data_8B4
# 
_chem_comp.id                                    8B4 
_chem_comp.name                                  "(1S)-1-(4-aminoimidazo[2,1-f][1,2,4]triazin-7-yl)-1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-2-methyl-D-ribitol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H16 F N5 O9 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-01-17 
_chem_comp.pdbx_modified_date                    2017-03-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        443.219 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8B4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5UJ2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8B4 C8    C1  C 0 1 Y N N 41.479 -46.130 7.501  4.586  -0.034 1.495  C8    8B4 1  
8B4 C6    C2  C 0 1 Y N N 39.870 -45.632 10.689 4.373  -3.073 -0.353 C6    8B4 2  
8B4 C5    C3  C 0 1 Y N N 40.390 -45.890 9.415  4.315  -1.829 0.322  C5    8B4 3  
8B4 "F2'" F1  F 0 1 N N N 38.149 -46.690 4.557  3.546  3.357  0.623  "F2'" 8B4 4  
8B4 "C2'" C4  C 0 1 N N R 39.089 -46.155 5.308  2.810  2.353  -0.016 "C2'" 8B4 5  
8B4 C2M   C5  C 0 1 N N N 38.415 -45.009 6.066  3.605  1.770  -1.186 C2M   8B4 6  
8B4 "C3'" C6  C 0 1 N N R 40.226 -45.688 4.420  1.452  2.904  -0.505 "C3'" 8B4 7  
8B4 "O3'" O1  O 0 1 N N N 39.789 -44.942 3.276  1.324  4.288  -0.172 "O3'" 8B4 8  
8B4 "C1'" C7  C 0 1 N N S 39.746 -47.288 6.119  2.429  1.241  0.987  "C1'" 8B4 9  
8B4 "O4'" O2  O 0 1 N N N 40.777 -47.805 5.267  1.099  0.834  0.598  "O4'" 8B4 10 
8B4 "C4'" C8  C 0 1 N N R 40.829 -47.035 4.053  0.408  2.062  0.261  "C4'" 8B4 11 
8B4 "C5'" C9  C 0 1 N N N 42.218 -46.984 3.388  -0.798 1.767  -0.634 "C5'" 8B4 12 
8B4 "O5'" O3  O 0 1 N N N 43.274 -46.556 4.258  -1.800 1.089  0.126  "O5'" 8B4 13 
8B4 PA    P1  P 0 1 N N N 44.312 -45.409 3.841  -3.209 0.623  -0.499 PA    8B4 14 
8B4 O1A   O4  O 0 1 N N N 45.193 -45.324 5.038  -4.061 1.921  -0.927 O1A   8B4 15 
8B4 O3A   O5  O 0 1 N N N 43.418 -44.061 3.855  -4.031 -0.220 0.599  O3A   8B4 16 
8B4 PB    P2  P 0 1 N N N 42.748 -43.316 2.582  -5.247 -1.271 0.521  PB    8B4 17 
8B4 O1B   O6  O 0 1 N N N 43.437 -41.963 2.488  -5.366 -2.059 1.920  O1B   8B4 18 
8B4 O2B   O7  O 0 1 N N N 41.307 -43.170 3.020  -6.621 -0.483 0.231  O2B   8B4 19 
8B4 O3B   O8  O 0 1 N N N 42.903 -44.249 1.399  -4.994 -2.239 -0.570 O3B   8B4 20 
8B4 O2A   O9  O 0 1 N N N 44.881 -45.724 2.482  -2.966 -0.222 -1.689 O2A   8B4 21 
8B4 C9    C10 C 0 1 Y N N 40.216 -46.699 7.401  3.386  0.082  0.874  C9    8B4 22 
8B4 N7    N1  N 0 1 Y N N 41.572 -45.644 8.775  5.134  -1.197 1.144  N7    8B4 23 
8B4 N6    N2  N 0 1 N N N 40.579 -44.983 11.636 5.461  -3.908 -0.185 N6    8B4 24 
8B4 N1    N3  N 0 1 Y N N 38.617 -46.027 10.997 3.367  -3.435 -1.128 N1    8B4 25 
8B4 C2    C11 C 0 1 Y N N 37.853 -46.663 10.090 2.307  -2.652 -1.308 C2    8B4 26 
8B4 N3    N4  N 0 1 Y N N 38.308 -46.930 8.856  2.191  -1.495 -0.712 N3    8B4 27 
8B4 N4    N5  N 0 1 Y N N 39.596 -46.522 8.553  3.209  -1.038 0.132  N4    8B4 28 
8B4 H1    H1  H 0 1 N N N 42.233 -46.081 6.730  5.027  0.695  2.159  H1    8B4 29 
8B4 H2    H2  H 0 1 N N N 37.602 -45.409 6.690  4.532  1.334  -0.814 H2    8B4 30 
8B4 H3    H3  H 0 1 N N N 39.156 -44.507 6.706  3.013  0.999  -1.679 H3    8B4 31 
8B4 H4    H4  H 0 1 N N N 38.003 -44.286 5.347  3.836  2.562  -1.898 H4    8B4 32 
8B4 H5    H5  H 0 1 N N N 40.948 -45.109 5.014  1.346  2.759  -1.580 H5    8B4 33 
8B4 H6    H6  H 0 1 N N N 39.422 -44.113 3.559  0.490  4.685  -0.456 H6    8B4 34 
8B4 H7    H7  H 0 1 N N N 38.993 -48.063 6.323  2.426  1.632  2.004  H7    8B4 35 
8B4 H8    H8  H 0 1 N N N 40.148 -47.503 3.327  0.092  2.580  1.166  H8    8B4 36 
8B4 H9    H9  H 0 1 N N N 42.461 -47.992 3.021  -1.204 2.703  -1.017 H9    8B4 37 
8B4 H10   H10 H 0 1 N N N 42.168 -46.287 2.539  -0.486 1.138  -1.467 H10   8B4 38 
8B4 H11   H11 H 0 1 N N N 46.092 -45.494 4.783  -4.258 2.521  -0.195 H11   8B4 39 
