data_Y82
# 
_chem_comp.id                                    Y82 
_chem_comp.name                                  "5-[(1R,3S,4R)-1-azabicyclo[2.2.2]octan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H20 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-11 
_chem_comp.pdbx_modified_date                    2023-12-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        296.367 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y82 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FRX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y82 C8  C1  C 0 1 Y N N N N N 110.191 130.063 103.186 -2.360 -0.279 0.052  C8  Y82 1  
Y82 C5  C2  C 0 1 Y N N N N N 109.458 132.347 103.725 -4.614 0.591  -0.070 C5  Y82 2  
Y82 C6  C3  C 0 1 Y N N N N N 109.175 131.033 103.351 -3.748 -0.488 0.092  C6  Y82 3  
Y82 N1  N1  N 0 1 Y N N N N N 107.998 130.374 103.066 -3.938 -1.834 0.276  N1  Y82 4  
Y82 C2  C4  C 0 1 Y N N N N N 111.546 130.382 103.400 -1.848 1.033  -0.056 C2  Y82 5  
Y82 N3  N2  N 0 1 N N N N N N 112.596 128.080 103.329 0.590  0.510  -0.238 N3  Y82 6  
Y82 C4  C5  C 0 1 Y N N N N N 110.800 132.655 103.932 -4.106 1.858  -0.262 C4  Y82 7  
Y82 N2  N3  N 0 1 Y N N N N N 108.209 129.088 102.743 -2.684 -2.456 0.240  N2  Y82 8  
Y82 N4  N4  N 0 1 N N N N N N 115.073 125.845 101.458 3.925  -0.082 -0.985 N4  Y82 9  
Y82 C7  C6  C 0 1 Y N N N N N 109.500 128.886 102.806 -1.751 -1.562 0.088  C7  Y82 10 
Y82 C1  C7  C 0 1 N N N N N N 112.750 129.451 103.257 -0.423 1.324  0.109  C1  Y82 11 
Y82 C10 C8  C 0 1 N N N N N N 111.307 127.394 103.565 0.384  -0.749 -0.911 C10 Y82 12 
Y82 C11 C9  C 0 1 N N S N N N 113.830 127.247 103.176 1.961  0.920  0.080  C11 Y82 13 
Y82 C12 C10 C 0 1 N N N N N N 114.392 127.209 101.721 2.820  0.865  -1.186 C12 Y82 14 
Y82 C13 C11 C 0 1 N N N N N N 116.093 125.535 102.573 4.799  0.353  0.113  C13 Y82 15 
Y82 C14 C12 C 0 1 N N N N N N 115.331 125.400 103.910 3.997  0.393  1.416  C14 Y82 16 
Y82 C15 C13 C 0 1 N N N N N N 113.830 125.800 103.787 2.554  -0.037 1.123  C15 Y82 17 
Y82 C16 C14 C 0 1 N N N N N N 113.268 124.740 102.788 2.576  -1.452 0.531  C16 Y82 18 
Y82 C17 C15 C 0 1 N N N N N N 114.014 124.726 101.432 3.418  -1.441 -0.747 C17 Y82 19 
Y82 C3  C16 C 0 1 Y N N N N N 111.810 131.712 103.774 -2.740 2.085  -0.256 C3  Y82 20 
Y82 C9  C17 C 0 1 N N N N N N 110.192 127.587 102.527 -0.285 -1.792 -0.051 C9  Y82 21 
Y82 O1  O1  O 0 1 N N N N N N 113.847 129.987 103.065 -0.129 2.396  0.604  O1  Y82 22 
Y82 H1  H1  H 0 1 N N N N N N 108.679 133.085 103.847 -5.682 0.436  -0.043 H1  Y82 23 
Y82 H2  H2  H 0 1 N N N N N N 107.095 130.803 103.096 -4.791 -2.277 0.409  H2  Y82 24 
Y82 H3  H3  H 0 1 N N N N N N 111.066 133.660 104.225 -4.782 2.684  -0.420 H3  Y82 25 
Y82 H5  H5  H 0 1 N N N N N N 110.920 127.747 104.532 -0.233 -0.576 -1.793 H5  Y82 26 
Y82 H6  H6  H 0 1 N N N N N N 111.516 126.316 103.626 1.352  -1.134 -1.233 H6  Y82 27 
Y82 H7  H7  H 0 1 N N N N N N 114.602 127.780 103.750 1.955  1.935  0.477  H7  Y82 28 
Y82 H8  H8  H 0 1 N N N N N N 115.129 128.016 101.593 3.224  1.856  -1.394 H8  Y82 29 
Y82 H9  H9  H 0 1 N N N N N N 113.567 127.349 101.007 2.208  0.537  -2.027 H9  Y82 30 
Y82 H10 H10 H 0 1 N N N N N N 116.615 124.594 102.347 5.627  -0.349 0.218  H10 Y82 31 
Y82 H11 H11 H 0 1 N N N N N N 116.825 126.353 102.644 5.190  1.347  -0.105 H11 Y82 32 
Y82 H12 H12 H 0 1 N N N N N N 115.391 124.354 104.245 4.441  -0.289 2.140  H12 Y82 33 
Y82 H13 H13 H 0 1 N N N N N N 115.809 126.052 104.656 4.003  1.407  1.818  H13 Y82 34 
Y82 H14 H14 H 0 1 N N N N N N 113.313 125.766 104.757 1.961  -0.009 2.037  H14 Y82 35 
