data_YR6
# 
_chem_comp.id                                    YR6 
_chem_comp.name                                  "(2Z)-2-cyano-N-[(4P)-4-(3-fluorophenyl)-5-(methanesulfonyl)pyrimidin-2-yl]-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H14 F N5 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-15 
_chem_comp.pdbx_modified_date                    2024-02-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        443.408 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YR6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FUJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YR6 C10 C1  C 0 1 Y N N N N N 14.996 10.797 24.494 -2.591 -1.201 0.192  C10 YR6 1  
YR6 O14 O1  O 0 1 N N N N N N 13.991 11.278 26.847 -3.951 -3.296 0.538  O14 YR6 2  
YR6 C15 C2  C 0 1 Y N N N N N 15.997 10.719 23.475 -2.435 0.186  0.123  C15 YR6 3  
YR6 C16 C3  C 0 1 Y N N N N N 17.422 11.112 23.631 -3.622 1.076  0.090  C16 YR6 4  
YR6 C17 C4  C 0 1 Y N N N N N 18.250 10.466 24.555 -3.783 2.061  1.062  C17 YR6 5  
YR6 C18 C5  C 0 1 Y N N N N N 19.581 10.834 24.693 -4.888 2.888  1.028  C18 YR6 6  
YR6 C19 C6  C 0 1 Y N N N N N 20.139 11.790 23.855 -5.836 2.739  0.032  C19 YR6 7  
YR6 C20 C7  C 0 1 Y N N N N N 19.319 12.372 22.913 -5.681 1.762  -0.938 C20 YR6 8  
YR6 C21 C8  C 0 1 Y N N N N N 17.983 12.073 22.783 -4.576 0.933  -0.916 C21 YR6 9  
YR6 C24 C9  C 0 1 N N N N N N 14.215 8.680  17.996 4.671  -0.541 -0.044 C24 YR6 10 
YR6 C26 C10 C 0 1 Y N N N N N 14.260 8.411  16.590 6.014  0.033  0.107  C26 YR6 11 
YR6 C27 C11 C 0 1 Y N N N N N 15.247 7.863  15.824 7.109  -0.089 -0.735 C27 YR6 12 
YR6 N1  N1  N 0 1 N N N N N N 10.776 8.303  17.714 3.823  2.824  0.207  N1  YR6 13 
YR6 C2  C12 C 0 1 N N N N N N 11.806 8.496  18.159 3.701  1.697  0.146  C2  YR6 14 
YR6 C3  C13 C 0 1 N N N N N N 13.070 8.751  18.762 3.549  0.275  0.070  C3  YR6 15 
YR6 C4  C14 C 0 1 N N N N N N 13.014 9.147  20.160 2.211  -0.321 0.111  C4  YR6 16 
YR6 O5  O2  O 0 1 N N N N N N 11.918 9.181  20.749 2.086  -1.530 0.177  O5  YR6 17 
YR6 N6  N2  N 0 1 N N N N N N 14.193 9.356  20.776 1.120  0.469  0.076  N6  YR6 18 
YR6 C7  C15 C 0 1 Y N N N N N 14.445 9.792  22.055 -0.147 -0.096 0.116  C7  YR6 19 
YR6 N8  N3  N 0 1 Y N N N N N 13.425 9.867  22.923 -0.264 -1.413 0.187  N8  YR6 20 
YR6 C9  C16 C 0 1 Y N N N N N 13.729 10.345 24.133 -1.455 -1.990 0.226  C9  YR6 21 
YR6 S11 S1  S 0 1 N N N N N N 15.216 11.470 26.134 -4.195 -1.928 0.242  S11 YR6 22 
YR6 C12 C17 C 0 1 N N N N N N 16.470 10.550 26.925 -5.018 -1.112 1.638  C12 YR6 23 
YR6 O13 O3  O 0 1 N N N N N N 15.691 12.815 25.963 -4.794 -1.540 -0.987 O13 YR6 24 
YR6 F22 F1  F 0 1 N N N N N N 19.847 13.300 22.078 -6.611 1.621  -1.908 F22 YR6 25 
YR6 N23 N4  N 0 1 Y N N N N N 15.704 10.216 22.263 -1.207 0.696  0.086  N23 YR6 26 
YR6 O25 O4  O 0 1 N N N N N N 15.395 8.940  18.519 4.525  -1.859 -0.294 O25 YR6 27 
YR6 O28 O5  O 0 1 Y N N N N N 14.889 7.908  14.532 8.094  0.612  -0.167 O28 YR6 28 
YR6 N29 N5  N 0 1 Y N N N N N 13.626 8.533  14.426 7.770  1.130  0.872  N29 YR6 29 
YR6 C30 C18 C 0 1 Y N N N N N 13.309 8.849  15.646 6.533  0.887  1.189  C30 YR6 30 
YR6 C31 C19 C 0 1 N N N N N N 16.553 7.230  16.113 7.174  -0.857 -2.031 C31 YR6 31 
YR6 H37 H1  H 0 1 N N N N N N 17.849 9.672  25.168 -3.045 2.178  1.841  H37 YR6 32 
YR6 H38 H2  H 0 1 N N N N N N 20.188 10.373 25.458 -5.013 3.651  1.781  H38 YR6 33 
YR6 H39 H3  H 0 1 N N N N N N 21.179 12.068 23.939 -6.699 3.388  0.010  H39 YR6 34 
YR6 H40 H4  H 0 1 N N N N N N 17.378 12.571 22.040 -4.453 0.174  -1.674 H40 YR6 35 
YR6 H32 H5  H 0 1 N N N N N N 15.004 9.166  20.222 1.220  1.432  0.024  H32 YR6 36 
YR6 H33 H6  H 0 1 N N N N N N 12.946 10.383 24.875 -1.539 -3.066 0.285  H33 YR6 37 
YR6 H35 H7  H 0 1 N N N N N N 16.628 10.943 27.940 -5.063 -0.038 1.455  H35 YR6 38 
