data_NB4
#

_chem_comp.id                                   NB4
_chem_comp.name                                 "(2R)-2-(cyclopentylmethyl)-N'-{5-fluoro-6-[(9aS)-hexahydropyrazino[2,1-c][1,4]oxazin-8(1H)-yl]-2-methylpyrimidin-4-yl}-3-[hydroxy(hydroxymethyl)amino]propanehydrazide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H36 F N7 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-10
_chem_comp.pdbx_modified_date                   2019-06-21
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       481.564
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NB4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OW2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NB4  C11  C1   C  0  1  N  N  N  27.457  -3.448   6.519  -4.589   0.709  -1.006  C11  NB4   1  
NB4  C12  C2   C  0  1  N  N  N  26.519  -3.980   7.602  -4.432   1.702   0.147  C12  NB4   2  
NB4  C13  C3   C  0  1  N  N  N  27.106  -5.174   8.368  -4.443   3.142  -0.392  C13  NB4   3  
NB4  C14  C4   C  0  1  N  N  N  26.455  -5.145   9.745  -5.647   3.850   0.264  C14  NB4   4  
NB4  C01  C5   C  0  1  N  N  N  22.705  -6.496   8.361   1.620   0.472  -3.784  C01  NB4   5  
NB4  C02  C6   C  0  1  Y  N  N  22.773  -6.571   6.878   1.671   0.089  -2.327  C02  NB4   6  
NB4  C04  C7   C  0  1  Y  N  N  24.035  -6.782   4.991   0.544  -0.458  -0.394  C04  NB4   7  
NB4  C07  C8   C  0  1  N  N  N  26.525  -4.974   4.823  -3.030  -0.749   0.257  C07  NB4   8  
NB4  C09  C9   C  0  1  N  N  R  27.801  -4.424   5.389  -4.335  -0.711  -0.495  C09  NB4   9  
NB4  C15  C10  C  0  1  N  N  N  25.945  -3.758   9.982  -5.902   3.041   1.560  C15  NB4  10  
NB4  C16  C11  C  0  1  N  N  N  26.254  -2.944   8.701  -5.629   1.584   1.113  C16  NB4  11  
NB4  C17  C12  C  0  1  N  N  N  28.587  -3.783   4.252  -5.474  -1.128   0.439  C17  NB4  12  
NB4  C20  C13  C  0  1  N  N  N  29.973  -1.963   4.987  -7.699  -2.082   0.409  C20  NB4  13  
NB4  C22  C14  C  0  1  Y  N  N  22.895  -6.734   4.240   1.762  -0.594   0.268  C22  NB4  14  
NB4  C24  C15  C  0  1  Y  N  N  21.654  -6.617   4.881   2.932  -0.370  -0.454  C24  NB4  15  
NB4  C27  C16  C  0  1  N  N  N  19.229  -6.162   4.891   4.267   0.386   1.334  C27  NB4  16  
NB4  C28  C17  C  0  1  N  N  N  18.361  -5.349   3.955   5.613   0.161   2.026  C28  NB4  17  
NB4  C30  C18  C  0  1  N  N  N  17.198  -5.371   1.848   8.010   0.290   1.734  C30  NB4  18  
NB4  C31  C19  C  0  1  N  N  N  16.979  -6.152   0.582   9.120   0.631   0.736  C31  NB4  19  
NB4  C33  C20  C  0  1  N  N  N  19.052  -7.176   0.755   7.734  -0.089  -1.079  C33  NB4  20  
NB4  C34  C21  C  0  1  N  N  S  19.347  -6.439   2.046   6.607  -0.434  -0.101  C34  NB4  21  
NB4  C36  C22  C  0  1  N  N  N  20.211  -7.283   2.959   5.258  -0.212  -0.790  C36  NB4  22  
NB4  F23  F1   F  0  1  N  N  N  23.004  -6.802   2.900   1.808  -0.937   1.574  F23  NB4  23  
