data_K84
# 
_chem_comp.id                                    K84 
_chem_comp.name                                  "(9Z)-1-(5-pyridin-2-yl-1,3,4-oxadiazol-2-yl)octadec-9-en-1-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H37 N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-10-20 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        411.580 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     K84 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3K84 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
K84 C21  C21  C 0 1 N N N N N N -45.251 -4.450  -2.279 5.320   3.349  -0.393 C21  K84 1  
K84 C22  C22  C 0 1 N N N N N N -45.528 -4.556  -3.641 6.399   3.066  0.294  C22  K84 2  
K84 C23  C23  C 0 1 N N N N N N -46.511 -5.310  -4.262 6.722   1.634  0.634  C23  K84 3  
K84 C24  C24  C 0 1 N N N N N N -46.086 -5.512  -5.723 8.143   1.308  0.168  C24  K84 4  
K84 C25  C25  C 0 1 N N N N N N -47.112 -6.307  -6.527 8.471   -0.146 0.512  C25  K84 5  
K84 C26  C26  C 0 1 N N N N N N -47.339 -7.677  -5.894 9.891   -0.473 0.046  C26  K84 6  
K84 C27  C27  C 0 1 N N N N N N -48.350 -8.498  -6.694 10.220  -1.927 0.391  C27  K84 7  
K84 C28  C28  C 0 1 N N N N N N -48.594 -9.850  -6.018 11.640  -2.253 -0.075 C28  K84 8  
K84 C29  C29  C 0 1 N N N N N N -47.315 -10.683 -5.884 11.969  -3.707 0.269  C29  K84 9  
K84 C30  C30  C 0 1 N N N N N N -46.690 -10.995 -7.244 13.389  -4.033 -0.197 C30  K84 10 
K84 OAA  OAA  O 0 1 N N N N N N -52.254 1.297   -1.272 -4.440  1.892  0.604  OAA  K84 11 
K84 CAD  CAD  C 0 1 Y N N N N N -46.722 6.741   -3.622 -11.598 -1.326 0.393  CAD  K84 12 
K84 CAG  CAG  C 0 1 Y N N N N N -46.557 5.362   -3.613 -10.891 -2.371 -0.184 CAG  K84 13 
K84 CAH  CAH  C 0 1 Y N N N N N -47.798 7.302   -2.946 -10.922 -0.181 0.781  CAH  K84 14 
K84 CAK  CAK  C 0 1 Y N N N N N -47.476 4.577   -2.926 -9.524  -2.231 -0.352 CAK  K84 15 
K84 NAL  NAL  N 0 1 Y N N N N N -50.446 4.963   -0.775 -6.621  -1.766 -0.635 NAL  K84 16 
K84 CAM  CAM  C 0 1 N N N N N N -48.631 -2.390  -0.300 0.512   2.086  -0.141 CAM  K84 17 
K84 CAN  CAN  C 0 1 N N N N N N -49.915 -2.092  -1.062 -0.507  0.987  -0.452 CAN  K84 18 
K84 CAO  CAO  C 0 1 N N N N N N -47.897 -3.491  -1.088 1.905   1.627  -0.576 CAO  K84 19 
K84 CAP  CAP  C 0 1 N N N N N N -50.821 -0.951  -0.586 -1.900  1.446  -0.018 CAP  K84 20 
K84 CAQ  CAQ  C 0 1 N N N N N N -46.662 -4.012  -0.355 2.924   2.725  -0.265 CAQ  K84 21 
K84 CAR  CAR  C 0 1 N N N N N N -50.146 0.413   -0.738 -2.919  0.347  -0.329 CAR  K84 22 
K84 NAS  NAS  N 0 1 Y N N N N N -48.648 6.534   -2.289 -9.622  -0.073 0.611  NAS  K84 23 
K84 NAT  NAT  N 0 1 Y N N N N N -51.111 4.040   -0.291 -5.427  -1.287 -0.625 NAT  K84 24 
K84 OAU  OAU  O 0 1 Y N N N N N -49.545 3.117   -1.532 -6.725  0.192  0.241  OAU  K84 25 
K84 CAV  CAV  C 0 1 N N N N N N -45.845 -5.039  -1.164 4.317   2.267  -0.700 CAV  K84 26 
K84 CAW  CAW  C 0 1 Y N N N N N -48.535 5.199   -2.273 -8.908  -1.050 0.062  CAW  K84 27 
K84 CAX  CAX  C 0 1 Y N N N N N -49.489 4.475   -1.565 -7.450  -0.884 -0.109 CAX  K84 28 
K84 CAY  CAY  C 0 1 Y N N N N N -50.595 2.885   -0.698 -5.446  -0.082 -0.093 CAY  K84 29 
K84 CAZ  CAZ  C 0 1 N N N N N N -51.159 1.500   -0.391 -4.291  0.799  0.100  CAZ  K84 30 
K84 H21  H21  H 0 1 N N N N N N -44.427 -3.792  -2.045 5.148   4.358  -0.737 H21  K84 31 
K84 H22  H22  H 0 1 N N N N N N -44.895 -3.976  -4.296 7.056   3.859  0.618  H22  K84 32 
K84 H23  H23  H 0 1 N N N N N N -46.615 -6.283  -3.760 6.652   1.491  1.712  H23  K84 33 
