data_DD4
#

_chem_comp.id                                   DD4
_chem_comp.name                                 "(3R,5R)-5-[3-(3-fluoro-4-methylphenyl)-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H14 F N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-10-23
_chem_comp.pdbx_modified_date                   2020-04-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       263.268
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DD4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5QBR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DD4  C4   C1   C  0  1  Y  N  N  -2.769   2.040  10.595   1.943   0.123   0.060  C4   DD4   1  
DD4  C5   C2   C  0  1  Y  N  N  -2.965   0.666  10.700   2.851  -0.917  -0.116  C5   DD4   2  
DD4  C6   C3   C  0  1  Y  N  N  -4.237   0.194  10.906   4.205  -0.645  -0.182  C6   DD4   3  
DD4  N1   N1   N  0  1  Y  N  N  -0.379   1.844  10.173  -0.076  -1.339   0.057  N1   DD4   4  
DD4  C7   C4   C  0  1  Y  N  N  -1.460   2.572  10.180   0.488  -0.163   0.138  C7   DD4   5  
DD4  C8   C5   C  0  1  Y  N  N  -0.012   3.907   9.484  -1.613   0.053   0.316  C8   DD4   6  
DD4  N2   N2   N  0  1  N  N  N   2.200   5.022   9.339  -3.811  -0.278   1.350  N2   DD4   7  
DD4  C9   C6   C  0  1  N  N  R   0.781   4.994   8.823  -3.007   0.604   0.476  C9   DD4   8  
DD4  C10  C7   C  0  1  N  N  N   0.250   6.403   9.075  -3.750   0.597  -0.883  C10  DD4   9  
DD4  C11  C8   C  0  1  N  N  R   1.154   7.015  10.132  -5.233   0.567  -0.430  C11  DD4  10  
DD4  C12  C9   C  0  1  N  N  N   2.506   6.410   9.834  -5.192  -0.315   0.836  C12  DD4  11  
DD4  F    F1   F  0  1  N  N  N  -4.442  -1.142  10.928   5.089  -1.653  -0.352  F    DD4  12  
DD4  C1   C10  C  0  1  Y  N  N  -5.347   0.997  11.058   4.657   0.660  -0.073  C1   DD4  13  
DD4  C    C11  C  0  1  N  N  N  -6.734   0.469  11.319   6.134   0.952  -0.147  C    DD4  14  
DD4  C3   C12  C  0  1  Y  N  N  -3.862   2.884  10.738   2.404   1.434   0.169  C3   DD4  15  
DD4  C2   C13  C  0  1  Y  N  N  -5.122   2.368  10.971   3.757   1.696   0.102  C2   DD4  16  
DD4  O    O1   O  0  1  Y  N  N   0.617   2.741   9.710  -1.280  -1.232   0.157  O    DD4  17  
DD4  N    N3   N  0  1  Y  N  N  -1.270   3.882   9.772  -0.501   0.744   0.305  N    DD4  18  
DD4  O1   O2   O  0  1  N  N  N   0.813   6.492  11.415  -6.056  -0.028  -1.435  O1   DD4  19  
DD4  H1   H1   H  0  1  N  N  N  -2.131  -0.016  10.621   2.499  -1.935  -0.200  H1   DD4  20  
DD4  H2   H2   H  0  1  N  N  N   2.298   4.368  10.089  -3.415  -1.205   1.391  H2   DD4  21  
DD4  H4   H4   H  0  1  N  N  N   0.801   4.814   7.738  -2.972   1.613   0.885  H4   DD4  22  
DD4  H5   H5   H  0  1  N  N  N   0.290   6.996   8.150  -3.533   1.502  -1.451  H5   DD4  23  
DD4  H6   H6   H  0  1  N  N  N  -0.787   6.360   9.439  -3.500  -0.294  -1.460  H6   DD4  24  
DD4  H7   H7   H  0  1  N  N  N   1.166   8.114  10.087  -5.583   1.571  -0.192  H7   DD4  25  
DD4  H8   H8   H  0  1  N  N  N   3.123   6.371  10.744  -5.466  -1.340   0.582  H8   DD4  26  
