data_633
# 
_chem_comp.id                                    633 
_chem_comp.name                                  "N-{3-[(2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)oxy]phenyl}propanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H29 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         
;Bound form of
N-{3-[(2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)oxy]phenyl}prop-2-enamide
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-01-18 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        471.554 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     633 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5HG5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
633 C4  C1  C 0 1 Y N N N N N 9.994  -3.927 -33.549 -1.289  -3.200 -0.119 C4  633 1  
633 C5  C2  C 0 1 Y N N N N N 9.693  -2.567 -33.721 0.117   -3.145 -0.112 C5  633 2  
633 C8  C3  C 0 1 Y N N N N N 7.781  -3.708 -33.805 -0.489  -5.271 -0.504 C8  633 3  
633 C13 C4  C 0 1 Y N N N N N 15.469 -5.914 -33.248 -4.045  1.228  1.586  C13 633 4  
633 C15 C5  C 0 1 Y N N N N N 14.632 -6.136 -30.923 -5.928  0.559  0.256  C15 633 5  
633 C20 C6  C 0 1 N N N N N N 16.368 -6.251 -26.271 -9.144  3.870  -1.234 C20 633 6  
633 C24 C7  C 0 1 Y N N N N N 15.014 -2.066 -33.095 2.664   -0.256 -0.669 C24 633 7  
633 C26 C8  C 0 1 Y N N N N N 17.142 -0.771 -32.970 4.788   0.544  0.106  C26 633 8  
633 C28 C9  C 0 1 Y N N N N N 14.951 0.338  -33.455 2.789   1.115  1.303  C28 633 9  
633 C1  C10 C 0 1 Y N N N N N 11.875 -1.898 -33.557 -0.011  -0.882 0.307  C1  633 10 
633 N2  N1  N 0 1 Y N N N N N 12.260 -3.194 -33.377 -1.338  -0.894 0.306  N2  633 11 
633 C3  C11 C 0 1 Y N N N N N 11.352 -4.223 -33.372 -2.012  -2.019 0.101  C3  633 12 
633 N6  N2  N 0 1 Y N N N N N 10.570 -1.522 -33.738 0.709   -1.972 0.103  N6  633 13 
633 N7  N3  N 0 1 Y N N N N N 8.344  -2.458 -33.873 0.571   -4.414 -0.348 N7  633 14 
633 C9  C12 C 0 1 Y N N N N N 8.779  -4.639 -33.606 -1.643  -4.595 -0.381 C9  633 15 
633 O10 O1  O 0 1 N N N N N N 11.766 -5.544 -33.193 -3.366  -2.026 0.102  O10 633 16 
633 C11 C13 C 0 1 Y N N N N N 13.069 -5.734 -32.780 -4.010  -0.874 0.429  C11 633 17 
633 C12 C14 C 0 1 Y N N N N N 14.145 -5.719 -33.712 -3.395  0.054  1.258  C12 633 18 
633 C14 C15 C 0 1 Y N N N N N 15.717 -6.121 -31.860 -5.310  1.482  1.090  C14 633 19 
633 C16 C16 C 0 1 Y N N N N N 13.310 -5.942 -31.398 -5.274  -0.618 -0.079 C16 633 20 
633 N17 N4  N 0 1 N N N N N N 14.759 -6.331 -29.516 -7.209  0.816  -0.245 N17 633 21 
633 C18 C17 C 0 1 N N N N N N 15.903 -6.523 -28.763 -7.577  2.079  -0.538 C18 633 22 
633 C19 C18 C 0 1 N N N N N N 15.569 -6.966 -27.349 -8.993  2.372  -0.963 C19 633 23 
633 O21 O2  O 0 1 N N N N N N 17.068 -6.360 -29.127 -6.768  2.980  -0.460 O21 633 24 
633 N22 N5  N 0 1 N N N N N N 12.845 -0.877 -33.559 0.645   0.319  0.526  N22 633 25 
633 C23 C19 C 0 1 Y N N N N N 14.248 -0.894 -33.374 2.037   0.393  0.386  C23 633 26 
633 C25 C20 C 0 1 Y N N N N N 16.421 -2.012 -32.896 4.036   -0.183 -0.808 C25 633 27 
633 C27 C21 C 0 1 Y N N N N N 16.357 0.403  -33.262 4.160   1.197  1.158  C27 633 28 
633 N29 N6  N 0 1 N N N N N N 18.559 -0.644 -32.768 6.178   0.617  -0.034 N29 633 29 
633 C30 C22 C 0 1 N N N N N N 19.374 -1.898 -32.763 6.773   1.433  1.035  C30 633 30 
633 C31 C23 C 0 1 N N N N N N 20.867 -1.569 -32.653 8.297   1.423  0.892  C31 633 31 
633 N32 N7  N 0 1 N N N N N N 21.111 -0.735 -31.407 8.666   1.944  -0.431 N32 633 32 
