data_JD1
# 
_chem_comp.id                                    JD1 
_chem_comp.name                                  "[({5-[4-(propan-2-yloxy)phenyl]pyridin-3-yl}amino)methanediyl]bis(phosphonic acid)" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H20 N2 O7 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-03-31 
_chem_comp.pdbx_modified_date                    2015-04-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        402.276 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JD1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4PVY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JD1 OAJ OAJ O 0 1 N N N 17.608 33.603 -9.026  -3.850 -0.715 2.203  OAJ JD1 1  
JD1 PAI PAI P 0 1 N N N 16.186 33.752 -9.614  -3.883 -1.233 0.679  PAI JD1 2  
JD1 OAK OAK O 0 1 N N N 16.131 35.029 -10.344 -2.841 -2.447 0.502  OAK JD1 3  
JD1 OAL OAL O 0 1 N N N 16.026 32.463 -10.392 -5.247 -1.701 0.347  OAL JD1 4  
JD1 CAH CAH C 0 1 N N N 14.966 33.795 -8.262  -3.420 0.133  -0.436 CAH JD1 5  
JD1 PAM PAM P 0 1 N N N 15.069 35.305 -7.182  -4.600 1.508  -0.236 PAM JD1 6  
JD1 OAN OAN O 0 1 N N N 16.447 35.273 -6.617  -6.084 0.999  -0.597 OAN JD1 7  
JD1 OAP OAP O 0 1 N N N 14.905 36.512 -8.030  -4.569 1.984  1.166  OAP JD1 8  
JD1 OAO OAO O 0 1 N N N 14.085 35.117 -6.099  -4.191 2.714  -1.221 OAO JD1 9  
JD1 NAG NAG N 0 1 N N N 15.175 32.629 -7.373  -2.070 0.595  -0.107 NAG JD1 10 
JD1 CAD CAD C 0 1 Y N N 14.887 31.377 -7.743  -0.960 -0.168 -0.479 CAD JD1 11 
JD1 CAE CAE C 0 1 Y N N 15.605 30.312 -7.202  0.326  0.263  -0.171 CAE JD1 12 
JD1 CAC CAC C 0 1 Y N N 13.926 31.086 -8.707  -1.127 -1.370 -1.156 CAC JD1 13 
JD1 NAB NAB N 0 1 Y N N 13.716 29.803 -9.090  -0.086 -2.098 -1.510 NAB JD1 14 
JD1 CAA CAA C 0 1 Y N N 14.438 28.770 -8.553  1.149  -1.724 -1.244 CAA JD1 15 
JD1 CAF CAF C 0 1 Y N N 15.400 28.982 -7.585  1.403  -0.535 -0.564 CAF JD1 16 
JD1 CAQ CAQ C 0 1 Y N N 16.158 27.905 -7.043  2.796  -0.120 -0.267 CAQ JD1 17 
JD1 CAV CAV C 0 1 Y N N 16.797 27.979 -5.779  3.864  -0.921 -0.668 CAV JD1 18 
JD1 CAU CAU C 0 1 Y N N 17.498 26.870 -5.257  5.157  -0.532 -0.391 CAU JD1 19 
JD1 CAR CAR C 0 1 Y N N 16.318 26.704 -7.736  3.039  1.074  0.409  CAR JD1 20 
JD1 CAS CAS C 0 1 Y N N 17.055 25.615 -7.243  4.335  1.458  0.683  CAS JD1 21 
JD1 CAT CAT C 0 1 Y N N 17.658 25.669 -5.998  5.397  0.655  0.287  CAT JD1 22 
JD1 OAW OAW O 0 1 N N N 18.308 24.541 -5.583  6.673  1.036  0.559  OAW JD1 23 
JD1 CAX CAX C 0 1 N N N 19.131 24.578 -4.421  7.720  0.226  0.020  CAX JD1 24 
JD1 CAZ CAZ C 0 1 N N N 19.608 23.171 -4.104  8.990  1.067  -0.128 CAZ JD1 25 
JD1 CAY CAY C 0 1 N N N 20.315 25.365 -4.783  7.992  -0.949 0.961  CAY JD1 26 
JD1 H1  H1  H 0 1 N N N 17.980 32.774 -9.303  -4.086 -1.391 2.853  H1  JD1 27 
JD1 H2  H2  H 0 1 N N N 15.993 34.860 -11.269 -1.925 -2.213 0.703  H2  JD1 28 
JD1 H3  H3  H 0 1 N N N 13.965 33.788 -8.717  -3.443 -0.218 -1.468 H3  JD1 29 
JD1 H4  H4  H 0 1 N N N 16.931 36.033 -6.919  -6.765 1.680  -0.512 H4  JD1 30 
JD1 H5  H5  H 0 1 N N N 13.462 35.834 -6.108  -4.190 2.473  -2.157 H5  JD1 31 
JD1 H6  H6  H 0 1 N N N 16.147 32.631 -7.138  -1.946 1.432  0.368  H6  JD1 32 
JD1 H7  H7  H 0 1 N N N 16.354 30.523 -6.453  0.488  1.191  0.358  H7  JD1 33 
JD1 H8  H8  H 0 1 N N N 13.347 31.883 -9.150  -2.122 -1.713 -1.394 H8  JD1 34 
JD1 H9  H9  H 0 1 N N N 14.250 27.763 -8.896  1.974  -2.350 -1.552 H9  JD1 35 
JD1 H10 H10 H 0 1 N N N 16.747 28.895 -5.209  3.678  -1.845 -1.195 H10 JD1 36 
JD1 H11 H11 H 0 1 N N N 17.924 26.937 -4.267  5.985  -1.152 -0.702 H11 JD1 37 
JD1 H12 H12 H 0 1 N N N 15.849 26.607 -8.704  2.214  1.699  0.717  H12 JD1 38 
