV0  H16  H16  H  0  1  N  N  N  10.302  -17.513   4.735    3.396   2.458   2.032  H16  DV0  62  
DV0  H17  H17  H  0  1  N  N  N  10.729  -15.893   5.384    3.754   0.715   2.059  H17  DV0  63  
DV0  H18  H18  H  0  1  N  N  N   3.973  -13.733   5.120    0.192   4.243   1.655  H18  DV0  64  
DV0  H19  H19  H  0  1  N  N  N   4.815  -15.292   5.411   -0.378   5.772   0.945  H19  DV0  65  
DV0  H20  H20  H  0  1  N  N  N   1.567  -15.856   7.200   -2.288   3.920   1.249  H20  DV0  66  
DV0  H21  H21  H  0  1  N  N  N   2.663  -16.440   5.902   -2.653   5.045  -0.083  H21  DV0  67  
DV0  H22  H22  H  0  1  N  N  N  -0.363  -15.117   2.336   -5.515   0.748   0.688  H22  DV0  68  
DV0  H23  H23  H  0  1  N  N  N   1.231  -15.047   1.511   -5.575   1.815  -0.736  H23  DV0  69  
DV0  H24  H24  H  0  1  N  N  N  -1.256  -12.291   2.447   -7.762  -0.169   0.097  H24  DV0  70  
DV0  H25  H25  H  0  1  N  N  N  -2.183  -13.611   1.657   -7.823   0.898  -1.327  H25  DV0  71  
DV0  H26  H26  H  0  1  N  N  N   3.460   -9.910   3.376   -2.752  -3.307   0.081  H26  DV0  72  
DV0  H27  H27  H  0  1  N  N  N   1.137   -9.169   2.421   -0.894  -3.308   1.666  H27  DV0  73  
DV0  H28  H28  H  0  1  N  N  N   1.529  -10.100   0.936   -0.273  -1.781   0.995  H28  DV0  74  
DV0  H29  H29  H  0  1  N  N  N   3.489   -8.686   0.524   -2.267  -0.585   1.735  H29  DV0  75  
DV0  H30  H30  H  0  1  N  N  N   3.207   -7.802   2.062   -3.026  -2.105   2.267  H30  DV0  76  
DV0  H31  H31  H  0  1  N  N  N   0.949   -7.063   1.265   -1.212  -2.429   3.926  H31  DV0  77  
DV0  H32  H32  H  0  1  N  N  N   1.137   -8.029  -0.238   -0.453  -0.910   3.393  H32  DV0  78  
DV0  H33  H33  H  0  1  N  N  N   3.129   -6.640  -0.846   -2.494   0.338   4.045  H33  DV0  79  
DV0  H34  H34  H  0  1  N  N  N   2.854   -5.642   0.621   -3.253  -1.181   4.578  H34  DV0  80  
DV0  H35  H35  H  0  1  N  N  N   5.608  -11.173  -0.289    0.874  -5.388  -1.710  H35  DV0  81  
DV0  H36  H36  H  0  1  N  N  N   5.796  -12.806   0.437    1.176  -3.817  -2.488  H36  DV0  82  
DV0  H37  H37  H  0  1  N  N  N   7.718  -13.534   1.263    2.874  -2.259  -1.402  H37  DV0  83  
DV0  H38  H38  H  0  1  N  N  N   7.475   -9.375   0.239    2.515  -6.380  -0.362  H38  DV0  84  
DV0  H39  H39  H  0  1  N  N  N   9.946   -9.195   0.412    4.779  -6.333   0.607  H39  DV0  85  
DV0  H40  H40  H  0  1  N  N  N   9.896  -13.699   3.747    3.937  -0.917   0.890  H40  DV0  86  
DV0  H41  H41  H  0  1  N  N  N   8.746  -14.496   5.963    5.260   2.893  -0.977  H41  DV0  87  
DV0  H42  H42  H  0  1  N  N  N   7.746  -12.437   7.154    1.587   1.992   0.944  H42  DV0  88  
DV0  H43  H43  H  0  1  N  N  N   8.912  -10.363   3.957    1.480   2.888  -2.949  H43  DV0  89  
