data_OP1
#

_chem_comp.id                                   OP1
_chem_comp.name                                 "1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H18 N4 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Pyronopaline
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-02-28
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       286.284
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OP1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4POW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OP1  CA   CA   C  0  1  N  N  S  3.627  18.204   2.913  -0.798  -0.982  -0.574  CA   OP1   1  
OP1  C    C    C  0  1  N  N  N  2.303  17.544   3.289  -1.708  -2.159  -0.332  C    OP1   2  
OP1  O    O    O  0  1  N  N  N  2.319  16.514   4.012  -1.475  -3.326  -0.953  O    OP1   3  
OP1  CB   CB   C  0  1  N  N  N  4.263  18.801   4.156   0.628  -1.345  -0.156  CB   OP1   4  
OP1  CG   CG   C  0  1  N  N  N  3.364  19.638   4.986   1.573  -0.197  -0.517  CG   OP1   5  
OP1  CD   CD   C  0  1  N  N  N  4.044  20.105   6.212   2.999  -0.560  -0.099  CD   OP1   6  
OP1  NE   NE   N  0  1  N  N  N  3.278  21.254   6.729   3.904   0.539  -0.444  NE   OP1   7  
OP1  CZ   CZ   C  0  1  N  N  N  3.679  21.885   7.952   5.246   0.440  -0.162  CZ   OP1   8  
OP1  NH2  NH2  N  0  1  N  N  N  2.935  22.947   8.286   5.713  -0.633   0.412  NH2  OP1   9  
OP1  NH1  NH1  N  0  1  N  N  N  4.685  21.441   8.675   6.095   1.471  -0.486  NH1  OP1  10  
OP1  N    N    N  0  1  N  N  N  3.444  19.165   1.820  -1.261   0.163   0.214  N    OP1  11  
OP1  CAU  CAU  C  0  1  N  N  R  3.830  20.553   1.626  -1.675   1.450  -0.359  CAU  OP1  12  
OP1  CAM  CAM  C  0  1  N  N  N  3.170  20.991   0.366  -1.652   2.451   0.818  CAM  OP1  13  
OP1  CAK  CAK  C  0  1  N  N  N  2.971  19.756  -0.465  -1.862   1.516   2.031  CAK  OP1  14  
OP1  CAQ  CAQ  C  0  1  N  N  N  2.898  18.694   0.576  -1.367   0.169   1.554  CAQ  OP1  15  
OP1  OAM  OAM  O  0  1  N  N  N  2.884  17.369   0.263  -1.098  -0.768   2.276  OAM  OP1  16  
OP1  CAS  CAS  C  0  1  N  N  N  5.291  20.645   1.457  -3.066   1.344  -0.929  CAS  OP1  17  
OP1  OAH  OAH  O  0  1  N  N  N  5.999  19.606   1.241  -3.665   0.297  -0.868  OAH  OP1  18  
OP1  OAE  OAE  O  0  1  N  N  N  5.864  21.757   1.491  -3.639   2.413  -1.504  OAE  OP1  19  
OP1  OXT  OXT  O  0  1  N  N  N  1.210  18.094   2.922  -2.646  -2.052   0.422  OXT  OP1  20  
OP1  H1   H1   H  0  1  N  N  N  4.296  17.408   2.554  -0.812  -0.724  -1.633  H1   OP1  21  
OP1  H2   H2   H  0  1  N  N  N  1.428  16.253   4.211  -2.086  -4.052  -0.766  H2   OP1  22  
OP1  H3   H3   H  0  1  N  N  N  4.631  17.974   4.781   0.659  -1.516   0.920  H3   OP1  23  
OP1  H4   H4   H  0  1  N  N  N  5.111  19.425   3.838   0.940  -2.250  -0.678  H4   OP1  24  
OP1  H5   H5   H  0  1  N  N  N  3.045  20.512   4.399   1.542  -0.025  -1.592  H5   OP1  25  
OP1  H6   H6   H  0  1  N  N  N  2.482  19.044   5.269   1.261   0.708   0.005  H6   OP1  26  
OP1  H7   H7   H  0  1  N  N  N  4.065  19.299   6.961   3.030  -0.732   0.977  H7   OP1  27  
OP1  H8   H8   H  0  1  N  N  N  5.073  20.414   5.977   3.311  -1.465  -0.620  H8   OP1  28  
OP1  H9   H9   H  0  1  N  N  N  2.481  21.592   6.228   3.556   1.338  -0.872  H9   OP1  29  
OP1  H10  H10  H  0  1  N  N  N  3.235  23.359   9.146   6.660  -0.703   0.611  H10  OP1  30  
OP1  H12  H12  H  0  1  N  N  N  4.931  21.903   9.527   5.747   2.270  -0.914  H12  OP1  31  
