data_YC0
# 
_chem_comp.id                                    YC0 
_chem_comp.name                                  "methyl (2~{S})-2-[[(2~{R},4~{a}~{S},6~{a}~{R},6~{a}~{S},14~{a}~{S},14~{b}~{R})-2,4~{a},6~{a},6~{a},9,14~{a}-hexamethyl-10-oxidanyl-11-oxidanylidene-1,3,4,5,6,13,14,14~{b}-octahydropicen-2-yl]carbamoylamino]-3-oxidanyl-propanoate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H46 N2 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-29 
_chem_comp.pdbx_modified_date                    2024-06-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        566.728 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YC0 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8X73 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YC0 C1  C1  C 0 1 N N N N N N -23.964 54.659 4.598 -4.913 2.233  -1.072 C1  YC0 1  
YC0 C10 C2  C 0 1 N N R N N N -27.756 56.165 5.337 -3.187 -0.684 0.734  C10 YC0 2  
YC0 C11 C3  C 0 1 N N S N N N -29.257 57.437 3.564 -1.719 -2.504 -0.419 C11 YC0 3  
YC0 C12 C4  C 0 1 N N S N N N -30.326 56.357 3.816 -0.564 -2.056 0.493  C12 YC0 4  
YC0 C13 C5  C 0 1 N N N N N N -30.242 55.915 5.252 -1.152 -1.692 1.862  C13 YC0 5  
YC0 C14 C6  C 0 1 N N N N N N -28.881 55.276 5.592 -2.073 -0.482 1.753  C14 YC0 6  
YC0 C15 C7  C 0 1 N N N N N N -29.369 57.784 2.093 -1.143 -2.829 -1.798 C15 YC0 7  
YC0 C16 C8  C 0 1 N N N N N N -30.705 58.429 1.761 -0.175 -4.002 -1.691 C16 YC0 8  
YC0 C17 C9  C 0 1 N N S N N N -31.957 57.679 2.228 0.948  -3.760 -0.686 C17 YC0 9  
YC0 C18 C10 C 0 1 N N R N N N -31.760 56.938 3.545 0.467  -3.153 0.620  C18 YC0 10 
YC0 C19 C11 C 0 1 N N N N N N -32.457 56.734 1.105 2.064  -2.939 -1.322 C19 YC0 11 
YC0 C2  C12 C 0 1 N N N N N N -25.251 55.563 4.457 -4.231 1.012  -0.857 C2  YC0 12 
YC0 C20 C13 C 0 1 N N N N N N -33.829 56.090 1.486 3.254  -2.849 -0.373 C20 YC0 13 
YC0 C21 C14 C 0 1 N N R N N N -33.666 55.162 2.662 2.861  -2.224 0.962  C21 YC0 14 
YC0 C22 C15 C 0 1 N N N N N N -32.871 55.867 3.827 1.613  -2.841 1.568  C22 YC0 15 
YC0 C23 C16 C 0 1 N N N N N N -22.760 54.900 3.672 -5.358 2.643  -2.453 C23 YC0 16 
YC0 C24 C17 C 0 1 N N N N N N -27.598 57.148 6.521 -4.269 -1.562 1.378  C24 YC0 17 
YC0 C25 C18 C 0 1 N N N N N N -29.540 58.761 4.346 -2.416 -3.748 0.125  C25 YC0 18 
YC0 C26 C19 C 0 1 N N N N N N -33.072 58.722 2.482 1.525  -5.162 -0.358 C26 YC0 19 
YC0 C27 C20 C 0 1 N N N N N N -29.992 55.144 2.931 0.026  -0.776 -0.108 C27 YC0 20 
YC0 C28 C21 C 0 1 N N N N N N -35.035 54.689 3.148 4.027  -2.509 1.945  C28 YC0 21 