DV0  H44  H44  H  0  1  N  N  N   9.463  -11.024   7.329    0.423   0.584  -0.587  H44  DV0  90  
DV0  H45  H45  H  0  1  N  N  N  10.040  -10.065   6.006    0.387   0.973  -2.221  H45  DV0  91  
DV0  H46  H46  H  0  1  N  N  N   0.988  -13.911   5.753   -3.374   3.152  -1.394  H46  DV0  92  
DV0  H47  H47  H  0  1  N  N  N  -3.541  -10.699   0.036  -10.217  -1.714  -2.069  H47  DV0  93  
DV0  H48  H48  H  0  1  N  N  N  -3.899  -12.098   0.798   -9.950  -1.018  -0.582  H48  DV0  94  
DV0  H50  H50  H  0  1  N  N  N   2.775  -13.067   2.223   -3.637  -0.898   0.927  H50  DV0  95  
DV0  H51  H51  H  0  1  N  N  N   1.811   -4.711  -1.307   -0.744  -0.091   5.676  H51  DV0  96  
DV0  H52  H52  H  0  1  N  N  N   0.931   -6.064  -1.550   -2.233  -0.005   6.412  H52  DV0  97  
DV0  H54  H54  H  0  1  N  N  N   3.374  -11.238   0.642   -1.226  -3.341  -2.019  H54  DV0  98  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DV0  N36  C35  SING  N  N   1  
DV0  C35  C34  SING  N  N   2  
DV0  C26  N27  SING  N  N   3  
DV0  C26  C25  SING  N  N   4  
DV0  C43  C44  DOUB  Y  N   5  
DV0  C43  C41  SING  Y  N   6  
DV0  C34  C33  SING  N  N   7  
DV0  C40  C41  SING  N  N   8  
DV0  C40  C38  SING  N  N   9  
DV0  C44  C01  SING  Y  N  10  
DV0  C41  C42  DOUB  Y  N  11  
DV0  C24  C25  SING  N  N  12  
DV0  C24  C23  SING  N  N  13  
DV0  C01  C02  DOUB  Y  N  14  
DV0  C42  C02  SING  Y  N  15  
DV0  C33  C32  SING  N  N  16  
DV0  C02  C03  SING  N  N  17  
DV0  N37  C38  SING  N  N  18  
DV0  N37  C31  SING  N  N  19  
DV0  C03  N04  SING  N  N  20  
DV0  C32  C31  SING  N  N  21  
DV0  C38  O39  DOUB  N  N  22  
DV0  C23  C22  SING  N  N  23  
DV0  O46  C05  DOUB  N  N  24  
DV0  C31  C29  SING  N  N  25  
DV0  N28  C29  SING  N  N  26  
DV0  N28  C22  SING  N  N  27  
DV0  N04  C05  SING  N  N  28  
DV0  C05  C06  SING  N  N  29  
DV0  C29  O30  DOUB  N  N  30  
DV0  C22  C20  SING  N  N  31  
DV0  O45  C09  DOUB  N  N  32  
DV0  O21  C20  DOUB  N  N  33  
DV0  C20  N19  SING  N  N  34  
DV0  N13  C12  DOUB  N  N  35  
DV0  C06  N08  SING  N  N  36  
DV0  C06  C07  SING  N  N  37  
DV0  C09  N08  SING  N  N  38  
DV0  C09  C10  SING  N  N  39  
DV0  N19  C18  SING  N  N  40  
DV0  C10  N11  SING  N  N  41  
DV0  C10  C15  SING  N  N  42  
DV0  C12  N11  SING  N  N  43  
DV0  C12  N14  SING  N  N  44  
DV0  C16  C15  SING  N  N  45  
DV0  C16  C17  SING  N  N  46  
DV0  C18  C17  SING  N  N  47  
DV0  C10  H1   SING  N  N  48  
DV0  C15  H2   SING  N  N  49  
DV0  C15  H3   SING  N  N  50  
DV0  C17  H4   SING  N  N  51  
DV0  C17  H5   SING  N  N  52  
DV0  C22  H6   SING  N  N  53  
DV0  C24  H7   SING  N  N  54  
DV0  C24  H8   SING  N  N  55  
DV0  C26  H9   SING  N  N  56  
DV0  C26  H10  SING  N  N  57  
