data_ZR4
#

_chem_comp.id                                   ZR4
_chem_comp.name                                 "7-[(5R)-5-C-(4-chloro-3-fluorophenyl)-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H16 Cl F N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-05-21
_chem_comp.pdbx_modified_date                   2021-11-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       394.785
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ZR4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7MXG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZR4  C17  C1   C   0  1  Y  N  N  -26.119  -29.785  -38.357   3.873  -1.143   0.474  C17  ZR4   1  
ZR4  C16  C2   C   0  1  Y  N  N  -24.852  -29.234  -38.365   4.791  -0.201   0.902  C16  ZR4   2  
ZR4  C5   C3   C   0  1  Y  N  N  -34.123  -31.289  -40.175  -2.768   2.086  -1.087  C5   ZR4   3  
ZR4  C13  C4   C   0  1  Y  N  N  -27.091  -27.602  -38.371   2.828   0.503  -0.917  C13  ZR4   4  
ZR4  C6   C5   C   0  1  Y  N  N  -32.933  -30.655  -40.249  -1.767   1.208  -0.907  C6   ZR4   5  
ZR4  C3   C6   C   0  1  Y  N  N  -32.973  -34.609  -42.216  -5.522   0.251   1.349  C3   ZR4   6  
ZR4  C1   C7   C   0  1  Y  N  N  -33.962  -32.551  -40.829  -3.892   1.616  -0.281  C1   ZR4   7  
ZR4  C12  C8   C   0  1  Y  N  N  -27.249  -28.985  -38.368   2.894  -0.791  -0.437  C12  ZR4   8  
ZR4  C14  C9   C   0  1  Y  N  N  -25.824  -27.066  -38.390   3.743   1.448  -0.486  C14  ZR4   9  
ZR4  C15  C10  C   0  1  Y  N  N  -24.702  -27.866  -38.365   4.727   1.094   0.423  C15  ZR4  10  
ZR4  C2   C11  C   0  1  Y  N  N  -32.641  -32.606  -41.300  -3.459   0.433   0.346  C2   ZR4  11  
ZR4  C4   C12  C   0  1  Y  N  N  -34.766  -33.679  -41.103  -5.197   2.070  -0.032  C4   ZR4  12  
ZR4  C9   C13  C   0  1  N  N  S  -28.942  -29.388  -41.058  -0.286  -2.949  -0.383  C9   ZR4  13  
ZR4  C10  C14  C   0  1  N  N  R  -30.352  -29.669  -41.608  -1.606  -2.154  -0.528  C10  ZR4  14  
ZR4  C8   C15  C   0  1  N  N  R  -28.821  -30.301  -39.829   0.738  -1.899   0.089  C8   ZR4  15  
ZR4  C7   C16  C   0  1  N  N  R  -30.599  -31.089  -41.099  -1.340  -0.918   0.369  C7   ZR4  16  
ZR4  C11  C17  C   0  1  N  N  R  -28.629  -29.603  -38.481   1.898  -1.821  -0.906  C11  ZR4  17  
ZR4  N1   N1   N   0  1  Y  N  N  -32.106  -33.617  -42.006  -4.307  -0.210   1.148  N1   ZR4  18  
ZR4  N2   N2   N   0  1  Y  N  N  -34.246  -34.700  -41.820  -5.967   1.360   0.786  N2   ZR4  19  
ZR4  N3   N3   N   0  1  Y  N  N  -32.011  -31.439  -40.930  -2.170   0.214  -0.053  N3   ZR4  20  
ZR4  N4   N4   N   0  1  N  N  N  -36.015  -33.794  -40.643  -5.669   3.228  -0.624  N4   ZR4  21  
ZR4  O1   O1   O   0  1  N  N  N  -30.006  -31.118  -39.815   0.058  -0.634   0.146  O1   ZR4  22  
ZR4  O3   O2   O   0  1  N  N  N  -27.941  -29.612  -42.044  -0.427  -3.984   0.593  O3   ZR4  23  
ZR4  O4   O3   O   0  1  N  N  N  -30.435  -29.532  -43.032  -2.714  -2.911  -0.038  O4   ZR4  24  
ZR4  O2   O4   O   0  1  N  N  N  -29.655  -28.645  -38.230   2.537  -3.096  -0.994  O2   ZR4  25  
ZR4  F1   F1   F   0  1  N  N  N  -25.672  -25.725  -38.500   3.679   2.714  -0.956  F1   ZR4  26  
ZR4  CL1  CL1  CL  0  0  N  N  N  -23.122  -27.157  -38.211   5.879   2.277   0.960  CL1  ZR4  27  
ZR4  H13  H1   H   0  1  N  N  N  -26.230  -30.859  -38.342   3.924  -2.154   0.848  H13  ZR4  28  
ZR4  H12  H2   H   0  1  N  N  N  -23.982  -29.875  -38.371   5.557  -0.478   1.610  H12  ZR4  29  
ZR4  H2   H3   H   0  1  N  N  N  -35.024  -30.915  -39.711  -2.744   2.971  -1.705  H2   ZR4  30  
ZR4  H11  H4   H   0  1  N  N  N  -27.956  -26.955  -38.359   2.063   0.777  -1.628  H11  ZR4  31  
ZR4  H3   H5   H   0  1  N  N  N  -32.728  -29.678  -39.837  -0.792   1.275  -1.366  H3   ZR4  32  
ZR4  H1   H6   H   0  1  N  N  N  -32.596  -35.449  -42.780  -6.182  -0.297   2.006  H1   ZR4  33  
ZR4  H8   H7   H   0  1  N  N  N  -28.905  -28.342  -40.718   0.013  -3.370  -1.343  H8   ZR4  34  
