data_KZ3
# 
_chem_comp.id                                    KZ3 
_chem_comp.name                                  "(2R,3R,4S,5S,6R)-2-[3-[(4-cyclopropylphenyl)methyl]-4-fluoranyl-indol-1-yl]-6-(hydroxymethyl)oxane-3,4,5-triol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H26 F N O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-01 
_chem_comp.pdbx_modified_date                    2023-10-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        427.465 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KZ3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8HB0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KZ3 C1  C1  C 0 1 N N R 65.311 68.597 71.469 -3.500 -2.117 0.458  C1  KZ3 1  
KZ3 C2  C2  C 0 1 N N S 64.452 67.572 70.738 -4.707 -1.573 -0.310 C2  KZ3 2  
KZ3 C3  C3  C 0 1 N N S 65.291 66.366 70.347 -4.861 -0.078 -0.014 C3  KZ3 3  
KZ3 C4  C4  C 0 1 N N R 66.021 65.801 71.556 -3.561 0.641  -0.389 C4  KZ3 4  
KZ3 C5  C5  C 0 1 N N R 66.819 66.926 72.207 -2.398 0.012  0.383  C5  KZ3 5  
KZ3 C6  C6  C 0 1 N N N 64.511 69.761 72.007 -3.304 -3.596 0.120  C6  KZ3 6  
KZ3 C8  C7  C 0 1 Y N N 67.860 65.346 75.335 0.761  1.017  -1.095 C8  KZ3 7  
KZ3 C9  C8  C 0 1 Y N N 68.619 67.015 73.967 -0.647 1.821  0.528  C9  KZ3 8  
KZ3 C13 C9  C 0 1 Y N N 70.561 68.343 74.271 -0.368 3.802  1.849  C13 KZ3 9  
KZ3 C18 C10 C 0 1 Y N N 65.575 66.351 78.863 5.048  0.267  -0.010 C18 KZ3 10 
KZ3 C19 C11 C 0 1 Y N N 66.143 66.089 80.101 5.138  -1.112 -0.038 C19 KZ3 11 
KZ3 C20 C12 C 0 1 Y N N 67.255 65.260 80.135 4.187  -1.853 -0.715 C20 KZ3 12 
KZ3 C21 C13 C 0 1 Y N N 67.774 64.716 78.976 3.147  -1.215 -1.364 C21 KZ3 13 
KZ3 C22 C14 C 0 1 N N N 65.579 66.678 81.350 6.273  -1.809 0.668  C22 KZ3 14 
KZ3 C23 C15 C 0 1 N N N 64.112 66.844 81.574 6.434  -3.312 0.435  C23 KZ3 15 
KZ3 O1  O1  O 0 1 N N N 65.948 67.972 72.587 -2.331 -1.384 0.085  O1  KZ3 16 
KZ3 N1  N1  N 0 1 Y N N 67.458 66.490 73.437 -1.144 0.657  -0.014 N1  KZ3 17 
KZ3 O2  O2  O 0 1 N N N 64.465 65.360 69.758 -5.941 0.454  -0.784 O2  KZ3 18 
KZ3 O3  O3  O 0 1 N N N 66.914 64.764 71.149 -3.667 2.025  -0.049 O3  KZ3 19 
KZ3 O4  O4  O 0 1 N N N 63.892 68.178 69.576 -5.887 -2.266 0.102  O4  KZ3 20 
KZ3 C7  C16 C 0 1 Y N N 67.006 65.477 74.277 -0.290 0.191  -0.977 C7  KZ3 21 
KZ3 C10 C17 C 0 1 Y N N 68.899 66.320 75.157 0.568  2.097  -0.124 C10 KZ3 22 
KZ3 C11 C18 C 0 1 Y N N 70.031 66.650 75.909 1.305  3.233  0.225  C11 KZ3 23 
KZ3 C12 C19 C 0 1 Y N N 70.854 67.663 75.456 0.832  4.076  1.208  C12 KZ3 24 
KZ3 C14 C20 C 0 1 Y N N 69.450 68.033 73.515 -1.103 2.685  1.520  C14 KZ3 25 
KZ3 O5  O5  O 0 1 N N N 65.360 70.848 72.372 -2.250 -4.133 0.922  O5  KZ3 26 
KZ3 F1  F1  F 0 1 N N N 70.330 66.010 77.050 2.473  3.502  -0.398 F1  KZ3 27 
KZ3 C15 C21 C 0 1 N N N 67.774 64.386 76.487 1.923  0.861  -2.042 C15 KZ3 28 
