data_684
#

_chem_comp.id                                   684
_chem_comp.name                                 "4-({5-[(2,4-diaminopteridin-6-yl)methyl]-5H-dibenzo[b,f]azepin-2-yl}oxy)butanoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H23 N7 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        PT684
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-06-02
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       469.495
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    684
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3S7A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
684  N1    N1    N  0  1  Y  N  N  19.260  11.093  10.442    6.673   0.616  -0.105  N1    684   1  
684  C2    C2    C  0  1  Y  N  N  18.835  11.106   9.162    7.088   1.820   0.234  C2    684   2  
684  N2    N2    N  0  1  N  N  N  18.319  12.249   8.712    8.432   1.998   0.502  N2    684   3  
684  N3    N3    N  0  1  Y  N  N  18.941   9.997   8.376    6.282   2.874   0.331  N3    684   4  
684  C4    C4    C  0  1  Y  N  N  19.434   8.845   8.856    4.984   2.772   0.088  C4    684   5  
684  N4    N4    N  0  1  N  N  N  19.537   7.749   8.071    4.151   3.865   0.189  N4    684   6  
684  N5    N5    N  0  1  Y  N  N  20.416   7.737  10.734    3.177   1.255  -0.557  N5    684   7  
684  C6    C6    C  0  1  Y  N  N  20.818   7.724  12.016    2.765   0.052  -0.896  C6    684   8  
684  C7    C7    C  0  1  Y  N  N  20.717   8.892  12.788    3.665  -1.010  -0.979  C7    684   9  
684  N8    N8    N  0  1  Y  N  N  20.196   9.983  12.258    4.943  -0.832  -0.721  N8    684  10  
684  C9    C9    C  0  1  N  N  N  21.441   6.414  12.549    1.307  -0.181  -1.195  C9    684  11  
684  N10   N10   N  0  1  N  N  N  21.305   6.155  13.982    0.584  -0.436   0.058  N10   684  12  
684  C4A   C4A   C  0  1  Y  N  N  19.862   8.828  10.208    4.464   1.457  -0.293  C4A   684  13  
684  C8A   C8A   C  0  1  Y  N  N  19.775   9.970  10.973    5.383   0.381  -0.377  C8A   684  14  
684  OAC   OAC   O  0  1  N  N  N  13.855   8.060  19.661   -9.765   0.659  -0.456  OAC   684  15  
684  OAD   OAD   O  0  1  N  N  N  15.287   9.721  20.048  -10.247   2.292   0.952  OAD   684  16  
684  CAE   CAE   C  0  1  Y  N  N  24.633   4.902  16.102    1.920  -3.930   1.926  CAE   684  17  
684  CAF   CAF   C  0  1  Y  N  N  24.375   4.449  14.808    2.033  -2.769   2.536  CAF   684  18  
684  CAG   CAG   C  0  1  Y  N  N  17.815   5.498  13.979   -2.908   0.588   0.458  CAG   684  19  
684  CAH   CAH   C  0  1  Y  N  N  23.775   5.803  16.727    1.336  -3.996   0.576  CAH   684  20  
684  CAI   CAI   C  0  1  Y  N  N  23.235   4.890  14.116    1.568  -1.540   1.873  CAI   684  21  
684  CAJ   CAJ   C  0  1  Y  N  N  19.153   5.561  13.611   -1.604   0.543   0.609  CAJ   684  22  
684  CAK   CAK   C  0  1  N  N  N  21.874   7.109  16.781    0.361  -2.957  -1.372  CAK   684  23  
684  CAL   CAL   C  0  1  N  N  N  20.496   7.270  16.642   -0.629  -2.235  -1.780  CAL   684  24  
684  CAN   CAN   C  0  1  Y  N  N  18.334   6.583  16.069   -2.846  -1.204  -1.153  CAN   684  25  
684  CAO   CAO   C  0  1  N  N  N  15.388   7.432  17.426   -7.131   0.552  -0.177  CAO   684  26  
684  CAP   CAP   C  0  1  N  N  N  15.861   6.041  17.008   -5.637   0.660   0.134  CAP   684  27  
684  CAQ   CAQ   C  0  1  N  N  N  16.020   7.851  18.760   -7.901   1.585   0.648  CAQ   684  28  