633 C33 C24 C 0 1 N N N N N N 20.287 0.535  -31.398 8.071   1.129  -1.500 C33 633 33 
633 C34 C25 C 0 1 N N N N N N 18.807 0.172  -31.523 6.548   1.139  -1.357 C34 633 34 
633 C35 C26 C 0 1 N N N N N N 22.571 -0.400 -31.278 10.125  2.021  -0.578 C35 633 35 
633 H1  H1  H 0 1 N N N N N N 6.727  -3.927 -33.893 -0.408  -6.330 -0.702 H1  633 36 
633 H2  H2  H 0 1 N N N N N N 16.292 -5.906 -33.947 -3.566  1.946  2.235  H2  633 37 
633 H3  H3  H 0 1 N N N N N N 16.068 -6.627 -25.282 -8.914  4.429  -0.327 H3  633 38 
633 H4  H4  H 0 1 N N N N N N 17.441 -6.439 -26.425 -8.458  4.167  -2.027 H4  633 39 
633 H5  H5  H 0 1 N N N N N N 16.173 -5.170 -26.327 -10.168 4.082  -1.541 H5  633 40 
633 H6  H6  H 0 1 N N N N N N 14.511 -3.020 -33.033 2.079   -0.821 -1.380 H6  633 41 
633 H7  H7  H 0 1 N N N N N N 14.405 1.245  -33.668 2.302   1.619  2.124  H7  633 42 
633 H8  H8  H 0 1 N N N N N N 7.843  -1.604 -34.012 1.505   -4.671 -0.395 H8  633 43 
633 H9  H9  H 0 1 N N N N N N 8.654  -5.708 -33.512 -2.639  -5.004 -0.456 H9  633 44 
633 H10 H10 H 0 1 N N N N N N 13.954 -5.560 -34.763 -2.407  -0.142 1.647  H10 633 45 
633 H11 H11 H 0 1 N N N N N N 16.729 -6.268 -31.512 -5.818  2.398  1.352  H11 633 46 
633 H12 H12 H 0 1 N N N N N N 12.483 -5.953 -30.704 -5.749  -1.334 -0.734 H12 633 47 
633 H13 H13 H 0 1 N N N N N N 13.901 -6.329 -29.002 -7.832  0.085  -0.382 H13 633 48 
633 H14 H14 H 0 1 N N N N N N 14.500 -6.776 -27.171 -9.679  2.075  -0.169 H14 633 49 
633 H15 H15 H 0 1 N N N N N N 15.768 -8.045 -27.269 -9.223  1.814  -1.870 H15 633 50 
633 H16 H16 H 0 1 N N N N N N 12.470 0.036  -33.723 0.140   1.108  0.777  H16 633 51 
633 H17 H17 H 0 1 N N N N N N 16.960 -2.924 -32.685 4.524   -0.692 -1.626 H17 633 52 
633 H18 H18 H 0 1 N N N N N N 16.853 1.360  -33.336 4.746   1.759  1.871  H18 633 53 
633 H19 H19 H 0 1 N N N N N N 19.076 -2.519 -31.906 6.407   2.456  0.957  H19 633 54 
633 H20 H20 H 0 1 N N N N N N 19.193 -2.451 -33.697 6.495   1.019  2.004  H20 633 55 
633 H21 H21 H 0 1 N N N N N N 21.445 -2.503 -32.588 8.738   2.050  1.667  H21 633 56 
633 H22 H22 H 0 1 N N N N N N 21.184 -1.003 -33.541 8.665   0.402  0.997  H22 633 57 
633 H24 H24 H 0 1 N N N N N N 20.583 1.172  -32.245 8.349   1.542  -2.469 H24 633 58 
633 H25 H25 H 0 1 N N N N N N 20.455 1.076  -30.455 8.438   0.105  -1.422 H25 633 59 
633 H26 H26 H 0 1 N N N N N N 18.212 1.096  -31.573 6.106   0.511  -2.132 H26 633 60 
633 H27 H27 H 0 1 N N N N N N 18.503 -0.413 -30.642 6.179   2.159  -1.462 H27 633 61 
633 H28 H28 H 0 1 N N N N N N 22.731 0.203  -30.372 10.556  1.026  -0.462 H28 633 62 
633 H29 H29 H 0 1 N N N N N N 23.155 -1.329 -31.207 10.371  2.410  -1.566 H29 633 63 
633 H30 H30 H 0 1 N N N N N N 22.895 0.171  -32.160 10.533  2.685  0.185  H30 633 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
633 N7  C8  SING Y N 1  
633 N7  C5  SING Y N 2  
633 C8  C9  DOUB Y N 3  
633 N6  C5  DOUB Y N 4  
633 N6  C1  SING Y N 5  
633 C5  C4  SING Y N 6  
633 C12 C13 DOUB Y N 7  
633 C12 C11 SING Y N 8  
633 C9  C4  SING Y N 9  
633 N22 C1  SING N N 10 
633 N22 C23 SING N N 11 
633 C1  N2  DOUB Y N 12 
633 C4  C3  DOUB Y N 13 
633 C28 C23 DOUB Y N 14 
633 C28 C27 SING Y N 15 
633 N2  C3  SING Y N 16 
633 C23 C24 SING Y N 17 
633 C3  O10 SING N N 18 
633 C27 C26 DOUB Y N 19 
633 C13 C14 SING Y N 20 
633 O10 C11 SING N N 21 
633 C24 C25 DOUB Y N 22 
633 C26 C25 SING Y N 23 
633 C26 N29 SING N N 24 
633 C11 C16 DOUB Y N 25 
633 N29 C30 SING N N 26 
633 N29 C34 SING N N 27 
633 C30 C31 SING N N 28 
633 C31 N32 SING N N 29 