JD1 H13 H13 H 0 1 N N N 17.153 24.723 -7.844  4.525  2.383  1.207  H13 JD1 39 
JD1 H14 H14 H 0 1 N N N 18.608 25.014 -3.557  7.419  -0.153 -0.957 H14 JD1 40 
JD1 H15 H15 H 0 1 N N N 20.245 23.192 -3.207  9.290  1.446  0.849  H15 JD1 41 
JD1 H16 H16 H 0 1 N N N 18.739 22.522 -3.921  9.788  0.449  -0.539 H16 JD1 42 
JD1 H17 H17 H 0 1 N N N 20.186 22.780 -4.954  8.796  1.904  -0.798 H17 JD1 43 
JD1 H18 H18 H 0 1 N N N 20.992 25.428 -3.918  7.087  -1.548 1.066  H18 JD1 44 
JD1 H19 H19 H 0 1 N N N 20.836 24.879 -5.621  8.790  -1.566 0.549  H19 JD1 45 
JD1 H20 H20 H 0 1 N N N 20.005 26.378 -5.081  8.292  -0.570 1.938  H20 JD1 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JD1 OAL PAI DOUB N N 1  
JD1 OAK PAI SING N N 2  
JD1 PAI OAJ SING N N 3  
JD1 PAI CAH SING N N 4  
JD1 NAB CAC DOUB Y N 5  
JD1 NAB CAA SING Y N 6  
JD1 CAC CAD SING Y N 7  
JD1 CAA CAF DOUB Y N 8  
JD1 CAH NAG SING N N 9  
JD1 CAH PAM SING N N 10 
JD1 OAP PAM DOUB N N 11 
JD1 CAD NAG SING N N 12 
JD1 CAD CAE DOUB Y N 13 
JD1 CAR CAS DOUB Y N 14 
JD1 CAR CAQ SING Y N 15 
JD1 CAF CAE SING Y N 16 
JD1 CAF CAQ SING N N 17 
JD1 CAS CAT SING Y N 18 
JD1 PAM OAN SING N N 19 
JD1 PAM OAO SING N N 20 
JD1 CAQ CAV DOUB Y N 21 
JD1 CAT OAW SING N N 22 
JD1 CAT CAU DOUB Y N 23 
JD1 CAV CAU SING Y N 24 
JD1 OAW CAX SING N N 25 
JD1 CAY CAX SING N N 26 
JD1 CAX CAZ SING N N 27 
JD1 OAJ H1  SING N N 28 
JD1 OAK H2  SING N N 29 
JD1 CAH H3  SING N N 30 
JD1 OAN H4  SING N N 31 
JD1 OAO H5  SING N N 32 
JD1 NAG H6  SING N N 33 
JD1 CAE H7  SING N N 34 
JD1 CAC H8  SING N N 35 
JD1 CAA H9  SING N N 36 
JD1 CAV H10 SING N N 37 
JD1 CAU H11 SING N N 38 
JD1 CAR H12 SING N N 39 
JD1 CAS H13 SING N N 40 
JD1 CAX H14 SING N N 41 
JD1 CAZ H15 SING N N 42 
JD1 CAZ H16 SING N N 43 
JD1 CAZ H17 SING N N 44 
JD1 CAY H18 SING N N 45 
JD1 CAY H19 SING N N 46 
JD1 CAY H20 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JD1 SMILES           ACDLabs              12.01 "O=P(O)(O)C(Nc1cc(cnc1)c2ccc(OC(C)C)cc2)P(=O)(O)O"                                                                                                
JD1 InChI            InChI                1.03  "InChI=1S/C15H20N2O7P2/c1-10(2)24-14-5-3-11(4-6-14)12-7-13(9-16-8-12)17-15(25(18,19)20)26(21,22)23/h3-10,15,17H,1-2H3,(H2,18,19,20)(H2,21,22,23)" 
JD1 InChIKey         InChI                1.03  AEYMCQCOKHXTEC-UHFFFAOYSA-N                                                                                                                       
JD1 SMILES_CANONICAL CACTVS               3.385 "CC(C)Oc1ccc(cc1)c2cncc(NC([P](O)(O)=O)[P](O)(O)=O)c2"                                                                                            
JD1 SMILES           CACTVS               3.385 "CC(C)Oc1ccc(cc1)c2cncc(NC([P](O)(O)=O)[P](O)(O)=O)c2"                                                                                            
JD1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)Oc1ccc(cc1)c2cc(cnc2)NC(P(=O)(O)O)P(=O)(O)O"                                                                                                
JD1 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)Oc1ccc(cc1)c2cc(cnc2)NC(P(=O)(O)O)P(=O)(O)O"                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JD1 "SYSTEMATIC NAME" ACDLabs              12.01 "[({5-[4-(propan-2-yloxy)phenyl]pyridin-3-yl}amino)methanediyl]bis(phosphonic acid)" 
JD1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[phosphono-[[5-(4-propan-2-yloxyphenyl)pyridin-3-yl]amino]methyl]phosphonic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JD1 "Create component" 2014-03-31 RCSB 
JD1 "Initial release"  2015-04-15 RCSB 
# 