OP1  H13  H13  H  0  1  N  N  N  5.204  20.641   8.372   7.042   1.401  -0.287  H13  OP1  32  
OP1  H14  H14  H  0  1  N  N  N  3.497  21.175   2.470  -0.973   1.761  -1.133  H14  OP1  33  
OP1  H15  H15  H  0  1  N  N  N  3.810  21.709  -0.168  -0.690   2.959   0.879  H15  OP1  34  
OP1  H16  H16  H  0  1  N  N  N  2.200  21.459   0.588  -2.466   3.171   0.733  H16  OP1  35  
OP1  H17  H17  H  0  1  N  N  N  2.039  19.811  -1.047  -1.277   1.861   2.884  H17  OP1  36  
OP1  H18  H18  H  0  1  N  N  N  3.819  19.591  -1.146  -2.920   1.460   2.291  H18  OP1  37  
OP1  H19  H19  H  0  1  N  N  N  6.795  21.639   1.341  -4.532   2.296  -1.855  H19  OP1  38  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OP1  CAK  CAM  SING  N  N   1  
OP1  CAK  CAQ  SING  N  N   2  
OP1  OAM  CAQ  DOUB  N  N   3  
OP1  CAM  CAU  SING  N  N   4  
OP1  CAQ  N    SING  N  N   5  
OP1  OAH  CAS  DOUB  N  N   6  
OP1  CAS  OAE  SING  N  N   7  
OP1  CAS  CAU  SING  N  N   8  
OP1  CAU  N    SING  N  N   9  
OP1  N    CA   SING  N  N  10  
OP1  CA   C    SING  N  N  11  
OP1  CA   CB   SING  N  N  12  
OP1  OXT  C    DOUB  N  N  13  
OP1  C    O    SING  N  N  14  
OP1  CB   CG   SING  N  N  15  
OP1  CG   CD   SING  N  N  16  
OP1  CD   NE   SING  N  N  17  
OP1  NE   CZ   SING  N  N  18  
OP1  CZ   NH2  DOUB  N  N  19  
OP1  CZ   NH1  SING  N  N  20  
OP1  CA   H1   SING  N  N  21  
OP1  O    H2   SING  N  N  22  
OP1  CB   H3   SING  N  N  23  
OP1  CB   H4   SING  N  N  24  
OP1  CG   H5   SING  N  N  25  
OP1  CG   H6   SING  N  N  26  
OP1  CD   H7   SING  N  N  27  
OP1  CD   H8   SING  N  N  28  
OP1  NE   H9   SING  N  N  29  
OP1  NH2  H10  SING  N  N  30  
OP1  NH1  H12  SING  N  N  31  
OP1  NH1  H13  SING  N  N  32  
OP1  CAU  H14  SING  N  N  33  
OP1  CAM  H15  SING  N  N  34  
OP1  CAM  H16  SING  N  N  35  
OP1  CAK  H17  SING  N  N  36  
OP1  CAK  H18  SING  N  N  37  
OP1  OAE  H19  SING  N  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OP1  SMILES            ACDLabs               12.01  "O=C(O)C(N1C(=O)CCC1C(=O)O)CCCNC(=[N@H])N"  
OP1  InChI             InChI                 1.03   "InChI=1S/C11H18N4O5/c12-11(13)14-5-1-2-6(9(17)18)15-7(10(19)20)3-4-8(15)16/h6-7H,1-5H2,(H,17,18)(H,19,20)(H4,12,13,14)/t6-,7+/m0/s1"  
OP1  InChIKey          InChI                 1.03   GTRMYGUJZGMZEF-NKWVEPMBSA-N  
OP1  SMILES_CANONICAL  CACTVS                3.385  "NC(=N)NCCC[C@H](N1[C@H](CCC1=O)C(O)=O)C(O)=O"  
OP1  SMILES            CACTVS                3.385  "NC(=N)NCCC[CH](N1[CH](CCC1=O)C(O)=O)C(O)=O"  
OP1  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "[H]/N=C(\N)/NCCC[C@@H](C(=O)O)N1[C@H](CCC1=O)C(=O)O"  
OP1  SMILES            "OpenEye OEToolkits"  1.7.6  "C1CC(=O)N(C1C(=O)O)C(CCCNC(=N)N)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OP1  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-[(1S)-4-carbamimidamido-1-carboxybutyl]-5-oxo-D-proline"  
OP1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R)-1-[(2S)-5-carbamimidamido-1-oxidanyl-1-oxidanylidene-pentan-2-yl]-5-oxidanylidene-pyrrolidine-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OP1  "Create component"  2014-02-28  RCSB  
OP1  "Modify synonyms"   2014-03-04  RCSB  
OP1  "Initial release"   2014-10-22  RCSB  
OP1  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     OP1
_pdbx_chem_comp_synonyms.name        Pyronopaline
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
