data_IE3
# 
_chem_comp.id                                    IE3 
_chem_comp.name                                  "[3-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-4-methoxy-phenyl]-(3,4,5-trimethoxyphenyl)methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H28 O10 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-03-11 
_chem_comp.pdbx_modified_date                    2023-01-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        496.527 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     IE3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Z63 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
IE3 S1  S1  S 0 1 N N N 25.498 8.518  100.633 3.361  -1.732 0.072  S1  IE3 1  
IE3 C10 C1  C 0 1 Y N N 24.639 7.561  101.745 1.630  -1.916 0.344  C10 IE3 2  
IE3 C11 C2  C 0 1 Y N N 25.474 6.642  102.534 1.035  -3.176 0.235  C11 IE3 3  
IE3 C12 C3  C 0 1 Y N N 24.853 5.830  103.475 -0.328 -3.324 0.449  C12 IE3 4  
IE3 C13 C4  C 0 1 Y N N 23.461 5.845  103.596 -1.102 -2.229 0.770  C13 IE3 5  
IE3 C14 C5  C 0 1 Y N N 22.678 6.716  102.867 -0.515 -0.966 0.881  C14 IE3 6  
IE3 C15 C6  C 0 1 Y N N 23.270 7.556  101.909 0.859  -0.815 0.671  C15 IE3 7  
IE3 O7  O1  O 0 1 N N N 26.803 6.696  102.354 1.793  -4.258 -0.081 O7  IE3 8  
IE3 C16 C7  C 0 1 N N N 27.764 6.205  103.305 1.121  -5.515 -0.176 C16 IE3 9  
IE3 C17 C8  C 0 1 N N N 21.221 6.813  103.037 -1.343 0.206  1.223  C17 IE3 10 
IE3 O8  O2  O 0 1 N N N 20.728 7.921  102.801 -0.879 1.101  1.904  O8  IE3 11 
IE3 C18 C9  C 0 1 Y N N 20.322 5.703  103.486 -2.734 0.293  0.739  C18 IE3 12 
IE3 C19 C10 C 0 1 Y N N 20.620 4.369  103.208 -3.569 1.321  1.188  C19 IE3 13 
IE3 C20 C11 C 0 1 Y N N 19.757 3.364  103.657 -4.871 1.400  0.733  C20 IE3 14 
IE3 C21 C12 C 0 1 Y N N 18.524 3.710  104.365 -5.352 0.457  -0.172 C21 IE3 15 
IE3 C22 C13 C 0 1 Y N N 18.247 5.121  104.615 -4.523 -0.568 -0.621 C22 IE3 16 
IE3 C23 C14 C 0 1 Y N N 19.143 6.075  104.153 -3.218 -0.648 -0.174 C23 IE3 17 
IE3 O11 O3  O 0 1 N N N 17.098 5.438  105.290 -4.997 -1.487 -1.504 O11 IE3 18 
IE3 O10 O4  O 0 1 N N N 17.629 2.751  104.740 -6.634 0.537  -0.617 O10 IE3 19 
IE3 O9  O5  O 0 1 N N N 20.018 2.019  103.378 -5.683 2.400  1.169  O9  IE3 20 
IE3 C26 C15 C 0 1 N N N 16.687 6.819  105.362 -4.092 -2.511 -1.922 C26 IE3 21 
IE3 C25 C16 C 0 1 N N N 17.411 2.573  106.159 -6.863 1.309  -1.798 C25 IE3 22 
IE3 C24 C17 C 0 1 N N N 21.415 1.721  103.121 -5.124 3.332  2.097  C24 IE3 23 
IE3 C1  C18 C 0 1 N N S 24.316 9.665  99.959  3.628  0.043  0.334  C1  IE3 24 
IE3 O5  O6  O 0 1 N N N 23.662 9.043  98.842  2.936  0.783  -0.673 O5  IE3 25 
IE3 C5  C19 C 0 1 N N R 22.685 9.869  98.210  3.060  2.201  -0.544 C5  IE3 26 
IE3 C6  C20 C 0 1 N N N 22.207 9.133  97.046  2.259  2.886  -1.654 C6  IE3 27 
IE3 O6  O7  O 0 1 N N N 21.337 8.092  97.495  0.868  2.610  -1.477 O6  IE3 28 
IE3 C4  C21 C 0 1 N N R 23.291 11.192 97.748  4.534  2.596  -0.660 C4  IE3 29 
IE3 O4  O8  O 0 1 N N N 24.242 10.929 96.681  5.025  2.235  -1.953 O4  IE3 30 
