data_WB0
# 
_chem_comp.id                                    WB0 
_chem_comp.name                                  "2-cyano-D-phenylalanyl-2,4-dichloro-N-[(2S)-1-(4-fluorophenyl)-4-(methylamino)-4-oxobutan-2-yl]-D-phenylalaninamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H30 Cl2 F N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-29 
_chem_comp.pdbx_modified_date                    2024-12-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        598.495 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WB0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8UDF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WB0 O3  O1  O  0 1 N N N N N N -7.899  7.378  66.045 -5.570 3.102  0.594  O3  WB0 1  
WB0 C27 C1  C  0 1 Y N N N N N -8.945  11.016 63.584 6.762  4.089  -1.380 C27 WB0 2  
WB0 O2  O2  O  0 1 N N N N N N -8.854  10.953 68.437 -1.363 1.620  -0.146 O2  WB0 3  
WB0 C25 C2  C  0 1 Y N N N N N -10.982 12.275 63.627 4.443  3.462  -1.334 C25 WB0 4  
WB0 C26 C3  C  0 1 Y N N N N N -10.271 11.160 63.199 5.513  4.100  -1.966 C26 WB0 5  
WB0 C24 C4  C  0 1 Y N N N N N -10.396 13.243 64.436 4.644  2.827  -0.107 C24 WB0 6  
WB0 C23 C5  C  0 1 N N N N N N -11.214 14.437 64.861 3.496  2.136  0.583  C23 WB0 7  
WB0 C22 C6  C  0 1 N N R N N N -10.979 14.797 66.306 3.354  0.714  0.036  C22 WB0 8  
WB0 C20 C7  C  0 1 Y N N N N N -11.510 14.620 70.896 0.517  -3.492 1.460  C20 WB0 9  
WB0 C21 C8  C  0 1 N N N N N N -11.390 13.625 67.166 2.132  0.066  0.636  C21 WB0 10 
WB0 C17 C9  C  0 1 Y N N N N N -13.857 13.489 72.003 2.912  -3.303 0.088  C17 WB0 11 
WB0 C16 C10 C  0 1 Y N N N N N -12.843 12.682 71.508 1.857  -2.472 -0.244 C16 WB0 12 
WB0 C15 C11 C  0 1 Y N N N N N -11.682 13.239 70.961 0.659  -2.567 0.444  C15 WB0 13 
WB0 C14 C12 C  0 1 N N N N N N -10.595 12.353 70.421 -0.490 -1.661 0.083  C14 WB0 14 
WB0 C8  C13 C  0 1 Y N N N N N -9.200  7.033  72.014 -4.728 -2.815 -1.305 C8  WB0 15 
WB0 C7  C14 C  0 1 Y N N N N N -9.325  6.957  70.633 -4.667 -1.946 -0.232 C7  WB0 16 
WB0 C6  C15 C  0 1 Y N N N N N -10.492 7.396  70.015 -5.205 -0.677 -0.338 C6  WB0 17 
WB0 C13 C16 C  0 1 N N R N N N -10.897 12.048 68.976 -0.277 -0.287 0.721  C13 WB0 18 
WB0 C18 C17 C  0 1 Y N N N N N -13.733 14.864 71.956 2.769  -4.228 1.106  C18 WB0 19 
WB0 C12 C18 C  0 1 N N N N N N -10.082 10.858 68.549 -1.483 0.579  0.464  C12 WB0 20 
WB0 C11 C19 C  0 1 Y N N N N N -11.545 7.913  70.767 -5.804 -0.276 -1.518 C11 WB0 21 
WB0 C9  C20 C  0 1 Y N N N N N -10.336 7.591  72.813 -5.327 -2.414 -2.487 C9  WB0 22 
WB0 C10 C21 C  0 1 Y N N N N N -11.478 8.017  72.153 -5.865 -1.143 -2.592 C10 WB0 23 
WB0 C1  C22 C  0 1 N N N N N N -8.841  5.022  65.050 -6.252 5.074  2.301  C1  WB0 24 
WB0 C19 C23 C  0 1 Y N N N N N -12.496 15.473 71.372 1.571  -4.323 1.792  C19 WB0 25 