KZ3 C16 C22 C 0 1 Y N N 67.203 64.982 77.752 3.057  0.164  -1.335 C16 KZ3 29 
KZ3 C17 C23 C 0 1 Y N N 66.100 65.804 77.708 4.004  0.905  -0.654 C17 KZ3 30 
KZ3 C24 C24 C 0 1 N N N 64.955 68.034 81.394 5.912  -2.798 1.778  C24 KZ3 31 
KZ3 H1  H1  H 0 1 N N N 66.070 68.981 70.772 -3.671 -2.008 1.529  H1  KZ3 32 
KZ3 H2  H2  H 0 1 N N N 63.650 67.240 71.413 -4.554 -1.719 -1.380 H2  KZ3 33 
KZ3 H3  H3  H 0 1 N N N 66.044 66.695 69.615 -5.063 0.064  1.048  H3  KZ3 34 
KZ3 H4  H4  H 0 1 N N N 65.285 65.416 72.277 -3.385 0.541  -1.459 H4  KZ3 35 
KZ3 H5  H5  H 0 1 N N N 67.576 67.289 71.496 -2.555 0.149  1.453  H5  KZ3 36 
KZ3 H6  H6  H 0 1 N N N 63.807 70.100 71.233 -4.227 -4.140 0.321  H6  KZ3 37 
KZ3 H7  H7  H 0 1 N N N 63.950 69.431 72.894 -3.045 -3.697 -0.934 H7  KZ3 38 
KZ3 H8  H8  H 0 1 N N N 71.221 69.131 73.939 -0.728 4.471  2.617  H8  KZ3 39 
KZ3 H9  H9  H 0 1 N N N 64.709 66.993 78.801 5.791  0.845  0.519  H9  KZ3 40 
KZ3 H10 H10 H 0 1 N N N 67.722 65.036 81.083 4.257  -2.931 -0.738 H10 KZ3 41 
KZ3 H11 H11 H 0 1 N N N 68.640 64.073 79.031 2.404  -1.793 -1.893 H11 KZ3 42 
KZ3 H12 H12 H 0 1 N N N 66.141 66.417 82.259 7.180  -1.218 0.795  H12 KZ3 43 
KZ3 H13 H13 H 0 1 N N N 63.401 66.552 80.788 5.719  -3.798 -0.230 H13 KZ3 44 
KZ3 H14 H14 H 0 1 N N N 63.679 66.622 82.561 7.448  -3.711 0.407  H14 KZ3 45 
KZ3 H15 H15 H 0 1 N N N 64.999 64.612 69.518 -6.795 0.038  -0.602 H15 KZ3 46 
KZ3 H16 H16 H 0 1 N N N 67.365 64.417 71.910 -4.388 2.487  -0.498 H16 KZ3 47 
KZ3 H17 H17 H 0 1 N N N 63.370 68.930 69.831 -6.693 -1.972 -0.346 H17 KZ3 48 
KZ3 H18 H18 H 0 1 N N N 66.117 64.885 74.117 -0.441 -0.708 -1.557 H18 KZ3 49 
KZ3 H19 H19 H 0 1 N N N 71.733 67.932 76.023 1.398  4.955  1.480  H19 KZ3 50 
KZ3 H20 H20 H 0 1 N N N 69.233 68.565 72.600 -2.035 2.483  2.026  H20 KZ3 51 
KZ3 H21 H21 H 0 1 N N N 64.833 71.564 72.706 -2.070 -5.069 0.761  H21 KZ3 52 
KZ3 H22 H22 H 0 1 N N N 67.136 63.542 76.185 1.612  0.268  -2.903 H22 KZ3 53 
KZ3 H23 H23 H 0 1 N N N 68.788 64.019 76.706 2.252  1.844  -2.378 H23 KZ3 54 
KZ3 H24 H24 H 0 1 N N N 65.638 66.025 76.757 3.932  1.982  -0.628 H24 KZ3 55 
KZ3 H25 H25 H 0 1 N N N 65.152 68.701 82.246 6.583  -2.859 2.635  H25 KZ3 56 
KZ3 H26 H26 H 0 1 N N N 64.873 68.630 80.473 4.855  -2.945 1.998  H26 KZ3 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KZ3 O4  C2  SING N N 1  
KZ3 O2  C3  SING N N 2  
KZ3 C3  C2  SING N N 3  
KZ3 C3  C4  SING N N 4  
KZ3 C2  C1  SING N N 5  
KZ3 O3  C4  SING N N 6  
KZ3 C1  C6  SING N N 7  
KZ3 C1  O1  SING N N 8  
KZ3 C4  C5  SING N N 9  
KZ3 C6  O5  SING N N 10 
KZ3 C5  O1  SING N N 11 
KZ3 C5  N1  SING N N 12 
KZ3 N1  C9  SING Y N 13 
KZ3 N1  C7  SING Y N 14 
KZ3 C14 C9  DOUB Y N 15 
KZ3 C14 C13 SING Y N 16 
KZ3 C9  C10 SING Y N 17 