IE3 C3  C22 C 0 1 N N S 24.075 11.867 98.843  5.338  1.859  0.415  C3  IE3 31 
IE3 O3  O9  O 0 1 N N N 24.791 13.030 98.369  6.726  2.165  0.268  O3  IE3 32 
IE3 C2  C23 C 0 1 N N R 25.038 10.879 99.462  5.126  0.351  0.254  C2  IE3 33 
IE3 O2  O10 O 0 1 N N N 25.683 11.558 100.490 5.813  -0.343 1.297  O2  IE3 34 
IE3 H1  H1  H 0 1 N N N 25.445 5.189  104.111 -0.783 -4.299 0.363  H1  IE3 35 
IE3 H2  H2  H 0 1 N N N 22.985 5.156  104.279 -2.162 -2.348 0.935  H2  IE3 36 
IE3 H3  H3  H 0 1 N N N 22.652 8.199  101.300 1.317  0.159  0.760  H3  IE3 37 
IE3 H4  H4  H 0 1 N N N 28.780 6.369  102.918 1.840  -6.293 -0.434 H4  IE3 38 
IE3 H5  H5  H 0 1 N N N 27.644 6.742  104.258 0.657  -5.752 0.781  H5  IE3 39 
IE3 H6  H6  H 0 1 N N N 27.602 5.129  103.467 0.353  -5.459 -0.948 H6  IE3 40 
IE3 H7  H7  H 0 1 N N N 21.509 4.114  102.651 -3.196 2.053  1.890  H7  IE3 41 
IE3 H8  H8  H 0 1 N N N 18.930 7.122  104.309 -2.574 -1.441 -0.525 H8  IE3 42 
IE3 H9  H9  H 0 1 N N N 15.752 6.894  105.936 -4.595 -3.176 -2.624 H9  IE3 43 
IE3 H10 H10 H 0 1 N N N 17.471 7.409  105.859 -3.228 -2.057 -2.407 H10 IE3 44 
IE3 H11 H11 H 0 1 N N N 16.525 7.207  104.345 -3.763 -3.082 -1.054 H11 IE3 45 
IE3 H12 H12 H 0 1 N N N 16.672 1.775  106.320 -6.292 0.887  -2.624 H12 IE3 46 
IE3 H13 H13 H 0 1 N N N 18.359 2.297  106.644 -7.925 1.290  -2.043 H13 IE3 47 
IE3 H14 H14 H 0 1 N N N 17.037 3.512  106.593 -6.548 2.338  -1.626 H14 IE3 48 
IE3 H15 H15 H 0 1 N N N 21.529 0.647  102.912 -4.803 2.803  2.994  H15 IE3 49 
IE3 H16 H16 H 0 1 N N N 21.760 2.302  102.253 -4.268 3.829  1.641  H16 IE3 50 
IE3 H17 H17 H 0 1 N N N 22.015 1.988  104.003 -5.876 4.075  2.363  H17 IE3 51 
IE3 H18 H18 H 0 1 N N N 23.609 9.925  100.760 3.251  0.326  1.317  H18 IE3 52 
IE3 H19 H19 H 0 1 N N N 21.850 10.074 98.896  2.675  2.512  0.427  H19 IE3 53 
IE3 H20 H20 H 0 1 N N N 23.061 8.697  96.506  2.424  3.962  -1.610 H20 IE3 54 
IE3 H21 H21 H 0 1 N N N 21.659 9.812  96.377  2.584  2.508  -2.623 H21 IE3 55 
IE3 H22 H22 H 0 1 N N N 21.016 7.602  96.747  0.299  3.014  -2.146 H22 IE3 56 
IE3 H23 H23 H 0 1 N N N 22.491 11.860 97.396  4.635  3.672  -0.518 H23 IE3 57 
IE3 H24 H24 H 0 1 N N N 24.624 11.748 96.388  5.955  2.457  -2.097 H24 IE3 58 
IE3 H25 H25 H 0 1 N N N 23.366 12.182 99.623  4.997  2.171  1.403  H25 IE3 59 
IE3 H26 H26 H 0 1 N N N 25.270 13.423 99.089  7.296  1.731  0.919  H26 IE3 60 
IE3 H27 H27 H 0 1 N N N 25.764 10.570 98.695  5.512  0.031  -0.714 H27 IE3 61 
IE3 H28 H28 H 0 1 N N N 26.303 10.977 100.914 5.721  -1.305 1.256  H28 IE3 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
IE3 O4  C4  SING N N 1  
IE3 C6  O6  SING N N 2  
IE3 C6  C5  SING N N 3  
IE3 C4  C5  SING N N 4  
IE3 C4  C3  SING N N 5  
IE3 C5  O5  SING N N 6  
IE3 O3  C3  SING N N 7  
IE3 O5  C1  SING N N 8  
IE3 C3  C2  SING N N 9  
IE3 C2  C1  SING N N 10 
IE3 C2  O2  SING N N 11 
IE3 C1  S1  SING N N 12 
IE3 S1  C10 SING N N 13 
IE3 C10 C15 DOUB Y N 14 
IE3 C10 C11 SING Y N 15 
IE3 C15 C14 SING Y N 16 
IE3 O7  C11 SING N N 17 