ZR4  H9   H8   H   0  1  N  N  N  -31.064  -28.987  -41.119  -1.768  -1.855  -1.564  H9   ZR4  35  
ZR4  H7   H9   H   0  1  N  N  N  -27.949  -30.952  -39.989   1.113  -2.164   1.077  H7   ZR4  36  
ZR4  H6   H10  H   0  1  N  N  N  -30.109  -31.807  -41.773  -1.524  -1.157   1.416  H6   ZR4  37  
ZR4  H10  H11  H   0  1  N  N  N  -28.695  -30.383  -37.708   1.517  -1.537  -1.887  H10  ZR4  38  
ZR4  H5   H12  H   0  1  N  N  N  -36.393  -34.677  -40.921  -5.096   3.737  -1.219  H5   ZR4  39  
ZR4  H4   H13  H   0  1  N  N  N  -36.009  -33.733  -39.645  -6.572   3.532  -0.444  H4   ZR4  40  
ZR4  H15  H14  H   0  1  N  N  N  -27.085  -29.430  -41.674  -1.060  -4.672   0.348  H15  ZR4  41  
ZR4  H16  H15  H   0  1  N  N  N  -30.271  -28.628  -43.274  -2.920  -3.694  -0.566  H16  ZR4  42  
ZR4  H14  H16  H   0  1  N  N  N  -29.505  -28.233  -37.388   2.901  -3.412  -0.156  H14  ZR4  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZR4  O4   C10  SING  N  N   1  
ZR4  C3   N1   DOUB  Y  N   2  
ZR4  C3   N2   SING  Y  N   3  
ZR4  O3   C9   SING  N  N   4  
ZR4  N1   C2   SING  Y  N   5  
ZR4  N2   C4   DOUB  Y  N   6  
ZR4  C10  C7   SING  N  N   7  
ZR4  C10  C9   SING  N  N   8  
ZR4  C2   N3   SING  Y  N   9  
ZR4  C2   C1   DOUB  Y  N  10  
ZR4  C4   C1   SING  Y  N  11  
ZR4  C4   N4   SING  N  N  12  
ZR4  C7   N3   SING  N  N  13  
ZR4  C7   O1   SING  N  N  14  
ZR4  C9   C8   SING  N  N  15  
ZR4  N3   C6   SING  Y  N  16  
ZR4  C1   C5   SING  Y  N  17  
ZR4  C6   C5   DOUB  Y  N  18  
ZR4  C8   O1   SING  N  N  19  
ZR4  C8   C11  SING  N  N  20  
ZR4  F1   C14  SING  N  N  21  
ZR4  C11  C12  SING  N  N  22  
ZR4  C11  O2   SING  N  N  23  
ZR4  C14  C13  DOUB  Y  N  24  
ZR4  C14  C15  SING  Y  N  25  
ZR4  C13  C12  SING  Y  N  26  
ZR4  C12  C17  DOUB  Y  N  27  
ZR4  C16  C15  DOUB  Y  N  28  
ZR4  C16  C17  SING  Y  N  29  
ZR4  C15  CL1  SING  N  N  30  
ZR4  C17  H13  SING  N  N  31  
ZR4  C16  H12  SING  N  N  32  
ZR4  C5   H2   SING  N  N  33  
ZR4  C13  H11  SING  N  N  34  
ZR4  C6   H3   SING  N  N  35  
ZR4  C3   H1   SING  N  N  36  
ZR4  C9   H8   SING  N  N  37  
ZR4  C10  H9   SING  N  N  38  
ZR4  C8   H7   SING  N  N  39  
ZR4  C7   H6   SING  N  N  40  
ZR4  C11  H10  SING  N  N  41  
ZR4  N4   H5   SING  N  N  42  
ZR4  N4   H4   SING  N  N  43  
ZR4  O3   H15  SING  N  N  44  
ZR4  O4   H16  SING  N  N  45  
ZR4  O2   H14  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZR4  SMILES            ACDLabs               12.01  "Clc1ccc(cc1F)C(O)C1OC(n2ccc3c(N)ncnc32)C(O)C1O"  
ZR4  InChI             InChI                 1.03   "InChI=1S/C17H16ClFN4O4/c18-9-2-1-7(5-10(9)19)11(24)14-12(25)13(26)17(27-14)23-4-3-8-15(20)21-6-22-16(8)23/h1-6,11-14,17,24-26H,(H2,20,21,22)/t11-,12+,13-,14-,17-/m1/s1"  
ZR4  InChIKey          InChI                 1.03   GTCYWLXMJRCJNE-QFRSUPTLSA-N  
ZR4  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2n(ccc12)[C@@H]3O[C@@H]([C@@H](O)[C@H]3O)[C@H](O)c4ccc(Cl)c(F)c4"  
ZR4  SMILES            CACTVS                3.385  "Nc1ncnc2n(ccc12)[CH]3O[CH]([CH](O)[CH]3O)[CH](O)c4ccc(Cl)c(F)c4"  
ZR4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1[C@H]([C@@H]2[C@H]([C@H]([C@@H](O2)n3ccc4c3ncnc4N)O)O)O)F)Cl"  
ZR4  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(cc1C(C2C(C(C(O2)n3ccc4c3ncnc4N)O)O)O)F)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZR4  "SYSTEMATIC NAME"  ACDLabs               12.01  "7-[(5R)-5-C-(4-chloro-3-fluorophenyl)-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine"  
ZR4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R},3~{R},4~{S},5~{R})-2-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-5-[(~{R})-(4-chloranyl-3-fluoranyl-phenyl)-oxidanyl-methyl]oxolane-3,4-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZR4  "Create component"  2021-05-21  RCSB  
ZR4  "Initial release"   2021-11-17  RCSB  
##