K84 H23A H23A H 0 0 N N N N N N -47.476 -4.784  -4.218 6.015   0.973  0.133  H23A K84 34 
K84 H24  H24  H 0 1 N N N N N N -45.967 -4.524  -6.191 8.213   1.450  -0.911 H24  K84 35 
K84 H24A H24A H 0 0 N N N N N N -45.133 -6.061  -5.736 8.850   1.969  0.669  H24A K84 36 
K84 H25  H25  H 0 1 N N N N N N -48.063 -5.755  -6.544 8.401   -0.289 1.591  H25  K84 37 
K84 H25A H25A H 0 0 N N N N N N -46.741 -6.441  -7.554 7.764   -0.807 0.012  H25A K84 38 
K84 H26  H26  H 0 1 N N N N N N -46.382 -8.219  -5.867 9.962   -0.330 -1.032 H26  K84 39 
K84 H26A H26A H 0 0 N N N N N N -47.723 -7.538  -4.873 10.599  0.188  0.547  H26A K84 40 
K84 H27  H27  H 0 1 N N N N N N -49.300 -7.946  -6.750 10.150  -2.069 1.469  H27  K84 41 
K84 H27A H27A H 0 0 N N N N N N -47.957 -8.667  -7.707 9.512   -2.588 -0.110 H27A K84 42 
K84 H28  H28  H 0 1 N N N N N N -48.997 -9.667  -5.011 11.710  -2.110 -1.154 H28  K84 43 
K84 H28A H28A H 0 0 N N N N N N -49.316 -10.417 -6.625 12.348  -1.592 0.426  H28A K84 44 
K84 H29  H29  H 0 1 N N N N N N -46.587 -10.116 -5.284 11.898  -3.850 1.348  H29  K84 45 
K84 H29A H29A H 0 0 N N N N N N -47.564 -11.631 -5.385 11.261  -4.368 -0.231 H29A K84 46 
K84 H30  H30  H 0 1 N N N N N N -45.778 -11.592 -7.100 13.459  -3.891 -1.275 H30  K84 47 
K84 H30A H30A H 0 0 N N N N N N -47.407 -11.562 -7.855 14.097  -3.372 0.304  H30A K84 48 
K84 H30B H30B H 0 0 N N N N N N -46.436 -10.055 -7.755 13.623  -5.069 0.049  H30B K84 49 
K84 HAD  HAD  H 0 1 N N N N N N -46.021 7.371   -4.149 -12.666 -1.403 0.534  HAD  K84 50 
K84 HAG  HAG  H 0 1 N N N N N N -45.727 4.906   -4.132 -11.396 -3.274 -0.494 HAG  K84 51 
K84 HAH  HAH  H 0 1 N N N N N N -47.940 8.373   -2.958 -11.470 0.634  1.230  HAH  K84 52 
K84 HAK  HAK  H 0 1 N N N N N N -47.369 3.503   -2.900 -8.943  -3.025 -0.797 HAK  K84 53 
K84 HAM  HAM  H 0 1 N N N N N N -48.007 -1.487  -0.230 0.243   2.994  -0.681 HAM  K84 54 
K84 HAMA HAMA H 0 0 N N N N N N -48.860 -2.735  0.719  0.513   2.287  0.930  HAMA K84 55 
K84 HAN  HAN  H 0 1 N N N N N N -49.613 -1.840  -2.089 -0.508  0.786  -1.524 HAN  K84 56 
K84 HANA HANA H 0 0 N N N N N N -50.522 -3.008  -1.016 -0.238  0.079  0.087  HANA K84 57 
K84 HAO  HAO  H 0 1 N N N N N N -48.591 -4.331  -1.242 2.174   0.719  -0.036 HAO  K84 58 
K84 HAOA HAOA H 0 0 N N N N N N -47.578 -3.074  -2.055 1.903   1.426  -1.647 HAOA K84 59 
K84 HAP  HAP  H 0 1 N N N N N N -51.742 -0.958  -1.188 -1.899  1.647  1.054  HAP  K84 60 
K84 HAPA HAPA H 0 0 N N N N N N -51.059 -1.110  0.476  -2.169  2.354  -0.558 HAPA K84 61 
K84 HAQ  HAQ  H 0 1 N N N N N N -46.009 -3.154  -0.135 2.655   3.633  -0.805 HAQ  K84 62 
K84 HAQA HAQA H 0 0 N N N N N N -46.996 -4.498  0.573  2.925   2.927  0.806  HAQA K84 63 
K84 HAR  HAR  H 0 1 N N N N N N -49.283 0.478   -0.059 -2.921  0.146  -1.400 HAR  K84 64 
K84 HARA HARA H 0 0 N N N N N N -49.801 0.544   -1.774 -2.650  -0.561 0.211  HARA K84 65 
K84 HAV  HAV  H 0 1 N N N N N N -46.517 -5.841  -1.502 4.315   2.066  -1.771 HAV  K84 66 
K84 HAVA HAVA H 0 0 N N N N N N -45.057 -5.454  -0.519 4.586   1.359  -0.160 HAVA K84 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
K84 C21 CAV  SING N N 1  
K84 C21 H21  SING N N 2  
K84 C22 C21  DOUB N Z 3  
K84 C22 H22  SING N N 4  
K84 C23 C22  SING N N 5  
K84 C23 H23  SING N N 6  
K84 C23 H23A SING N N 7  
K84 C24 C23  SING N N 8  
K84 C24 H24  SING N N 9  
K84 C24 H24A SING N N 10 
K84 C25 C24  SING N N 11 
K84 C25 C26  SING N N 12 