YR6 H34 H8  H 0 1 N N N N N N 16.168 9.494  26.983 -6.029 -1.505 1.743  H34 YR6 39 
YR6 H36 H9  H 0 1 N N N N N N 17.404 10.633 26.350 -4.457 -1.302 2.552  H36 YR6 40 
YR6 H41 H10 H 0 1 N N N N N N 16.065 8.843  17.853 3.628  -2.175 -0.468 H41 YR6 41 
YR6 H42 H11 H 0 1 N N N N N N 12.412 9.390  15.909 6.000  1.235  2.062  H42 YR6 42 
YR6 H45 H12 H 0 1 N N N N N N 17.015 6.896  15.172 6.975  -0.182 -2.863 H45 YR6 43 
YR6 H44 H13 H 0 1 N N N N N N 17.213 7.959  16.606 8.167  -1.292 -2.145 H44 YR6 44 
YR6 H43 H14 H 0 1 N N N N N N 16.402 6.365  16.775 6.428  -1.651 -2.020 H43 YR6 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YR6 N1  C2  TRIP N N 1  
YR6 C2  C3  SING N N 2  
YR6 C3  C4  SING N N 3  
YR6 C3  C24 DOUB N Z 4  
YR6 C4  O5  DOUB N N 5  
YR6 C4  N6  SING N N 6  
YR6 N6  C7  SING N N 7  
YR6 C7  N8  DOUB Y N 8  
YR6 C7  N23 SING Y N 9  
YR6 N8  C9  SING Y N 10 
YR6 C9  C10 DOUB Y N 11 
YR6 C10 S11 SING N N 12 
YR6 C10 C15 SING Y N 13 
YR6 S11 C12 SING N N 14 
YR6 S11 O13 DOUB N N 15 
YR6 S11 O14 DOUB N N 16 
YR6 C15 C16 SING N N 17 
YR6 C15 N23 DOUB Y N 18 
YR6 C16 C17 DOUB Y N 19 
YR6 C16 C21 SING Y N 20 
YR6 C17 C18 SING Y N 21 
YR6 C18 C19 DOUB Y N 22 
YR6 C19 C20 SING Y N 23 
YR6 C20 C21 DOUB Y N 24 
YR6 C20 F22 SING N N 25 
YR6 C24 O25 SING N N 26 
YR6 C24 C26 SING N N 27 
YR6 C26 C27 DOUB Y N 28 
YR6 C26 C30 SING Y N 29 
YR6 C27 O28 SING Y N 30 
YR6 C27 C31 SING N N 31 
YR6 O28 N29 SING Y N 32 
YR6 N29 C30 DOUB Y N 33 
YR6 C17 H37 SING N N 34 
YR6 C18 H38 SING N N 35 
YR6 C19 H39 SING N N 36 
YR6 C21 H40 SING N N 37 
YR6 N6  H32 SING N N 38 
YR6 C9  H33 SING N N 39 
YR6 C12 H35 SING N N 40 
YR6 C12 H34 SING N N 41 
YR6 C12 H36 SING N N 42 
YR6 O25 H41 SING N N 43 
YR6 C30 H42 SING N N 44 
YR6 C31 H45 SING N N 45 
YR6 C31 H44 SING N N 46 
YR6 C31 H43 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YR6 SMILES           ACDLabs              12.01 "Cc1oncc1C(/O)=C(\C#N)C(=O)Nc1nc(c2cccc(F)c2)c(cn1)S(C)(=O)=O"                                                                                                   
YR6 InChI            InChI                1.06  "InChI=1S/C19H14FN5O5S/c1-10-14(8-23-30-10)17(26)13(7-21)18(27)25-19-22-9-15(31(2,28)29)16(24-19)11-4-3-5-12(20)6-11/h3-6,8-9,26H,1-2H3,(H,22,24,25,27)/b17-13-" 
YR6 InChIKey         InChI                1.06  KHDIFRJVCJOWNQ-LGMDPLHJSA-N                                                                                                                                      
YR6 SMILES_CANONICAL CACTVS               3.385 "Cc1oncc1\C(O)=C(/C#N)C(=O)Nc2ncc(c(n2)c3cccc(F)c3)[S](C)(=O)=O"                                                                                                 
YR6 SMILES           CACTVS               3.385 "Cc1oncc1C(O)=C(C#N)C(=O)Nc2ncc(c(n2)c3cccc(F)c3)[S](C)(=O)=O"                                                                                                   
YR6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cno1)/C(=C(\C#N)/C(=O)Nc2ncc(c(n2)c3cccc(c3)F)S(=O)(=O)C)/O"                                                                                               
YR6 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(cno1)C(=C(C#N)C(=O)Nc2ncc(c(n2)c3cccc(c3)F)S(=O)(=O)C)O"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YR6 "SYSTEMATIC NAME" ACDLabs              12.01 "(2Z)-2-cyano-N-[(4P)-4-(3-fluorophenyl)-5-(methanesulfonyl)pyrimidin-2-yl]-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide" 
YR6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{Z})-2-cyano-~{N}-[4-(3-fluorophenyl)-5-methylsulfonyl-pyrimidin-2-yl]-3-(5-methyl-1,2-oxazol-4-yl)-3-oxidanyl-prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YR6 "Create component" 2023-02-15 RCSB 
YR6 "Initial release"  2024-02-21 RCSB 
# 