KZ3 C13 C12 DOUB Y N 18 
KZ3 C7  C8  DOUB Y N 19 
KZ3 C10 C8  SING Y N 20 
KZ3 C10 C11 DOUB Y N 21 
KZ3 C8  C15 SING N N 22 
KZ3 C12 C11 SING Y N 23 
KZ3 C11 F1  SING N N 24 
KZ3 C15 C16 SING N N 25 
KZ3 C17 C16 DOUB Y N 26 
KZ3 C17 C18 SING Y N 27 
KZ3 C16 C21 SING Y N 28 
KZ3 C18 C19 DOUB Y N 29 
KZ3 C21 C20 DOUB Y N 30 
KZ3 C19 C20 SING Y N 31 
KZ3 C19 C22 SING N N 32 
KZ3 C22 C24 SING N N 33 
KZ3 C22 C23 SING N N 34 
KZ3 C24 C23 SING N N 35 
KZ3 C1  H1  SING N N 36 
KZ3 C2  H2  SING N N 37 
KZ3 C3  H3  SING N N 38 
KZ3 C4  H4  SING N N 39 
KZ3 C5  H5  SING N N 40 
KZ3 C6  H6  SING N N 41 
KZ3 C6  H7  SING N N 42 
KZ3 C13 H8  SING N N 43 
KZ3 C18 H9  SING N N 44 
KZ3 C20 H10 SING N N 45 
KZ3 C21 H11 SING N N 46 
KZ3 C22 H12 SING N N 47 
KZ3 C23 H13 SING N N 48 
KZ3 C23 H14 SING N N 49 
KZ3 O2  H15 SING N N 50 
KZ3 O3  H16 SING N N 51 
KZ3 O4  H17 SING N N 52 
KZ3 C7  H18 SING N N 53 
KZ3 C12 H19 SING N N 54 
KZ3 C14 H20 SING N N 55 
KZ3 O5  H21 SING N N 56 
KZ3 C15 H22 SING N N 57 
KZ3 C15 H23 SING N N 58 
KZ3 C17 H24 SING N N 59 
KZ3 C24 H25 SING N N 60 
KZ3 C24 H26 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KZ3 InChI            InChI                1.06  "InChI=1S/C24H26FNO5/c25-17-2-1-3-18-20(17)16(10-13-4-6-14(7-5-13)15-8-9-15)11-26(18)24-23(30)22(29)21(28)19(12-27)31-24/h1-7,11,15,19,21-24,27-30H,8-10,12H2/t19-,21-,22+,23-,24-/m1/s1" 
KZ3 InChIKey         InChI                1.06  PXRGAWZIQZMHTH-PFKOEMKTSA-N                                                                                                                                                               
KZ3 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)n2cc(Cc3ccc(cc3)C4CC4)c5c(F)cccc25"                                                                                                             
KZ3 SMILES           CACTVS               3.385 "OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)n2cc(Cc3ccc(cc3)C4CC4)c5c(F)cccc25"                                                                                                                    
KZ3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)F)c(cn2[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)Cc4ccc(cc4)C5CC5"                                                                                                         
KZ3 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)F)c(cn2C3C(C(C(C(O3)CO)O)O)O)Cc4ccc(cc4)C5CC5"                                                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           KZ3 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[3-[(4-cyclopropylphenyl)methyl]-4-fluoranyl-indol-1-yl]-6-(hydroxymethyl)oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KZ3 "Create component" 2022-11-01 PDBJ 
KZ3 "Initial release"  2023-11-01 RCSB 
# 