Y82 H15 H15 H 0 1 N N N N N N 112.207 124.963 102.601 3.014  -2.142 1.252  H15 Y82 36 
Y82 H16 H16 H 0 1 N N N N N N 113.358 123.744 103.247 1.558  -1.766 0.298  H16 Y82 37 
Y82 H17 H17 H 0 1 N N N N N N 113.302 124.905 100.613 2.803  -1.753 -1.591 H17 Y82 38 
Y82 H18 H18 H 0 1 N N N N N N 114.504 123.752 101.286 4.258  -2.127 -0.635 H18 Y82 39 
Y82 H19 H19 H 0 1 N N N N N N 112.833 132.012 103.945 -2.363 3.086  -0.406 H19 Y82 40 
Y82 H20 H20 H 0 1 N N N N N N 109.471 126.760 102.600 0.169  -1.777 0.939  H20 Y82 41 
Y82 H21 H21 H 0 1 N N N N N N 110.626 127.608 101.516 -0.124 -2.773 -0.497 H21 Y82 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y82 C17 N4  SING N N 1  
Y82 C17 C16 SING N N 2  
Y82 N4  C12 SING N N 3  
Y82 N4  C13 SING N N 4  
Y82 C12 C11 SING N N 5  
Y82 C9  C7  SING N N 6  
Y82 C9  C10 SING N N 7  
Y82 C13 C14 SING N N 8  
Y82 N2  C7  DOUB Y N 9  
Y82 N2  N1  SING Y N 10 
Y82 C16 C15 SING N N 11 
Y82 C7  C8  SING Y N 12 
Y82 O1  C1  DOUB N N 13 
Y82 N1  C6  SING Y N 14 
Y82 C11 N3  SING N N 15 
Y82 C11 C15 SING N N 16 
Y82 C8  C6  DOUB Y N 17 
Y82 C8  C2  SING Y N 18 
Y82 C1  N3  SING N N 19 
Y82 C1  C2  SING N N 20 
Y82 N3  C10 SING N N 21 
Y82 C6  C5  SING Y N 22 
Y82 C2  C3  DOUB Y N 23 
Y82 C5  C4  DOUB Y N 24 
Y82 C3  C4  SING Y N 25 
Y82 C15 C14 SING N N 26 
Y82 C5  H1  SING N N 27 
Y82 N1  H2  SING N N 28 
Y82 C4  H3  SING N N 29 
Y82 C10 H5  SING N N 30 
Y82 C10 H6  SING N N 31 
Y82 C11 H7  SING N N 32 
Y82 C12 H8  SING N N 33 
Y82 C12 H9  SING N N 34 
Y82 C13 H10 SING N N 35 
Y82 C13 H11 SING N N 36 
Y82 C14 H12 SING N N 37 
Y82 C14 H13 SING N N 38 
Y82 C15 H14 SING N N 39 
Y82 C16 H15 SING N N 40 
Y82 C16 H16 SING N N 41 
Y82 C17 H17 SING N N 42 
Y82 C17 H18 SING N N 43 
Y82 C3  H19 SING N N 44 
Y82 C9  H20 SING N N 45 
Y82 C9  H21 SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y82 SMILES           ACDLabs              12.01 "O=C1c2cccc3[NH]nc(CCN1C1CN4CCC1CC4)c23"                                                                                              
Y82 InChI            InChI                1.06  "InChI=1S/C17H20N4O/c22-17-12-2-1-3-13-16(12)14(19-18-13)6-9-21(17)15-10-20-7-4-11(15)5-8-20/h1-3,11,15H,4-10H2,(H,18,19)/t15-/m1/s1" 
Y82 InChIKey         InChI                1.06  WHLXDRXTKZLGFK-OAHLLOKOSA-N                                                                                                           
Y82 SMILES_CANONICAL CACTVS               3.385 "O=C1N(CCc2n[nH]c3cccc1c23)[C@@H]4CN5CCC4CC5"                                                                                         
Y82 SMILES           CACTVS               3.385 "O=C1N(CCc2n[nH]c3cccc1c23)[CH]4CN5CCC4CC5"                                                                                           
Y82 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c3c(c1)[nH]nc3CCN(C2=O)[C@@H]4CN5CCC4CC5"                                                                                       
Y82 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c3c(c1)[nH]nc3CCN(C2=O)C4CN5CCC4CC5"                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y82 "SYSTEMATIC NAME" ACDLabs              12.01 "5-[(1R,3S,4R)-1-azabicyclo[2.2.2]octan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one"                 
Y82 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "10-[(3~{S})-1-azabicyclo[2.2.2]octan-3-yl]-2,3,10-triazatricyclo[6.4.1.0^{4,13}]trideca-1,4(13),5,7-tetraen-9-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y82 "Create component" 2023-01-11 RCSB 
Y82 "Initial release"  2023-12-27 RCSB 
# 