DV0  C01  H11  SING  N  N  58  
DV0  C03  H12  SING  N  N  59  
DV0  C03  H13  SING  N  N  60  
DV0  C06  H14  SING  N  N  61  
DV0  C07  H15  SING  N  N  62  
DV0  C07  H16  SING  N  N  63  
DV0  C07  H17  SING  N  N  64  
DV0  C16  H18  SING  N  N  65  
DV0  C16  H19  SING  N  N  66  
DV0  C18  H20  SING  N  N  67  
DV0  C18  H21  SING  N  N  68  
DV0  C23  H22  SING  N  N  69  
DV0  C23  H23  SING  N  N  70  
DV0  C25  H24  SING  N  N  71  
DV0  C25  H25  SING  N  N  72  
DV0  C31  H26  SING  N  N  73  
DV0  C32  H27  SING  N  N  74  
DV0  C32  H28  SING  N  N  75  
DV0  C33  H29  SING  N  N  76  
DV0  C33  H30  SING  N  N  77  
DV0  C34  H31  SING  N  N  78  
DV0  C34  H32  SING  N  N  79  
DV0  C35  H33  SING  N  N  80  
DV0  C35  H34  SING  N  N  81  
DV0  C40  H35  SING  N  N  82  
DV0  C40  H36  SING  N  N  83  
DV0  C42  H37  SING  N  N  84  
DV0  C43  H38  SING  N  N  85  
DV0  C44  H39  SING  N  N  86  
DV0  N04  H40  SING  N  N  87  
DV0  N08  H41  SING  N  N  88  
DV0  N11  H42  SING  N  N  89  
DV0  N13  H43  SING  N  N  90  
DV0  N14  H44  SING  N  N  91  
DV0  N14  H45  SING  N  N  92  
DV0  N19  H46  SING  N  N  93  
DV0  N27  H47  SING  N  N  94  
DV0  N27  H48  SING  N  N  95  
DV0  N28  H50  SING  N  N  96  
DV0  N36  H51  SING  N  N  97  
DV0  N36  H52  SING  N  N  98  
DV0  N37  H54  SING  N  N  99  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DV0  InChI             InChI                 1.03   "InChI=1S/C31H52N10O5/c1-20-27(43)37-19-22-10-8-9-21(17-22)18-26(42)39-24(12-3-6-15-33)30(46)40-23(11-2-5-14-32)28(44)36-16-7-4-13-25(29(45)38-20)41-31(34)35/h8-10,17,20,23-25H,2-7,11-16,18-19,32-33H2,1H3,(H,36,44)(H,37,43)(H,38,45)(H,39,42)(H,40,46)(H4,34,35,41)/t20-,23+,24+,25-/m1/s1"  
DV0  InChIKey          InChI                 1.03   WUGZEUIQIOXIIV-AKAGGGOCSA-N  
DV0  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1NC(=O)[C@@H](CCCCNC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)Cc2cccc(CNC1=O)c2)NC(N)=N"  
DV0  SMILES            CACTVS                3.385  "C[CH]1NC(=O)[CH](CCCCNC(=O)[CH](CCCCN)NC(=O)[CH](CCCCN)NC(=O)Cc2cccc(CNC1=O)c2)NC(N)=N"  
DV0  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[H]/N=C(/N)\N[C@@H]1CCCCNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)Cc2cccc(c2)CNC(=O)[C@H](NC1=O)C)CCCCN)CCCCN"  
DV0  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1C(=O)NCc2cccc(c2)CC(=O)NC(C(=O)NC(C(=O)NCCCCC(C(=O)N1)NC(=N)N)CCCCN)CCCCN"  
#
_pdbx_chem_comp_identifier.comp_id          DV0
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-[(5~{R},8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-5-methyl-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DV0  "Create component"  2019-09-03  PDBJ  
DV0  "Initial release"   2020-06-17  RCSB  
##