NB4  N03  N1   N  0  1  Y  N  N  23.984  -6.696   6.331   0.542  -0.119  -1.681  N03  NB4  24  
NB4  N05  N2   N  0  1  N  N  N  25.236  -6.909   4.435  -0.650  -0.676   0.279  N05  NB4  25  
NB4  N06  N3   N  0  1  N  N  N  26.360  -6.295   4.947  -1.870  -0.538  -0.397  N06  NB4  26  
NB4  N18  N4   N  0  1  N  N  N  29.847  -3.258   4.697  -6.709  -1.296  -0.339  N18  NB4  27  
NB4  N25  N5   N  0  1  Y  N  N  21.616  -6.522   6.216   2.844  -0.033  -1.739  N25  NB4  28  
NB4  N26  N6   N  0  1  N  N  N  20.458  -6.557   4.210   4.172  -0.492   0.159  N26  NB4  29  
NB4  N29  N7   N  0  1  N  N  N  18.083  -6.129   2.742   6.703   0.438   1.079  N29  NB4  30  
NB4  O08  O1   O  0  1  N  N  N  25.683  -4.250   4.300  -3.023  -0.969   1.449  O08  NB4  31  
NB4  O19  O2   O  0  1  N  N  N  30.956  -4.087   4.853  -7.259   0.001  -0.734  O19  NB4  32  
NB4  O21  O3   O  0  1  N  N  N  30.993  -1.443   5.382  -7.261  -3.439   0.496  O21  NB4  33  
NB4  O32  O4   O  0  1  N  N  N  18.207  -6.402  -0.089   8.994  -0.212  -0.413  O32  NB4  34  
NB4  H43  H1   H  0  1  N  N  N  28.398  -3.151   7.005  -5.600   0.775  -1.408  H43  NB4  35  
NB4  H42  H2   H  0  1  N  N  N  26.983  -2.564   6.067  -3.871   0.946  -1.790  H42  NB4  36  
NB4  H44  H3   H  0  1  N  N  N  25.564  -4.277   7.144  -3.501   1.510   0.681  H44  NB4  37  
NB4  H46  H4   H  0  1  N  N  N  26.867  -6.115   7.851  -3.518   3.650  -0.120  H46  NB4  38  
NB4  H45  H5   H  0  1  N  N  N  28.198  -5.072   8.458  -4.560   3.134  -1.476  H45  NB4  39  
NB4  H48  H6   H  0  1  N  N  N  25.621  -5.861   9.779  -5.398   4.884   0.502  H48  NB4  40  
NB4  H47  H7   H  0  1  N  N  N  27.196  -5.408  10.515  -6.517   3.807  -0.390  H47  NB4  41  
NB4  H39  H8   H  0  1  N  N  N  21.655  -6.408   8.676   1.576   1.558  -3.873  H39  NB4  42  
NB4  H38  H9   H  0  1  N  N  N  23.143  -7.407   8.795   2.513   0.103  -4.288  H38  NB4  43  
NB4  H37  H10  H  0  1  N  N  N  23.267  -5.617   8.710   0.735   0.034  -4.244  H37  NB4  44  
NB4  H10  H11  H  0  1  N  N  N  28.394  -5.251   5.807  -4.288  -1.398  -1.340  H10  NB4  45  
NB4  H49  H12  H  0  1  N  N  N  26.454  -3.310  10.848  -5.207   3.341   2.345  H49  NB4  46  
NB4  H50  H13  H  0  1  N  N  N  24.861  -3.779  10.165  -6.933   3.160   1.893  H50  NB4  47  
NB4  H51  H14  H  0  1  N  N  N  27.141  -2.312   8.853  -6.498   1.175   0.596  H51  NB4  48  
NB4  H52  H15  H  0  1  N  N  N  25.395  -2.312   8.432  -5.368   0.964   1.971  H52  NB4  49  
NB4  H53  H16  H  0  1  N  N  N  27.991  -2.962   3.827  -5.219  -2.070   0.924  H53  NB4  50  
NB4  H54  H17  H  0  1  N  N  N  28.772  -4.541   3.477  -5.623  -0.358   1.196  H54  NB4  51  
NB4  H1   H18  H  0  1  N  N  N  29.706  -1.427   4.065  -7.808  -1.670   1.412  H1   NB4  52  