K84 C25 H25  SING N N 13 
K84 C25 H25A SING N N 14 
K84 C26 H26  SING N N 15 
K84 C26 H26A SING N N 16 
K84 C27 C26  SING N N 17 
K84 C27 C28  SING N N 18 
K84 C27 H27  SING N N 19 
K84 C27 H27A SING N N 20 
K84 C28 C29  SING N N 21 
K84 C28 H28  SING N N 22 
K84 C28 H28A SING N N 23 
K84 C29 H29  SING N N 24 
K84 C29 H29A SING N N 25 
K84 C30 C29  SING N N 26 
K84 C30 H30  SING N N 27 
K84 C30 H30A SING N N 28 
K84 C30 H30B SING N N 29 
K84 OAA CAZ  DOUB N N 30 
K84 CAD CAG  DOUB Y N 31 
K84 CAD CAH  SING Y N 32 
K84 CAD HAD  SING N N 33 
K84 CAG CAK  SING Y N 34 
K84 CAG HAG  SING N N 35 
K84 CAH NAS  DOUB Y N 36 
K84 CAH HAH  SING N N 37 
K84 CAK CAW  DOUB Y N 38 
K84 CAK HAK  SING N N 39 
K84 NAL NAT  SING Y N 40 
K84 CAM HAM  SING N N 41 
K84 CAM HAMA SING N N 42 
K84 CAN CAM  SING N N 43 
K84 CAN CAP  SING N N 44 
K84 CAN HAN  SING N N 45 
K84 CAN HANA SING N N 46 
K84 CAO CAM  SING N N 47 
K84 CAO CAQ  SING N N 48 
K84 CAO HAO  SING N N 49 
K84 CAO HAOA SING N N 50 
K84 CAP HAP  SING N N 51 
K84 CAP HAPA SING N N 52 
K84 CAQ HAQ  SING N N 53 
K84 CAQ HAQA SING N N 54 
K84 CAR CAP  SING N N 55 
K84 CAR CAZ  SING N N 56 
K84 CAR HAR  SING N N 57 
K84 CAR HARA SING N N 58 
K84 NAS CAW  SING Y N 59 
K84 OAU CAY  SING Y N 60 
K84 CAV CAQ  SING N N 61 
K84 CAV HAV  SING N N 62 
K84 CAV HAVA SING N N 63 
K84 CAW CAX  SING Y N 64 
K84 CAX NAL  DOUB Y N 65 
K84 CAX OAU  SING Y N 66 
K84 CAY NAT  DOUB Y N 67 
K84 CAY CAZ  SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
K84 SMILES           ACDLabs              11.02 "O=C(c1nnc(o1)c2ncccc2)CCCCCCC\C=C/CCCCCCCC"                                                                                                            
K84 SMILES_CANONICAL CACTVS               3.352 "CCCCCCCC\C=C/CCCCCCCC(=O)c1oc(nn1)c2ccccn2"                                                                                                            
K84 SMILES           CACTVS               3.352 "CCCCCCCCC=CCCCCCCCC(=O)c1oc(nn1)c2ccccn2"                                                                                                              
K84 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCCCCCCC/C=C\CCCCCCCC(=O)c1nnc(o1)c2ccccn2"                                                                                                            
K84 SMILES           "OpenEye OEToolkits" 1.7.0 "CCCCCCCCC=CCCCCCCCC(=O)c1nnc(o1)c2ccccn2"                                                                                                              
K84 InChI            InChI                1.03  "InChI=1S/C25H37N3O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-20-23(29)25-28-27-24(30-25)22-19-17-18-21-26-22/h9-10,17-19,21H,2-8,11-16,20H2,1H3/b10-9-" 
K84 InChIKey         InChI                1.03  SUSLQAWJWPTQHX-KTKRTIGZSA-N                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
K84 "SYSTEMATIC NAME" ACDLabs              11.02 "(9Z)-1-[5-(pyridin-2-yl)-1,3,4-oxadiazol-2-yl]octadec-9-en-1-one" 
K84 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(Z)-1-(5-pyridin-2-yl-1,3,4-oxadiazol-2-yl)octadec-9-en-1-one"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
K84 "Create component"     2009-10-20 RCSB 
K84 "Modify aromatic_flag" 2011-06-04 RCSB 
K84 "Modify descriptor"    2011-06-04 RCSB 
K84 "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            K84 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CAZ 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