YC0 C29 C22 C 0 1 N N N N N N -32.365 52.906 2.999 3.808  -0.067 0.353  C29 YC0 22 
YC0 C3  C23 C 0 1 N N N N N N -26.426 55.291 5.390 -3.863 0.635  0.456  C3  YC0 23 
YC0 C30 C24 C 0 1 N N S N N N -30.959 50.776 2.827 4.854  2.039  -0.289 C30 YC0 24 
YC0 C31 C25 C 0 1 N N N N N N -31.121 49.516 2.049 4.782  2.057  -1.817 C31 YC0 25 
YC0 C32 C26 C 0 1 N N N N N N -29.496 51.247 2.745 4.796  3.451  0.234  C32 YC0 26 
YC0 C33 C27 C 0 1 N N N N N N -27.364 51.686 3.748 5.618  5.680  0.417  C33 YC0 27 
YC0 C4  C28 C 0 1 N N N N N N -26.360 54.213 6.411 -4.123 1.469  1.497  C4  YC0 28 
YC0 C5  C29 C 0 1 N N N N N N -25.131 53.355 6.531 -4.772 2.699  1.280  C5  YC0 29 
YC0 C6  C30 C 0 1 N N N N N N -23.927 53.602 5.602 -5.175 3.062  -0.026 C6  YC0 30 
YC0 C7  C31 C 0 1 N N N N N N -25.348 56.620 3.489 -3.914 0.172  -1.925 C7  YC0 31 
YC0 C8  C32 C 0 1 N N N N N N -26.636 57.109 3.091 -3.079 -0.936 -1.729 C8  YC0 32 
YC0 C9  C33 C 0 1 N N N N N N -27.861 56.886 3.934 -2.687 -1.343 -0.514 C9  YC0 33 
YC0 N1  N1  N 0 1 N N N N N N -32.887 54.008 2.168 2.769  -0.770 0.844  N1  YC0 34 
YC0 N2  N2  N 0 1 N N N N N N -31.640 51.899 2.199 3.723  1.274  0.244  N2  YC0 35 
YC0 O1  O1  O 0 1 N N N N N N -25.091 52.348 7.493 -4.988 3.451  2.220  O1  YC0 36 
YC0 O2  O2  O 0 1 N N N N N N -22.780 52.785 5.746 -5.825 4.238  -0.239 O2  YC0 37 
YC0 O3  O3  O 0 1 N N N N N N -32.513 52.801 4.173 4.823  -0.642 0.009  O3  YC0 38 
YC0 O4  O4  O 0 1 N N N N N N -30.264 48.561 2.613 3.614  2.770  -2.230 O4  YC0 39 
YC0 O5  O5  O 0 1 N N N N N N -28.715 51.269 3.912 5.737  4.338  -0.124 O5  YC0 40 
YC0 O6  O6  O 0 1 N N N N N N -29.009 51.605 1.710 3.902  3.784  0.975  O6  YC0 41 
YC0 H1  H1  H 0 1 N N N N N N -30.393 56.791 5.900 -1.674 -2.539 2.292  H1  YC0 42 
YC0 H2  H2  H 0 1 N N N N N N -31.036 55.177 5.441 -0.323 -1.433 2.533  H2  YC0 43 
YC0 H3  H3  H 0 1 N N N N N N -28.878 55.004 6.658 -1.515 0.426  1.532  H3  YC0 44 
YC0 H4  H4  H 0 1 N N N N N N -28.757 54.369 4.981 -2.542 -0.326 2.742  H4  YC0 45 
YC0 H5  H5  H 0 1 N N N N N N -29.263 56.863 1.502 -1.975 -3.130 -2.453 H5  YC0 46 
YC0 H6  H6  H 0 1 N N N N N N -28.562 58.484 1.831 -0.661 -1.969 -2.245 H6  YC0 47 
YC0 H7  H7  H 0 1 N N N N N N -30.720 59.426 2.225 -0.705 -4.920 -1.438 H7  YC0 48 
YC0 H8  H8  H 0 1 N N N N N N -30.765 58.532 0.667 0.282  -4.164 -2.681 H8  YC0 49 
YC0 H9  H9  H 0 1 N N N N N N -31.903 57.699 4.326 -0.069 -4.004 1.141  H9  YC0 50 
YC0 H10 H10 H 0 1 N N N N N N -31.716 55.936 0.949 2.392  -3.450 -2.240 H10 YC0 51 