NB4  H57  H19  H  0  1  N  N  N  19.480  -5.556   5.774   3.458   0.154   2.027  H57  NB4  53  
NB4  H58  H20  H  0  1  N  N  N  18.681  -7.062   5.207   4.189   1.426   1.018  H58  NB4  54  
NB4  H59  H21  H  0  1  N  N  N  18.885  -4.421   3.682   5.698   0.830   2.882  H59  NB4  55  
NB4  H60  H22  H  0  1  N  N  N  17.414  -5.101   4.456   5.680  -0.873   2.364  H60  NB4  56  
NB4  H61  H23  H  0  1  N  N  N  17.662  -4.403   1.607   8.132  -0.738   2.076  H61  NB4  57  
NB4  H62  H24  H  0  1  N  N  N  16.232  -5.201   2.346   8.068   0.965   2.588  H62  NB4  58  
NB4  H63  H25  H  0  1  N  N  N  16.317  -5.578  -0.083   9.030   1.674   0.434  H63  NB4  59  
NB4  H64  H26  H  0  1  N  N  N  16.505  -7.113   0.831  10.092   0.469   1.203  H64  NB4  60  
NB4  H66  H27  H  0  1  N  N  N  18.553  -8.128   0.989   7.703  -0.775  -1.926  H66  NB4  61  
NB4  H65  H28  H  0  1  N  N  N  19.998  -7.377   0.231   7.609   0.933  -1.434  H65  NB4  62  
NB4  H35  H29  H  0  1  N  N  N  19.878  -5.504   1.812   6.698  -1.475   0.207  H35  NB4  63  
NB4  H68  H30  H  0  1  N  N  N  19.695  -8.229   3.180   5.188   0.822  -1.129  H68  NB4  64  
NB4  H67  H31  H  0  1  N  N  N  21.170  -7.495   2.463   5.173  -0.881  -1.647  H67  NB4  65  
NB4  H40  H32  H  0  1  N  N  N  25.143  -6.579   3.496  -0.641  -0.923   1.217  H40  NB4  66  
NB4  H41  H33  H  0  1  N  N  N  27.056  -6.841   5.414  -1.880  -0.290  -1.334  H41  NB4  67  
NB4  H3   H35  H  0  1  N  N  N  31.697  -3.573   5.152  -8.075  -0.059  -1.250  H3   NB4  68  
NB4  H4   H37  H  0  1  N  N  N  29.219  -1.759   5.761  -8.658  -2.042  -0.106  H4   NB4  69  
NB4  H2   H36  H  0  1  N  N  N  30.843  -0.515   5.521  -7.868  -4.018   0.978  H2   NB4  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NB4  O32  C31  SING  N  N   1  
NB4  O32  C33  SING  N  N   2  
NB4  C31  C30  SING  N  N   3  
NB4  C33  C34  SING  N  N   4  
NB4  C30  N29  SING  N  N   5  
NB4  C34  N29  SING  N  N   6  
NB4  C34  C36  SING  N  N   7  
NB4  N29  C28  SING  N  N   8  
NB4  F23  C22  SING  N  N   9  
NB4  C36  N26  SING  N  N  10  
NB4  C28  C27  SING  N  N  11  
NB4  N26  C24  SING  N  N  12  
NB4  N26  C27  SING  N  N  13  
NB4  C22  C24  DOUB  Y  N  14  
NB4  C22  C04  SING  Y  N  15  
NB4  C17  N18  SING  N  N  16  
NB4  C17  C09  SING  N  N  17  
NB4  O08  C07  DOUB  N  N  18  
NB4  N05  N06  SING  N  N  19  
NB4  N05  C04  SING  N  N  20  
NB4  N18  O19  SING  N  N  21  
NB4  N18  C20  SING  N  N  22  
NB4  C07  N06  SING  N  N  23  
NB4  C07  C09  SING  N  N  24  
NB4  C24  N25  SING  Y  N  25  
NB4  C20  O21  SING  N  N  26  
NB4  C04  N03  DOUB  Y  N  27  
NB4  C09  C11  SING  N  N  28  
NB4  N25  C02  DOUB  Y  N  29  
NB4  N03  C02  SING  Y  N  30  
NB4  C11  C12  SING  N  N  31  
NB4  C02  C01  SING  N  N  32  
NB4  C12  C13  SING  N  N  33  
NB4  C12  C16  SING  N  N  34  
NB4  C13  C14  SING  N  N  35  