WB0 C5  C24 C  0 1 N N N N N N -10.617 7.313  68.520 -5.139 0.269  0.833  C5  WB0 26 
WB0 C4  C25 C  0 1 N N S N N N -9.968  8.513  67.893 -3.848 1.087  0.755  C4  WB0 27 
WB0 C3  C26 C  0 1 N N N N N N -10.011 8.387  66.393 -3.839 2.132  1.872  C3  WB0 28 
WB0 O1  O3  O  0 1 N N N N N N -12.460 13.051 66.957 2.249  -0.705 1.564  O1  WB0 29 
WB0 C2  C27 C  0 1 N N N N N N -9.124  7.259  65.957 -4.929 3.143  1.623  C2  WB0 30 
WB0 C28 C28 C  0 1 Y N N N N N -8.346  11.983 64.391 6.956  3.449  -0.169 C28 WB0 31 
WB0 C29 C29 C  0 1 Y N N N N N -9.068  13.095 64.813 5.900  2.820  0.465  C29 WB0 32 
WB0 C30 C30 C  0 1 N N N N N N -12.408 12.457 63.239 3.143  3.474  -1.934 C30 WB0 33 
WB0 CL1 CL1 CL 0 0 N N N N N N -15.015 15.844 72.575 4.092  -5.272 1.522  CL1 WB0 34 
WB0 CL2 CL2 CL 0 0 N N N N N N -13.081 10.967 71.582 2.035  -1.310 -1.521 CL2 WB0 35 
WB0 F1  F1  F  0 1 N N N N N N -10.250 7.679  74.156 -5.381 -3.260 -3.539 F1  WB0 36 
WB0 N1  N1  N  0 1 N N N N N N -9.674  6.141  65.480 -5.192 4.092  2.543  N1  WB0 37 
WB0 N2  N2  N  0 1 N N N N N N -10.704 9.707  68.298 -2.695 0.196  0.911  N2  WB0 38 
WB0 N3  N3  N  0 1 N N N N N N -10.565 13.194 68.127 0.910  0.343  0.139  N3  WB0 39 
WB0 N4  N4  N  0 1 N N N N N N -11.629 16.085 66.626 4.546  -0.068 0.390  N4  WB0 40 
WB0 N5  N5  N  0 1 N N N N N N -13.510 12.604 62.954 2.111  3.483  -2.409 N5  WB0 41 
WB0 H1  H1  H  0 1 N N N N N N -8.378  10.156 63.259 7.591  4.578  -1.871 H1  WB0 42 
WB0 H2  H2  H  0 1 N N N N N N -10.744 10.416 62.575 5.363  4.600  -2.911 H2  WB0 43 
WB0 H3  H3  H  0 1 N N N N N N -10.941 15.297 64.232 3.688  2.096  1.655  H3  WB0 44 
WB0 H4  H4  H  0 1 N N N N N N -12.280 14.205 64.722 2.575  2.690  0.398  H4  WB0 45 
WB0 H5  H5  H  0 1 N N N N N N -9.895  14.931 66.436 3.251  0.750  -1.048 H5  WB0 46 
WB0 H6  H6  H  0 1 N N N N N N -10.604 15.029 70.473 -0.416 -3.563 1.999  H6  WB0 47 
WB0 H7  H7  H  0 1 N N N N N N -14.745 13.042 72.426 3.846  -3.229 -0.449 H7  WB0 48 
WB0 H8  H8  H  0 1 N N N N N N -10.559 11.417 70.998 -0.542 -1.554 -1.001 H8  WB0 49 
WB0 H9  H9  H  0 1 N N N N N N -9.626  12.868 70.496 -1.421 -2.092 0.451  H9  WB0 50 
WB0 H10 H10 H  0 1 N N N N N N -8.298  6.695  72.503 -4.304 -3.805 -1.223 H10 WB0 51 
WB0 H11 H11 H  0 1 N N N N N N -8.517  6.557  70.039 -4.200 -2.259 0.690  H11 WB0 52 
WB0 H12 H12 H  0 1 N N N N N N -11.966 11.809 68.874 -0.136 -0.404 1.796  H12 WB0 53 
WB0 H13 H13 H  0 1 N N N N N N -12.439 8.243  70.259 -6.224 0.716  -1.599 H13 WB0 54 
WB0 H14 H14 H  0 1 N N N N N N -12.308 8.426  72.709 -6.333 -0.829 -3.513 H14 WB0 55 
WB0 H15 H15 H  0 1 N N N N N N -9.482  4.203  64.692 -6.317 5.755  3.150  H15 WB0 56 
WB0 H16 H16 H  0 1 N N N N N N -8.178  5.350  64.236 -6.023 5.640  1.398  H16 WB0 57 