8B4 H12   H12 H 0 1 N N N 43.890 -41.895 1.656  -6.080 -2.711 1.945  H12   8B4 40 
8B4 H13   H13 H 0 1 N N N 40.751 -43.701 2.462  -6.851 0.169  0.907  H13   8B4 41 
8B4 H14   H14 H 0 1 N N N 40.026 -44.894 12.465 5.489  -4.765 -0.638 H14   8B4 42 
8B4 H15   H15 H 0 1 N N N 41.410 -45.500 11.843 6.196  -3.637 0.386  H15   8B4 43 
8B4 H16   H16 H 0 1 N N N 36.852 -46.965 10.361 1.509  -2.991 -1.952 H16   8B4 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8B4 O3B   PB    DOUB N N 1  
8B4 O2A   PA    DOUB N N 2  
8B4 O1B   PB    SING N N 3  
8B4 PB    O2B   SING N N 4  
8B4 PB    O3A   SING N N 5  
8B4 "O3'" "C3'" SING N N 6  
8B4 "C5'" "C4'" SING N N 7  
8B4 "C5'" "O5'" SING N N 8  
8B4 PA    O3A   SING N N 9  
8B4 PA    "O5'" SING N N 10 
8B4 PA    O1A   SING N N 11 
8B4 "C4'" "C3'" SING N N 12 
8B4 "C4'" "O4'" SING N N 13 
8B4 "C3'" "C2'" SING N N 14 
8B4 "F2'" "C2'" SING N N 15 
8B4 "O4'" "C1'" SING N N 16 
8B4 "C2'" C2M   SING N N 17 
8B4 "C2'" "C1'" SING N N 18 
8B4 "C1'" C9    SING N N 19 
8B4 C9    C8    DOUB Y N 20 
8B4 C9    N4    SING Y N 21 
8B4 C8    N7    SING Y N 22 
8B4 N4    N3    SING Y N 23 
8B4 N4    C5    SING Y N 24 
8B4 N7    C5    DOUB Y N 25 
8B4 N3    C2    DOUB Y N 26 
8B4 C5    C6    SING Y N 27 
8B4 C2    N1    SING Y N 28 
8B4 C6    N1    DOUB Y N 29 
8B4 C6    N6    SING N N 30 
8B4 C8    H1    SING N N 31 
8B4 C2M   H2    SING N N 32 
8B4 C2M   H3    SING N N 33 
8B4 C2M   H4    SING N N 34 
8B4 "C3'" H5    SING N N 35 
8B4 "O3'" H6    SING N N 36 
8B4 "C1'" H7    SING N N 37 
8B4 "C4'" H8    SING N N 38 
8B4 "C5'" H9    SING N N 39 
8B4 "C5'" H10   SING N N 40 
8B4 O1A   H11   SING N N 41 
8B4 O1B   H12   SING N N 42 
8B4 O2B   H13   SING N N 43 
8B4 N6    H14   SING N N 44 
8B4 N6    H15   SING N N 45 
8B4 C2    H16   SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8B4 SMILES           ACDLabs              12.01 "c2nc1c(ncnn1c2C3C(F)(C)C(O)C(O3)COP(OP(O)(O)=O)(O)=O)N"                                                                                                                                  
8B4 InChI            InChI                1.03  "InChI=1S/C11H16FN5O9P2/c1-11(12)7(18)6(3-24-28(22,23)26-27(19,20)21)25-8(11)5-2-14-10-9(13)15-4-16-17(5)10/h2,4,6-8,18H,3H2,1H3,(H,22,23)(H2,13,15,16)(H2,19,20,21)/t6-,7-,8+,11-/m1/s1" 
8B4 InChIKey         InChI                1.03  ITUZUOFEWXEZBP-HGIWHZBTSA-N                                                                                                                                                               
8B4 SMILES_CANONICAL CACTVS               3.385 "C[C@@]1(F)[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(O)=O)O[C@H]1c2cnc3n2ncnc3N"                                                                                                                 
8B4 SMILES           CACTVS               3.385 "C[C]1(F)[CH](O)[CH](CO[P](O)(=O)O[P](O)(O)=O)O[CH]1c2cnc3n2ncnc3N"                                                                                                                       
8B4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@]1([C@@H](O[C@@H]([C@H]1O)COP(=O)(O)OP(=O)(O)O)c2cnc3n2ncnc3N)F"                                                                                                                    
8B4 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1(C(OC(C1O)COP(=O)(O)OP(=O)(O)O)c2cnc3n2ncnc3N)F"                                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8B4 "SYSTEMATIC NAME" ACDLabs              12.01 "(1S)-1-(4-aminoimidazo[2,1-f][1,2,4]triazin-7-yl)-1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-2-methyl-D-ribitol"              
8B4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R},3~{R},4~{R},5~{S})-5-(4-azanylimidazo[2,1-f][1,2,4]triazin-7-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8B4 "Create component" 2017-01-17 RCSB 
8B4 "Modify atom id"   2017-03-15 RCSB 
8B4 "Initial release"  2017-03-22 RCSB 
# 
