data_9K7
# 
_chem_comp.id                                    9K7 
_chem_comp.name                                  "2-chloro-N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-N-methylacetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H23 Cl N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-17 
_chem_comp.pdbx_modified_date                    2017-08-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.948 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9K7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VQT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9K7 C26 C1  C  0 1 N N N 844.919 -29.765 146.690 3.946  3.065  -1.520 C26 9K7 1  
9K7 C25 C2  C  0 1 N N N 843.606 -29.421 145.981 3.079  1.926  -1.049 C25 9K7 2  
9K7 C27 C3  C  0 1 N N N 841.583 -30.106 144.798 4.333  1.913  1.040  C27 9K7 3  
9K7 N4  N1  N  0 1 N N N 840.478 -36.038 150.352 4.286  -6.065 -0.616 N4  9K7 4  
9K7 C24 C4  C  0 1 N N N 844.326 -36.044 145.734 -0.045 -2.886 1.981  C24 9K7 5  
9K7 C22 C5  C  0 1 Y N N 841.677 -32.215 147.541 4.037  -1.290 -0.353 C22 9K7 6  
9K7 C21 C6  C  0 1 Y N N 841.132 -33.079 148.509 4.389  -2.579 -0.591 C21 9K7 7  
9K7 N3  N2  N  0 1 N N N 842.838 -30.429 145.488 3.277  1.389  0.172  N3  9K7 8  
9K7 C23 C7  C  0 1 N N N 840.928 -35.326 149.555 3.974  -4.993 -0.408 C23 9K7 9  
9K7 C20 C8  C  0 1 Y N N 841.497 -34.433 148.551 3.581  -3.641 -0.145 C20 9K7 10 
9K7 C1  C9  C  0 1 Y N N 848.471 -33.393 142.096 -2.056 3.085  1.587  C1  9K7 11 
9K7 C2  C10 C  0 1 Y N N 847.127 -33.764 142.355 -1.679 1.758  1.466  C2  9K7 12 
9K7 C7  C11 C  0 1 N N N 846.522 -34.458 140.125 -2.617 1.790  -0.719 C7  9K7 13 
9K7 C6  C12 C  0 1 Y N N 849.361 -33.182 143.167 -1.785 3.777  2.753  C6  9K7 14 
9K7 C5  C13 C  0 1 Y N N 848.911 -33.339 144.493 -1.137 3.148  3.799  C5  9K7 15 
9K7 C4  C14 C  0 1 Y N N 847.574 -33.706 144.753 -0.758 1.823  3.685  C4  9K7 16 
9K7 C3  C15 C  0 1 Y N N 846.682 -33.908 143.678 -1.027 1.123  2.520  C3  9K7 17 
9K7 C8  C16 C  0 1 N N N 845.326 -35.208 139.521 -2.828 0.865  -1.920 C8  9K7 18 
9K7 C9  C17 C  0 1 N N N 845.877 -37.547 139.916 -5.063 -0.068 -1.714 C9  9K7 19 
9K7 C10 C18 C  0 1 N N N 844.670 -38.872 141.618 -5.461 -2.208 -0.866 C10 9K7 20 
9K7 C11 C19 C  0 1 N N N 843.880 -37.682 141.908 -4.068 -2.383 -0.684 C11 9K7 21 
9K7 C12 C20 C  0 1 N N N 844.109 -36.535 141.226 -3.230 -1.382 -1.029 C12 9K7 22 
9K7 C13 C21 C  0 1 Y N N 844.484 -33.728 144.730 0.494  -0.458 1.734  C13 9K7 23 
9K7 O2  O1  O  0 1 N N N 846.155 -33.996 141.409 -1.945 1.075  0.320  O2  9K7 24 
9K7 O1  O2  O  0 1 N N N 845.370 -34.282 143.839 -0.654 -0.179 2.405  O1  9K7 25 
9K7 N1  N3  N  0 1 N N N 845.077 -36.429 140.240 -3.737 -0.221 -1.546 N1  9K7 26 
9K7 C14 C22 C  0 1 Y N N 843.917 -34.575 145.700 0.843  -1.768 1.497  C14 9K7 27 
9K7 N2  N4  N  0 1 N N N 845.630 -38.715 140.624 -5.921 -1.049 -1.378 N2  9K7 28 
9K7 C15 C23 C  0 1 Y N N 842.985 -34.058 146.631 2.029  -2.061 0.802  C15 9K7 29 
9K7 C19 C24 C  0 1 Y N N 842.423 -34.913 147.610 2.408  -3.388 0.547  C19 9K7 30 
9K7 O5  O3  O  0 1 N N N 843.286 -28.237 145.865 2.204  1.492  -1.768 O5  9K7 31 
9K7 C16 C25 C  0 1 Y N N 842.610 -32.683 146.586 2.855  -1.001 0.351  C16 9K7 32 
9K7 C17 C26 C  0 1 Y N N 843.180 -31.823 145.599 2.474  0.333  0.608  C17 9K7 33 