NB4  C16  C15  SING  N  N  36  
NB4  C14  C15  SING  N  N  37  
NB4  C11  H43  SING  N  N  38  
NB4  C11  H42  SING  N  N  39  
NB4  C12  H44  SING  N  N  40  
NB4  C13  H46  SING  N  N  41  
NB4  C13  H45  SING  N  N  42  
NB4  C14  H48  SING  N  N  43  
NB4  C14  H47  SING  N  N  44  
NB4  C01  H39  SING  N  N  45  
NB4  C01  H38  SING  N  N  46  
NB4  C01  H37  SING  N  N  47  
NB4  C09  H10  SING  N  N  48  
NB4  C15  H49  SING  N  N  49  
NB4  C15  H50  SING  N  N  50  
NB4  C16  H51  SING  N  N  51  
NB4  C16  H52  SING  N  N  52  
NB4  C17  H53  SING  N  N  53  
NB4  C17  H54  SING  N  N  54  
NB4  C20  H1   SING  N  N  55  
NB4  C27  H57  SING  N  N  56  
NB4  C27  H58  SING  N  N  57  
NB4  C28  H59  SING  N  N  58  
NB4  C28  H60  SING  N  N  59  
NB4  C30  H61  SING  N  N  60  
NB4  C30  H62  SING  N  N  61  
NB4  C31  H63  SING  N  N  62  
NB4  C31  H64  SING  N  N  63  
NB4  C33  H66  SING  N  N  64  
NB4  C33  H65  SING  N  N  65  
NB4  C34  H35  SING  N  N  66  
NB4  C36  H68  SING  N  N  67  
NB4  C36  H67  SING  N  N  68  
NB4  N05  H40  SING  N  N  69  
NB4  N06  H41  SING  N  N  70  
NB4  O19  H3   SING  N  N  71  
NB4  C20  H4   SING  N  N  72  
NB4  O21  H2   SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NB4  SMILES            ACDLabs               12.01  "C(C1CCCC1)C(C(NNc2nc(C)nc(c2F)N4CCN3CCOCC3C4)=O)CN(CO)O"  
NB4  InChI             InChI                 1.03   "InChI=1S/C22H36FN7O4/c1-15-24-20(19(23)21(25-15)29-7-6-28-8-9-34-13-18(28)12-29)26-27-22(32)17(11-30(33)14-31)10-16-4-2-3-5-16/h16-18,31,33H,2-14H2,1H3,(H,27,32)(H,24,25,26)/t17-,18+/m1/s1"  
NB4  InChIKey          InChI                 1.03   ZUQCOBLJLUYLKK-MSOLQXFVSA-N  
NB4  SMILES_CANONICAL  CACTVS                3.385  "Cc1nc(NNC(=O)[C@H](CC2CCCC2)CN(O)CO)c(F)c(n1)N3CCN4CCOC[C@@H]4C3"  
NB4  SMILES            CACTVS                3.385  "Cc1nc(NNC(=O)[CH](CC2CCCC2)CN(O)CO)c(F)c(n1)N3CCN4CCOC[CH]4C3"  
NB4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1nc(c(c(n1)N2CCN3CCOC[C@@H]3C2)F)NNC(=O)[C@H](CC4CCCC4)CN(CO)O"  
NB4  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1nc(c(c(n1)N2CCN3CCOCC3C2)F)NNC(=O)C(CC4CCCC4)CN(CO)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NB4  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R)-2-(cyclopentylmethyl)-N'-{5-fluoro-6-[(9aS)-hexahydropyrazino[2,1-c][1,4]oxazin-8(1H)-yl]-2-methylpyrimidin-4-yl}-3-[hydroxy(hydroxymethyl)amino]propanehydrazide"  
NB4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R})-~{N}'-[6-[(9~{a}~{S})-3,4,6,7,9,9~{a}-hexahydro-1~{H}-pyrazino[2,1-c][1,4]oxazin-8-yl]-5-fluoranyl-2-methyl-pyrimidin-4-yl]-2-(cyclopentylmethyl)-3-[hydroxymethyl(oxidanyl)amino]propanehydrazide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NB4  "Create component"  2019-05-10  RCSB  
NB4  "Initial release"   2019-06-26  RCSB  
##
