data_YC5
# 
_chem_comp.id                                    YC5 
_chem_comp.name                                  4-azanyl-3-fluoranyl-benzenethiol 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H6 F N S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        143.182 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YC5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PDJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YC5 C1 C1 C 0 1 Y N N N N N -31.250 9.192  6.977 0.705  1.401  0.014  C1 YC5 1  
YC5 C2 C2 C 0 1 Y N N N N N -30.836 7.983  7.510 -0.655 1.640  0.001  C2 YC5 2  
YC5 C3 C3 C 0 1 Y N N N N N -30.917 6.820  6.761 -1.547 0.577  -0.004 C3 YC5 3  
YC5 C4 C4 C 0 1 Y N N N N N -31.425 6.898  5.482 -1.071 -0.730 0.003  C4 YC5 4  
YC5 C5 C5 C 0 1 Y N N N N N -31.816 8.098  4.934 0.291  -0.969 0.016  C5 YC5 5  
YC5 C6 C6 C 0 1 Y N N N N N -31.739 9.270  5.693 1.182  0.097  0.015  C6 YC5 6  
YC5 S1 S1 S 0 1 N N N N N N -32.251 10.832 5.039 2.918  -0.206 0.031  S1 YC5 7  
YC5 F1 F1 F 0 1 N N N N N N -31.459 5.776  4.737 -1.938 -1.766 -0.001 F1 YC5 8  
YC5 N1 N1 N 0 1 N N N N N N -30.548 5.617  7.262 -2.927 0.819  -0.016 N1 YC5 9  
YC5 H1 H1 H 0 1 N N N N N N -31.188 10.087 7.578 1.399  2.229  0.019  H1 YC5 10 
YC5 H2 H2 H 0 1 N N N N N N -30.447 7.946  8.517 -1.026 2.655  -0.004 H2 YC5 11 
YC5 H3 H3 H 0 1 N N N N N N -32.182 8.135  3.919 0.661  -1.983 0.022  H3 YC5 12 
YC5 H4 H4 H 0 1 N N N N N N -32.021 11.632 6.038 3.226  -0.267 -1.277 H4 YC5 13 
YC5 H5 H5 H 0 1 N N N N N N -30.203 5.735  8.193 -3.259 1.731  -0.021 H5 YC5 14 
YC5 H6 H6 H 0 1 N N N N N N -31.338 5.004  7.274 -3.550 0.076  -0.019 H6 YC5 15 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YC5 F1 C4 SING N N 1  
YC5 C5 C4 DOUB Y N 2  
YC5 C5 C6 SING Y N 3  
YC5 S1 C6 SING N N 4  
YC5 C4 C3 SING Y N 5  
YC5 C6 C1 DOUB Y N 6  
YC5 C3 N1 SING N N 7  
YC5 C3 C2 DOUB Y N 8  
YC5 C1 C2 SING Y N 9  
YC5 C1 H1 SING N N 10 
YC5 C2 H2 SING N N 11 
YC5 C5 H3 SING N N 12 
YC5 S1 H4 SING N N 13 
YC5 N1 H5 SING N N 14 
YC5 N1 H6 SING N N 15 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YC5 InChI            InChI                1.06  "InChI=1S/C6H6FNS/c7-5-3-4(9)1-2-6(5)8/h1-3,9H,8H2" 
YC5 InChIKey         InChI                1.06  MAOWDGRYXPTHRM-UHFFFAOYSA-N                         
YC5 SMILES_CANONICAL CACTVS               3.385 "Nc1ccc(S)cc1F"                                     
YC5 SMILES           CACTVS               3.385 "Nc1ccc(S)cc1F"                                     
YC5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1S)F)N"                                   
YC5 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1S)F)N"                                   
# 
_pdbx_chem_comp_identifier.comp_id           YC5 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        4-azanyl-3-fluoranyl-benzenethiol 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YC5 "Create component" 2023-06-13 PDBE 
YC5 "Initial release"  2023-06-28 RCSB 
YC5 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            YC5 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