DD4  H9   H9   H  0  1  N  N  N   3.030   6.991   9.061  -5.878   0.079   1.585  H9   DD4  27  
DD4  H10  H10  H  0  1  N  N  N  -6.895   0.381  12.404   6.417   1.132  -1.183  H10  DD4  28  
DD4  H11  H11  H  0  1  N  N  N  -7.476   1.161  10.893   6.359   1.836   0.451  H11  DD4  29  
DD4  H12  H12  H  0  1  N  N  N  -6.844  -0.520  10.851   6.692   0.100   0.240  H12  DD4  30  
DD4  H13  H13  H  0  1  N  N  N  -3.726   3.953  10.666   1.703   2.244   0.305  H13  DD4  31  
DD4  H14  H14  H  0  1  N  N  N  -5.954   3.046  11.089   4.115   2.711   0.186  H14  DD4  32  
DD4  H15  H15  H  0  1  N  N  N   1.379   6.876  12.074  -6.994  -0.071  -1.201  H15  DD4  33  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DD4  C9   C10  SING  N  N   1  
DD4  C9   N2   SING  N  N   2  
DD4  C9   C8   SING  N  N   3  
DD4  C10  C11  SING  N  N   4  
DD4  N2   C12  SING  N  N   5  
DD4  C8   O    SING  Y  N   6  
DD4  C8   N    DOUB  Y  N   7  
DD4  O    N1   SING  Y  N   8  
DD4  N    C7   SING  Y  N   9  
DD4  C12  C11  SING  N  N  10  
DD4  C11  O1   SING  N  N  11  
DD4  N1   C7   DOUB  Y  N  12  
DD4  C7   C4   SING  N  N  13  
DD4  C4   C5   DOUB  Y  N  14  
DD4  C4   C3   SING  Y  N  15  
DD4  C5   C6   SING  Y  N  16  
DD4  C3   C2   DOUB  Y  N  17  
DD4  C6   F    SING  N  N  18  
DD4  C6   C1   DOUB  Y  N  19  
DD4  C2   C1   SING  Y  N  20  
DD4  C1   C    SING  N  N  21  
DD4  C5   H1   SING  N  N  22  
DD4  N2   H2   SING  N  N  23  
DD4  C9   H4   SING  N  N  24  
DD4  C10  H5   SING  N  N  25  
DD4  C10  H6   SING  N  N  26  
DD4  C11  H7   SING  N  N  27  
DD4  C12  H8   SING  N  N  28  
DD4  C12  H9   SING  N  N  29  
DD4  C    H10  SING  N  N  30  
DD4  C    H11  SING  N  N  31  
DD4  C    H12  SING  N  N  32  
DD4  C3   H13  SING  N  N  33  
DD4  C2   H14  SING  N  N  34  
DD4  O1   H15  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DD4  SMILES            ACDLabs               12.01  "c1(cc(F)c(C)cc1)c2noc(n2)C3NCC(C3)O"  
DD4  InChI             InChI                 1.03   "InChI=1S/C13H14FN3O2/c1-7-2-3-8(4-10(7)14)12-16-13(19-17-12)11-5-9(18)6-15-11/h2-4,9,11,15,18H,5-6H2,1H3/t9-,11-/m1/s1"  
DD4  InChIKey          InChI                 1.03   UGTHZDBHYCLBLY-MWLCHTKSSA-N  
DD4  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccc(cc1F)c2noc(n2)[C@H]3C[C@@H](O)CN3"  
DD4  SMILES            CACTVS                3.385  "Cc1ccc(cc1F)c2noc(n2)[CH]3C[CH](O)CN3"  
DD4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "Cc1ccc(cc1F)c2nc(on2)[C@H]3C[C@H](CN3)O"  
DD4  SMILES            "OpenEye OEToolkits"  2.0.6  "Cc1ccc(cc1F)c2nc(on2)C3CC(CN3)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DD4  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R,5R)-5-[3-(3-fluoro-4-methylphenyl)-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol"  
DD4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{R},5~{R})-5-[3-(3-fluoranyl-4-methyl-phenyl)-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DD4  "Create component"  2017-10-23  RCSB  
DD4  "Initial release"   2020-04-22  RCSB  
##