YC0 H11 H11 H 0 1 N N N N N N -32.576 57.311 0.176 1.722  -1.951 -1.605 H11 YC0 52 
YC0 H12 H12 H 0 1 N N N N N N -34.542 56.885 1.748 3.710  -3.822 -0.215 H12 YC0 53 
YC0 H13 H13 H 0 1 N N N N N N -34.214 55.521 0.626 4.017  -2.206 -0.841 H13 YC0 54 
YC0 H14 H14 H 0 1 N N N N N N -33.624 56.363 4.458 1.248  -2.172 2.363  H14 YC0 55 
YC0 H15 H15 H 0 1 N N N N N N -32.385 55.063 4.399 1.902  -3.772 2.085  H15 YC0 56 
YC0 H16 H16 H 0 1 N N N N N N -21.962 54.182 3.913 -5.856 3.611  -2.402 H16 YC0 57 
YC0 H17 H17 H 0 1 N N N N N N -23.070 54.766 2.625 -4.489 2.716  -3.108 H17 YC0 58 
YC0 H18 H18 H 0 1 N N N N N N -22.387 55.925 3.815 -6.049 1.899  -2.849 H18 YC0 59 
YC0 H19 H19 H 0 1 N N N N N N -27.531 56.582 7.462 -5.081 -1.718 0.668  H19 YC0 60 
YC0 H20 H20 H 0 1 N N N N N N -26.682 57.742 6.385 -3.839 -2.525 1.655  H20 YC0 61 
YC0 H21 H21 H 0 1 N N N N N N -28.468 57.820 6.558 -4.656 -1.068 2.269  H21 YC0 62 
YC0 H22 H22 H 0 1 N N N N N N -29.472 58.570 5.427 -2.692 -3.584 1.166  H22 YC0 63 
YC0 H23 H23 H 0 1 N N N N N N -28.798 59.521 4.061 -3.312 -3.948 -0.462 H23 YC0 64 
YC0 H24 H24 H 0 1 N N N N N N -30.549 59.123 4.100 -1.741 -4.601 0.058  H24 YC0 65 
YC0 H25 H25 H 0 1 N N N N N N -32.754 59.414 3.276 1.902  -5.623 -1.272 H25 YC0 66 
YC0 H26 H26 H 0 1 N N N N N N -33.263 59.287 1.558 2.338  -5.061 0.360  H26 YC0 67 
YC0 H27 H27 H 0 1 N N N N N N -33.993 58.206 2.793 0.740  -5.787 0.067  H27 YC0 68 
YC0 H28 H28 H 0 1 N N N N N N -28.979 54.785 3.167 -0.777 -0.162 -0.516 H28 YC0 69 
YC0 H29 H29 H 0 1 N N N N N N -30.719 54.341 3.120 0.551  -0.219 0.667  H29 YC0 70 
YC0 H30 H30 H 0 1 N N N N N N -30.039 55.439 1.872 0.723  -1.036 -0.904 H30 YC0 71 
YC0 H31 H31 H 0 1 N N N N N N -34.907 54.013 4.006 4.944  -2.061 1.561  H31 YC0 72 
YC0 H32 H32 H 0 1 N N N N N N -35.636 55.558 3.453 3.794  -2.080 2.920  H32 YC0 73 
YC0 H33 H33 H 0 1 N N N N N N -35.549 54.156 2.334 4.163  -3.586 2.045  H33 YC0 74 
YC0 H34 H34 H 0 1 N N N N N N -31.266 50.643 3.875 5.788  1.573  0.026  H34 YC0 75 
YC0 H35 H35 H 0 1 N N N N N N -30.852 49.687 0.996 5.668  2.549  -2.216 H35 YC0 76 
YC0 H36 H36 H 0 1 N N N N N N -32.163 49.168 2.109 4.734  1.034  -2.190 H36 YC0 77 
YC0 H37 H37 H 0 1 N N N N N N -26.852 51.664 4.721 4.669  6.116  0.102  H37 YC0 78 
YC0 H38 H38 H 0 1 N N N N N N -26.853 51.007 3.050 5.655  5.638  1.505  H38 YC0 79 
YC0 H39 H39 H 0 1 N N N N N N -27.343 52.709 3.346 6.440  6.295  0.049  H39 YC0 80 
YC0 H40 H40 H 0 1 N N N N N N -27.199 54.045 7.070 -3.833 1.192  2.501  H40 YC0 81 