WB0 H17 H17 H  0 1 N N N N N N -8.235  4.670  65.897 -7.203 4.558  2.176  H17 WB0 58 
WB0 H18 H18 H  0 1 N N N N N N -12.375 16.545 71.323 1.460  -5.045 2.587  H18 WB0 59 
WB0 H19 H19 H  0 1 N N N N N N -11.681 7.285  68.243 -5.997 0.940  0.806  H19 WB0 60 
WB0 H20 H20 H  0 1 N N N N N N -10.121 6.399  68.161 -5.152 -0.301 1.762  H20 WB0 61 
WB0 H21 H21 H  0 1 N N N N N N -8.922  8.582  68.226 -3.793 1.587  -0.211 H21 WB0 62 
WB0 H22 H22 H  0 1 N N N N N N -9.661  9.325  65.937 -4.011 1.642  2.830  H22 WB0 63 
WB0 H23 H23 H  0 1 N N N N N N -11.044 8.186  66.072 -2.873 2.637  1.890  H23 WB0 64 
WB0 H24 H24 H  0 1 N N N N N N -7.315  11.868 64.690 7.937  3.440  0.283  H24 WB0 65 
WB0 H25 H25 H  0 1 N N N N N N -8.596  13.842 65.433 6.056  2.329  1.414  H25 WB0 66 
WB0 H26 H26 H  0 1 N N N N N N -10.669 6.069  65.416 -4.680 4.124  3.366  H26 WB0 67 
WB0 H27 H27 H  0 1 N N N N N N -11.699 9.660  68.389 -2.805 -0.669 1.336  H27 WB0 68 
WB0 H28 H28 H  0 1 N N N N N N -9.696  13.668 68.270 0.817  0.960  -0.604 H28 WB0 69 
WB0 H29 H29 H  0 1 N N N N N N -11.466 16.312 67.586 4.663  -0.116 1.391  H29 WB0 70 
WB0 H30 H30 H  0 1 N N N N N N -11.248 16.804 66.044 4.506  -0.991 -0.015 H30 WB0 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WB0 N5  C30 TRIP N N 1  
WB0 C26 C27 DOUB Y N 2  
WB0 C26 C25 SING Y N 3  
WB0 C30 C25 SING N N 4  
WB0 C27 C28 SING Y N 5  
WB0 C25 C24 DOUB Y N 6  
WB0 C28 C29 DOUB Y N 7  
WB0 C24 C29 SING Y N 8  
WB0 C24 C23 SING N N 9  
WB0 C23 C22 SING N N 10 
WB0 C1  N1  SING N N 11 
WB0 N1  C2  SING N N 12 
WB0 C2  O3  DOUB N N 13 
WB0 C2  C3  SING N N 14 
WB0 C22 N4  SING N N 15 
WB0 C22 C21 SING N N 16 
WB0 C3  C4  SING N N 17 
WB0 O1  C21 DOUB N N 18 
WB0 C21 N3  SING N N 19 
WB0 C4  N2  SING N N 20 
WB0 C4  C5  SING N N 21 
WB0 N3  C13 SING N N 22 
WB0 N2  C12 SING N N 23 
WB0 O2  C12 DOUB N N 24 
WB0 C5  C6  SING N N 25 
WB0 C12 C13 SING N N 26 
WB0 C13 C14 SING N N 27 
WB0 C6  C7  DOUB Y N 28 
WB0 C6  C11 SING Y N 29 
WB0 C14 C15 SING N N 30 
WB0 C7  C8  SING Y N 31 
WB0 C11 C10 DOUB Y N 32 
WB0 C20 C15 DOUB Y N 33 
WB0 C20 C19 SING Y N 34 
WB0 C15 C16 SING Y N 35 
WB0 C19 C18 DOUB Y N 36 
WB0 C16 CL2 SING N N 37 
WB0 C16 C17 DOUB Y N 38 
WB0 C18 C17 SING Y N 39 
WB0 C18 CL1 SING N N 40 
WB0 C8  C9  DOUB Y N 41 
WB0 C10 C9  SING Y N 42 
WB0 C9  F1  SING N N 43 
WB0 C27 H1  SING N N 44 
WB0 C26 H2  SING N N 45 
WB0 C23 H3  SING N N 46 
WB0 C23 H4  SING N N 47 
WB0 C22 H5  SING N N 48 
WB0 C20 H6  SING N N 49 
WB0 C17 H7  SING N N 50 
WB0 C14 H8  SING N N 51 
WB0 C14 H9  SING N N 52 
WB0 C8  H10 SING N N 53 
WB0 C7  H11 SING N N 54 
WB0 C13 H12 SING N N 55 
WB0 C11 H13 SING N N 56 
WB0 C10 H14 SING N N 57 
WB0 C1  H15 SING N N 58 
WB0 C1  H16 SING N N 59 
WB0 C1  H17 SING N N 60 
WB0 C19 H18 SING N N 61 