684  OAW   OAW   O  0  1  N  N  N  16.076   5.933  15.561   -4.918  -0.305  -0.636  OAW   684  29  
684  CAX   CAX   C  0  1  N  N  N  14.977   8.596  19.589   -9.372   1.478   0.341  CAX   684  30  
684  CBA   CBA   C  0  1  Y  N  N  17.400   6.019  15.208   -3.566  -0.341  -0.476  CBA   684  31  
684  CBC   CBC   C  0  1  Y  N  N  22.657   6.239  16.024    0.925  -2.895  -0.018  CBC   684  32  
684  CBD   CBD   C  0  1  Y  N  N  19.683   6.639  15.696   -1.376  -1.254  -0.988  CBD   684  33  
684  CBF   CBF   C  0  1  Y  N  N  22.384   5.794  14.733    1.038  -1.599   0.667  CBF   684  34  
684  CBG   CBG   C  0  1  Y  N  N  20.075   6.149  14.480   -0.792  -0.432  -0.151  CBG   684  35  
684  HN2   HN2   H  0  1  N  N  N  18.338  12.934   9.441    9.042   1.246   0.439  HN2   684  36  
684  HN2A  HN2A  H  0  0  N  N  N  18.858  12.575   7.935    8.765   2.873   0.754  HN2A  684  37  
684  HN4   HN4   H  0  1  N  N  N  19.201   7.963   7.154    4.514   4.728   0.442  HN4   684  38  
684  HN4A  HN4A  H  0  0  N  N  N  20.495   7.466   8.018    3.203   3.771   0.007  HN4A  684  39  
684  H7    H7    H  0  1  N  N  N  21.064   8.898  13.811    3.308  -1.991  -1.258  H7    684  40  
684  H9    H9    H  0  1  N  N  N  20.948   5.584  12.022    0.891   0.702  -1.682  H9    684  41  
684  H9A   H9A   H  0  1  N  N  N  22.518   6.455  12.328    1.204  -1.042  -1.856  H9A   684  42  
684  HOAD  HOAD  H  0  0  N  N  N  14.529  10.113  20.466  -11.180   2.186   0.723  HOAD  684  43  
684  HAE   HAE   H  0  1  N  N  N  25.509   4.549  16.626    2.256  -4.832   2.415  HAE   684  44  
684  HAF   HAF   H  0  1  N  N  N  25.055   3.756  14.336    2.468  -2.718   3.524  HAF   684  45  
684  HAG   HAG   H  0  1  N  N  N  17.094   5.046  13.314   -3.494   1.302   1.017  HAG   684  46  
684  HAH   HAH   H  0  1  N  N  N  23.972   6.153  17.729    1.244  -4.947   0.073  HAH   684  47  
684  HAI   HAI   H  0  1  N  N  N  23.025   4.531  13.119    1.660  -0.588   2.376  HAI   684  48  
684  HAJ   HAJ   H  0  1  N  N  N  19.477   5.159  12.662   -1.121   1.224   1.294  HAJ   684  49  
684  HAK   HAK   H  0  1  N  N  N  22.373   7.704  17.532    0.802  -3.652  -2.072  HAK   684  50  
684  HAL   HAL   H  0  1  N  N  N  20.011   7.946  17.330   -0.937  -2.367  -2.807  HAL   684  51  
684  HAN   HAN   H  0  1  N  N  N  18.020   6.977  17.024   -3.331  -1.885  -1.837  HAN   684  52  
684  HAO   HAO   H  0  1  N  N  N  15.678   8.156  16.650   -7.296   0.738  -1.238  HAO   684  53  
684  HAOA  HAOA  H  0  0  N  N  N  14.294   7.419  17.538   -7.483  -0.449   0.074  HAOA  684  54  
684  HAP   HAP   H  0  1  N  N  N  16.812   5.828  17.519   -5.286   1.661  -0.117  HAP   684  55  
684  HAPA  HAPA  H  0  0  N  N  N  15.094   5.309  17.302   -5.473   0.474   1.196  HAPA  684  56  
684  HAQ   HAQ   H  0  1  N  N  N  16.358   6.958  19.306   -7.737   1.398   1.709  HAQ   684  57  
684  HAQA  HAQA  H  0  0  N  N  N  16.881   8.509  18.571   -7.549   2.586   0.396  HAQA  684  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
684  C2   N1    DOUB  Y  N   1  
684  N1   C8A   SING  Y  N   2  
684  N3   C2    SING  Y  N   3  
684  N2   C2    SING  N  N   4  
684  N2   HN2   SING  N  N   5  
684  N2   HN2A  SING  N  N   6  
684  N3   C4    DOUB  Y  N   7  
684  N4   C4    SING  N  N   8  
684  C4   C4A   SING  Y  N   9  