YC0 H41 H41 H 0 1 N N N N N N -24.452 57.046 3.062 -4.264 0.376  -2.925 H41 YC0 82 
YC0 H43 H43 H 0 1 N N N N N N -26.729 57.651 2.162 -2.744 -1.478 -2.600 H43 YC0 83 
YC0 H44 H44 H 0 1 N N N N N N -32.697 53.970 1.187 1.959  -0.312 1.118  H44 YC0 84 
YC0 H45 H45 H 0 1 N N N N N N -31.616 51.990 1.203 2.914  1.732  0.519  H45 YC0 85 
YC0 H47 H47 H 0 1 N N N N N N -22.924 52.156 6.443 -5.966 4.760  0.562  H47 YC0 86 
YC0 H48 H48 H 0 1 N N N N N N -30.344 47.743 2.137 3.504  2.821  -3.190 H48 YC0 87 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YC0 C19 C20 SING N N 1  
YC0 C19 C17 SING N N 2  
YC0 C20 C21 SING N N 3  
YC0 O6  C32 DOUB N N 4  
YC0 C16 C15 SING N N 5  
YC0 C16 C17 SING N N 6  
YC0 C31 O4  SING N N 7  
YC0 C31 C30 SING N N 8  
YC0 C15 C11 SING N N 9  
YC0 N1  C21 SING N N 10 
YC0 N1  C29 SING N N 11 
YC0 N2  C30 SING N N 12 
YC0 N2  C29 SING N N 13 
YC0 C17 C26 SING N N 14 
YC0 C17 C18 SING N N 15 
YC0 C21 C28 SING N N 16 
YC0 C21 C22 SING N N 17 
YC0 C32 C30 SING N N 18 
YC0 C32 O5  SING N N 19 
YC0 C27 C12 SING N N 20 
YC0 C29 O3  DOUB N N 21 
YC0 C8  C7  SING N N 22 
YC0 C8  C9  DOUB N N 23 
YC0 C7  C2  DOUB N N 24 
YC0 C18 C12 SING N N 25 
YC0 C18 C22 SING N N 26 
YC0 C11 C12 SING N N 27 
YC0 C11 C9  SING N N 28 
YC0 C11 C25 SING N N 29 
YC0 C23 C1  SING N N 30 
YC0 C33 O5  SING N N 31 
YC0 C12 C13 SING N N 32 
YC0 C9  C10 SING N N 33 
YC0 C2  C1  SING N N 34 
YC0 C2  C3  SING N N 35 
YC0 C1  C6  DOUB N N 36 
YC0 C13 C14 SING N N 37 
YC0 C10 C3  SING N N 38 
YC0 C10 C14 SING N N 39 
YC0 C10 C24 SING N N 40 
YC0 C3  C4  DOUB N N 41 
YC0 C6  O2  SING N N 42 
YC0 C6  C5  SING N N 43 
YC0 C4  C5  SING N N 44 
YC0 C5  O1  DOUB N N 45 
YC0 C13 H1  SING N N 46 
YC0 C13 H2  SING N N 47 
YC0 C14 H3  SING N N 48 
YC0 C14 H4  SING N N 49 
YC0 C15 H5  SING N N 50 
YC0 C15 H6  SING N N 51 
YC0 C16 H7  SING N N 52 
YC0 C16 H8  SING N N 53 
YC0 C18 H9  SING N N 54 
YC0 C19 H10 SING N N 55 
YC0 C19 H11 SING N N 56 
YC0 C20 H12 SING N N 57 
YC0 C20 H13 SING N N 58 
YC0 C22 H14 SING N N 59 
YC0 C22 H15 SING N N 60 
YC0 C23 H16 SING N N 61 
YC0 C23 H17 SING N N 62 
YC0 C23 H18 SING N N 63 
YC0 C24 H19 SING N N 64 
YC0 C24 H20 SING N N 65 
YC0 C24 H21 SING N N 66 
YC0 C25 H22 SING N N 67 
YC0 C25 H23 SING N N 68 
YC0 C25 H24 SING N N 69 
YC0 C26 H25 SING N N 70 
YC0 C26 H26 SING N N 71 
YC0 C26 H27 SING N N 72 
YC0 C27 H28 SING N N 73 
YC0 C27 H29 SING N N 74 
YC0 C27 H30 SING N N 75 
YC0 C28 H31 SING N N 76 
YC0 C28 H32 SING N N 77 
YC0 C28 H33 SING N N 78 
YC0 C30 H34 SING N N 79 
YC0 C31 H35 SING N N 80 