633 C14 C15 DOUB Y N 30 
633 C34 C33 SING N N 31 
633 N32 C33 SING N N 32 
633 N32 C35 SING N N 33 
633 C16 C15 SING Y N 34 
633 C15 N17 SING N N 35 
633 N17 C18 SING N N 36 
633 O21 C18 DOUB N N 37 
633 C18 C19 SING N N 38 
633 C19 C20 SING N N 39 
633 C8  H1  SING N N 40 
633 C13 H2  SING N N 41 
633 C20 H3  SING N N 42 
633 C20 H4  SING N N 43 
633 C20 H5  SING N N 44 
633 C24 H6  SING N N 45 
633 C28 H7  SING N N 46 
633 N7  H8  SING N N 47 
633 C9  H9  SING N N 48 
633 C12 H10 SING N N 49 
633 C14 H11 SING N N 50 
633 C16 H12 SING N N 51 
633 N17 H13 SING N N 52 
633 C19 H14 SING N N 53 
633 C19 H15 SING N N 54 
633 N22 H16 SING N N 55 
633 C25 H17 SING N N 56 
633 C27 H18 SING N N 57 
633 C30 H19 SING N N 58 
633 C30 H20 SING N N 59 
633 C31 H21 SING N N 60 
633 C31 H22 SING N N 61 
633 C33 H24 SING N N 62 
633 C33 H25 SING N N 63 
633 C34 H26 SING N N 64 
633 C34 H27 SING N N 65 
633 C35 H28 SING N N 66 
633 C35 H29 SING N N 67 
633 C35 H30 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
633 SMILES           ACDLabs              12.01 "c12c(nc(nc1ncc2)Nc4ccc(N3CCN(CC3)C)cc4)Oc5cc(NC(CC)=O)ccc5"                                                                                                                              
633 InChI            InChI                1.03  "InChI=1S/C26H29N7O2/c1-3-23(34)28-19-5-4-6-21(17-19)35-25-22-11-12-27-24(22)30-26(31-25)29-18-7-9-20(10-8-18)33-15-13-32(2)14-16-33/h4-12,17H,3,13-16H2,1-2H3,(H,28,34)(H2,27,29,30,31)" 
633 InChIKey         InChI                1.03  JZXKYJJXGSXWTQ-UHFFFAOYSA-N                                                                                                                                                               
633 SMILES_CANONICAL CACTVS               3.385 "CCC(=O)Nc1cccc(Oc2nc(Nc3ccc(cc3)N4CCN(C)CC4)nc5[nH]ccc25)c1"                                                                                                                             
633 SMILES           CACTVS               3.385 "CCC(=O)Nc1cccc(Oc2nc(Nc3ccc(cc3)N4CCN(C)CC4)nc5[nH]ccc25)c1"                                                                                                                             
633 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CCC(=O)Nc1cccc(c1)Oc2c3cc[nH]c3nc(n2)Nc4ccc(cc4)N5CCN(CC5)C"                                                                                                                             
633 SMILES           "OpenEye OEToolkits" 2.0.4 "CCC(=O)Nc1cccc(c1)Oc2c3cc[nH]c3nc(n2)Nc4ccc(cc4)N5CCN(CC5)C"                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
633 "SYSTEMATIC NAME" ACDLabs              12.01 "N-{3-[(2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)oxy]phenyl}propanamide"       
633 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[3-[[2-[[4-(4-methylpiperazin-1-yl)phenyl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]oxy]phenyl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
633 "Create component" 2016-01-18 RCSB 
633 "Initial release"  2016-02-03 RCSB 
633 "Modify synonyms"  2020-06-05 PDBE 
633 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      633 
_pdbx_chem_comp_synonyms.name         "Bound form of N-{3-[(2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)oxy]phenyl}prop-2-enamide" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            633 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C20 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