684  N4   HN4   SING  N  N  10  
684  N4   HN4A  SING  N  N  11  
684  C4A  N5    DOUB  Y  N  12  
684  N5   C6    SING  Y  N  13  
684  C6   C9    SING  N  N  14  
684  C6   C7    DOUB  Y  N  15  
684  N8   C7    SING  Y  N  16  
684  C7   H7    SING  N  N  17  
684  C8A  N8    DOUB  Y  N  18  
684  C9   N10   SING  N  N  19  
684  C9   H9    SING  N  N  20  
684  C9   H9A   SING  N  N  21  
684  N10  CBG   SING  N  N  22  
684  N10  CBF   SING  N  N  23  
684  C4A  C8A   SING  Y  N  24  
684  CAX  OAC   DOUB  N  N  25  
684  CAX  OAD   SING  N  N  26  
684  OAD  HOAD  SING  N  N  27  
684  CAF  CAE   DOUB  Y  N  28  
684  CAE  CAH   SING  Y  N  29  
684  CAE  HAE   SING  N  N  30  
684  CAI  CAF   SING  Y  N  31  
684  CAF  HAF   SING  N  N  32  
684  CAJ  CAG   DOUB  Y  N  33  
684  CAG  CBA   SING  Y  N  34  
684  CAG  HAG   SING  N  N  35  
684  CBC  CAH   DOUB  Y  N  36  
684  CAH  HAH   SING  N  N  37  
684  CAI  CBF   DOUB  Y  N  38  
684  CAI  HAI   SING  N  N  39  
684  CAJ  CBG   SING  Y  N  40  
684  CAJ  HAJ   SING  N  N  41  
684  CBC  CAK   SING  N  N  42  
684  CAL  CAK   DOUB  N  N  43  
684  CAK  HAK   SING  N  N  44  
684  CBD  CAL   SING  N  N  45  
684  CAL  HAL   SING  N  N  46  
684  CBA  CAN   DOUB  Y  N  47  
684  CBD  CAN   SING  Y  N  48  
684  CAN  HAN   SING  N  N  49  
684  CAP  CAO   SING  N  N  50  
684  CAO  CAQ   SING  N  N  51  
684  CAO  HAO   SING  N  N  52  
684  CAO  HAOA  SING  N  N  53  
684  OAW  CAP   SING  N  N  54  
684  CAP  HAP   SING  N  N  55  
684  CAP  HAPA  SING  N  N  56  
684  CAQ  CAX   SING  N  N  57  
684  CAQ  HAQ   SING  N  N  58  
684  CAQ  HAQA  SING  N  N  59  
684  CBA  OAW   SING  N  N  60  
684  CBF  CBC   SING  Y  N  61  
684  CBG  CBD   DOUB  Y  N  62  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
684  SMILES            ACDLabs               12.01  "O=C(O)CCCOc3cc2C=Cc1c(cccc1)N(c2cc3)Cc4nc5c(nc4)nc(nc5N)N"  
684  SMILES_CANONICAL  CACTVS                3.370  "Nc1nc(N)c2nc(CN3c4ccccc4C=Cc5cc(OCCCC(O)=O)ccc35)cnc2n1"  
684  SMILES            CACTVS                3.370  "Nc1nc(N)c2nc(CN3c4ccccc4C=Cc5cc(OCCCC(O)=O)ccc35)cnc2n1"  
684  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "c1ccc2c(c1)C=Cc3cc(ccc3N2Cc4cnc5c(n4)c(nc(n5)N)N)OCCCC(=O)O"  
684  SMILES            "OpenEye OEToolkits"  1.7.2  "c1ccc2c(c1)C=Cc3cc(ccc3N2Cc4cnc5c(n4)c(nc(n5)N)N)OCCCC(=O)O"  
684  InChI             InChI                 1.03   "InChI=1S/C25H23N7O3/c26-23-22-24(31-25(27)30-23)28-13-17(29-22)14-32-19-5-2-1-4-15(19)7-8-16-12-18(9-10-20(16)32)35-11-3-6-21(33)34/h1-2,4-5,7-10,12-13H,3,6,11,14H2,(H,33,34)(H4,26,27,28,30,31)"  
684  InChIKey          InChI                 1.03   ORMJWSHZQMNLEH-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
684  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-({5-[(2,4-diaminopteridin-6-yl)methyl]-5H-dibenzo[b,f]azepin-2-yl}oxy)butanoic acid"  
684  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.2  "4-[11-[[2,4-bis(azanyl)pteridin-6-yl]methyl]benzo[b][1]benzazepin-3-yl]oxybutanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
684  "Create component"      2011-06-02  RCSB  
684  "Modify aromatic_flag"  2011-06-04  RCSB  
684  "Modify descriptor"     2011-06-04  RCSB  
684  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     684
_pdbx_chem_comp_synonyms.name        PT684
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