IE3 O7  C16 SING N N 18 
IE3 C11 C12 DOUB Y N 19 
IE3 O8  C17 DOUB N N 20 
IE3 C14 C17 SING N N 21 
IE3 C14 C13 DOUB Y N 22 
IE3 C17 C18 SING N N 23 
IE3 C24 O9  SING N N 24 
IE3 C19 C18 DOUB Y N 25 
IE3 C19 C20 SING Y N 26 
IE3 O9  C20 SING N N 27 
IE3 C12 C13 SING Y N 28 
IE3 C18 C23 SING Y N 29 
IE3 C20 C21 DOUB Y N 30 
IE3 C23 C22 DOUB Y N 31 
IE3 C21 C22 SING Y N 32 
IE3 C21 O10 SING N N 33 
IE3 C22 O11 SING N N 34 
IE3 O10 C25 SING N N 35 
IE3 O11 C26 SING N N 36 
IE3 C12 H1  SING N N 37 
IE3 C13 H2  SING N N 38 
IE3 C15 H3  SING N N 39 
IE3 C16 H4  SING N N 40 
IE3 C16 H5  SING N N 41 
IE3 C16 H6  SING N N 42 
IE3 C19 H7  SING N N 43 
IE3 C23 H8  SING N N 44 
IE3 C26 H9  SING N N 45 
IE3 C26 H10 SING N N 46 
IE3 C26 H11 SING N N 47 
IE3 C25 H12 SING N N 48 
IE3 C25 H13 SING N N 49 
IE3 C25 H14 SING N N 50 
IE3 C24 H15 SING N N 51 
IE3 C24 H16 SING N N 52 
IE3 C24 H17 SING N N 53 
IE3 C1  H18 SING N N 54 
IE3 C5  H19 SING N N 55 
IE3 C6  H20 SING N N 56 
IE3 C6  H21 SING N N 57 
IE3 O6  H22 SING N N 58 
IE3 C4  H23 SING N N 59 
IE3 O4  H24 SING N N 60 
IE3 C3  H25 SING N N 61 
IE3 O3  H26 SING N N 62 
IE3 C2  H27 SING N N 63 
IE3 O2  H28 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
IE3 InChI            InChI                1.06  "InChI=1S/C23H28O10S/c1-29-13-6-5-11(18(25)12-7-14(30-2)22(32-4)15(8-12)31-3)9-17(13)34-23-21(28)20(27)19(26)16(10-24)33-23/h5-9,16,19-21,23-24,26-28H,10H2,1-4H3/t16-,19+,20+,21-,23+/m1/s1" 
IE3 InChIKey         InChI                1.06  MGBZLSXWJZVCBJ-YNIWLMFPSA-N                                                                                                                                                                   
IE3 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(cc1S[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)C(=O)c3cc(OC)c(OC)c(OC)c3"                                                                                                              
IE3 SMILES           CACTVS               3.385 "COc1ccc(cc1S[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)C(=O)c3cc(OC)c(OC)c(OC)c3"                                                                                                                    
IE3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1S[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)C(=O)c3cc(c(c(c3)OC)OC)OC"                                                                                                            
IE3 SMILES           "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1SC2C(C(C(C(O2)CO)O)O)O)C(=O)c3cc(c(c(c3)OC)OC)OC"                                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           IE3 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[3-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-4-methoxy-phenyl]-(3,4,5-trimethoxyphenyl)methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
IE3 "Create component"  2022-03-11 PDBE 
IE3 "Modify descriptor" 2022-08-22 RCSB 
IE3 "Initial release"   2023-01-18 RCSB 
# 