YC0 C31 H36 SING N N 81 
YC0 C33 H37 SING N N 82 
YC0 C33 H38 SING N N 83 
YC0 C33 H39 SING N N 84 
YC0 C4  H40 SING N N 85 
YC0 C7  H41 SING N N 86 
YC0 C8  H43 SING N N 87 
YC0 N1  H44 SING N N 88 
YC0 N2  H45 SING N N 89 
YC0 O2  H47 SING N N 90 
YC0 O4  H48 SING N N 91 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YC0 InChI            InChI                1.06  "InChI=1S/C33H46N2O6/c1-19-20-8-9-24-31(4,21(20)16-23(37)26(19)38)13-15-33(6)25-17-30(3,12-10-29(25,2)11-14-32(24,33)5)35-28(40)34-22(18-36)27(39)41-7/h8-9,16,22,25,36,38H,10-15,17-18H2,1-7H3,(H2,34,35,40)/t22-,25+,29+,30+,31-,32+,33-/m0/s1" 
YC0 InChIKey         InChI                1.06  PJLZTFVARNCYGK-CPKSEDGTSA-N                                                                                                                                                                                                                       
YC0 SMILES_CANONICAL CACTVS               3.385 "COC(=O)[C@H](CO)NC(=O)N[C@]1(C)CC[C@]2(C)CC[C@]3(C)C4=CC=C5C(=C(O)C(=O)C=C5[C@]4(C)CC[C@@]3(C)[C@@H]2C1)C"                                                                                                                                       
YC0 SMILES           CACTVS               3.385 "COC(=O)[CH](CO)NC(=O)N[C]1(C)CC[C]2(C)CC[C]3(C)C4=CC=C5C(=C(O)C(=O)C=C5[C]4(C)CC[C]3(C)[CH]2C1)C"                                                                                                                                                
YC0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)C=C2C1=CC=C3[C@]2(CC[C@@]4([C@@]3(CC[C@@]5([C@H]4C[C@](CC5)(C)NC(=O)N[C@@H](CO)C(=O)OC)C)C)C)C)O"                                                                                                                                     
YC0 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)C=C2C1=CC=C3C2(CCC4(C3(CCC5(C4CC(CC5)(C)NC(=O)NC(CO)C(=O)OC)C)C)C)C)O"                                                                                                                                                                
# 
_pdbx_chem_comp_identifier.comp_id           YC0 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "methyl (2~{S})-2-[[(2~{R},4~{a}~{S},6~{a}~{R},6~{a}~{S},14~{a}~{S},14~{b}~{R})-2,4~{a},6~{a},6~{a},9,14~{a}-hexamethyl-10-oxidanyl-11-oxidanylidene-1,3,4,5,6,13,14,14~{b}-octahydropicen-2-yl]carbamoylamino]-3-oxidanyl-propanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YC0 "Create component" 2023-11-29 PDBJ 
YC0 "Initial release"  2024-06-19 RCSB 
# 