WB0 C5  H19 SING N N 62 
WB0 C5  H20 SING N N 63 
WB0 C4  H21 SING N N 64 
WB0 C3  H22 SING N N 65 
WB0 C3  H23 SING N N 66 
WB0 C28 H24 SING N N 67 
WB0 C29 H25 SING N N 68 
WB0 N1  H26 SING N N 69 
WB0 N2  H27 SING N N 70 
WB0 N3  H28 SING N N 71 
WB0 N4  H29 SING N N 72 
WB0 N4  H30 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WB0 SMILES           ACDLabs              12.01 "Clc1cc(Cl)ccc1CC(NC(=O)C(N)Cc1ccccc1C#N)C(=O)NC(Cc1ccc(F)cc1)CC(=O)NC"                                                                                                                                                                   
WB0 InChI            InChI                1.06  "InChI=1S/C30H30Cl2FN5O3/c1-36-28(39)16-24(12-18-6-10-23(33)11-7-18)37-30(41)27(14-20-8-9-22(31)15-25(20)32)38-29(40)26(35)13-19-4-2-3-5-21(19)17-34/h2-11,15,24,26-27H,12-14,16,35H2,1H3,(H,36,39)(H,37,41)(H,38,40)/t24-,26+,27+/m0/s1" 
WB0 InChIKey         InChI                1.06  PTBCEVVQPWJWDW-WYMJOSIYSA-N                                                                                                                                                                                                               
WB0 SMILES_CANONICAL CACTVS               3.385 "CNC(=O)C[C@H](Cc1ccc(F)cc1)NC(=O)[C@@H](Cc2ccc(Cl)cc2Cl)NC(=O)[C@H](N)Cc3ccccc3C#N"                                                                                                                                                      
WB0 SMILES           CACTVS               3.385 "CNC(=O)C[CH](Cc1ccc(F)cc1)NC(=O)[CH](Cc2ccc(Cl)cc2Cl)NC(=O)[CH](N)Cc3ccccc3C#N"                                                                                                                                                          
WB0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)C[C@H](Cc1ccc(cc1)F)NC(=O)[C@@H](Cc2ccc(cc2Cl)Cl)NC(=O)[C@@H](Cc3ccccc3C#N)N"                                                                                                                                                     
WB0 SMILES           "OpenEye OEToolkits" 2.0.7 "CNC(=O)CC(Cc1ccc(cc1)F)NC(=O)C(Cc2ccc(cc2Cl)Cl)NC(=O)C(Cc3ccccc3C#N)N"                                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WB0 "SYSTEMATIC NAME" ACDLabs              12.01 "2-cyano-D-phenylalanyl-2,4-dichloro-N-[(2S)-1-(4-fluorophenyl)-4-(methylamino)-4-oxobutan-2-yl]-D-phenylalaninamide"                                         
WB0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-[[(2~{R})-2-[[(2~{R})-2-azanyl-3-(2-cyanophenyl)propanoyl]amino]-3-(2,4-dichlorophenyl)propanoyl]amino]-4-(4-fluorophenyl)-~{N}-methyl-butanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WB0 "Create component" 2023-09-29 RCSB 
WB0 "Initial release"  2024-12-25 RCSB 
# 