9K7 C18 C27 C  0 1 Y N N 844.103 -32.370 144.675 1.306  0.589  1.292  C18 9K7 34 
9K7 O4  O4  O  0 1 N N N 844.545 -39.957 142.173 -6.236 -3.097 -0.562 O4  9K7 35 
9K7 O3  O5  O  0 1 N N N 846.756 -37.524 139.056 -5.493 0.974  -2.170 O3  9K7 36 
9K7 CL1 CL1 CL 0 0 N N N 844.858 -29.779 148.474 3.440  3.559  -3.178 CL1 9K7 37 
9K7 H1  H1  H  0 1 N N N 845.231 -30.765 146.355 3.836  3.910  -0.840 H1  9K7 38 
9K7 H2  H2  H  0 1 N N N 845.672 -29.024 146.384 4.988  2.746  -1.538 H2  9K7 39 
9K7 H3  H3  H  0 1 N N N 841.443 -29.015 144.783 5.260  1.371  0.853  H3  9K7 40 
9K7 H4  H4  H  0 1 N N N 841.624 -30.485 143.766 4.483  2.973  0.831  H4  9K7 41 
9K7 H5  H5  H  0 1 N N N 840.742 -30.577 145.328 4.043  1.786  2.083  H5  9K7 42 
9K7 H6  H6  H  0 1 N N N 845.198 -36.167 146.393 -0.774 -3.131 1.209  H6  9K7 43 
9K7 H7  H7  H  0 1 N N N 843.490 -36.648 146.116 0.563  -3.764 2.199  H7  9K7 44 
9K7 H8  H8  H  0 1 N N N 844.584 -36.376 144.718 -0.565 -2.570 2.885  H8  9K7 45 
9K7 H9  H9  H  0 1 N N N 841.378 -31.177 147.527 4.667  -0.485 -0.702 H9  9K7 46 
9K7 H10 H10 H  0 1 N N N 840.424 -32.695 149.228 5.301  -2.793 -1.129 H10 9K7 47 
9K7 H11 H11 H  0 1 N N N 848.812 -33.272 141.078 -2.558 3.580  0.769  H11 9K7 48 
9K7 H12 H12 H  0 1 N N N 847.384 -35.137 140.206 -2.013 2.645  -1.021 H12 9K7 49 
9K7 H13 H13 H  0 1 N N N 846.787 -33.604 139.484 -3.583 2.138  -0.354 H13 9K7 50 
9K7 H14 H14 H  0 1 N N N 850.385 -32.901 142.972 -2.080 4.812  2.846  H14 9K7 51 
9K7 H15 H15 H  0 1 N N N 849.593 -33.178 145.315 -0.927 3.692  4.708  H15 9K7 52 
9K7 H16 H16 H  0 1 N N N 847.234 -33.832 145.770 -0.252 1.333  4.504  H16 9K7 53 
9K7 H17 H17 H  0 1 N N N 844.433 -34.568 139.576 -3.260 1.433  -2.744 H17 9K7 54 
9K7 H18 H18 H  0 1 N N N 845.543 -35.446 138.469 -1.870 0.447  -2.229 H18 9K7 55 
9K7 H19 H19 H  0 1 N N N 843.112 -37.715 142.667 -3.680 -3.305 -0.275 H19 9K7 56 
9K7 H20 H20 H  0 1 N N N 843.512 -35.666 141.460 -2.164 -1.497 -0.898 H20 9K7 57 
9K7 H21 H21 H  0 1 N N N 846.191 -39.512 140.400 -6.874 -0.922 -1.505 H21 9K7 58 
9K7 H22 H22 H  0 1 N N N 842.712 -35.953 147.634 1.787  -4.206 0.884  H22 9K7 59 
9K7 H23 H23 H  0 1 N N N 844.525 -31.734 143.911 1.015  1.610  1.488  H23 9K7 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9K7 O3  C9  DOUB N N 1  
9K7 C8  C7  SING N N 2  
9K7 C8  N1  SING N N 3  
9K7 C9  N1  SING N N 4  
9K7 C9  N2  SING N N 5  
9K7 C7  O2  SING N N 6  
9K7 N1  C12 SING N N 7  
9K7 N2  C10 SING N N 8  
9K7 C12 C11 DOUB N N 9  
9K7 O2  C2  SING N N 10 
9K7 C10 C11 SING N N 11 
9K7 C10 O4  DOUB N N 12 
9K7 C1  C2  DOUB Y N 13 
9K7 C1  C6  SING Y N 14 
9K7 C2  C3  SING Y N 15 
9K7 C6  C5  DOUB Y N 16 
9K7 C3  O1  SING N N 17 
9K7 C3  C4  DOUB Y N 18 
9K7 O1  C13 SING N N 19 
9K7 C5  C4  SING Y N 20 
9K7 C18 C13 DOUB Y N 21 
9K7 C18 C17 SING Y N 22 
9K7 C13 C14 SING Y N 23 
9K7 C27 N3  SING N N 24 
9K7 N3  C17 SING N N 25 
9K7 N3  C25 SING N N 26 
9K7 C17 C16 DOUB Y N 27 
9K7 C14 C24 SING N N 28 
9K7 C14 C15 DOUB Y N 29 
9K7 O5  C25 DOUB N N 30 
9K7 C25 C26 SING N N 31 
9K7 C16 C15 SING Y N 32 
9K7 C16 C22 SING Y N 33 
9K7 C15 C19 SING Y N 34 
9K7 C26 CL1 SING N N 35 
9K7 C22 C21 DOUB Y N 36 
9K7 C19 C20 DOUB Y N 37 
9K7 C21 C20 SING Y N 38 
9K7 C20 C23 SING N N 39 
9K7 C23 N4  TRIP N N 40 
9K7 C26 H1  SING N N 41 
9K7 C26 H2  SING N N 42 
9K7 C27 H3  SING N N 43 
9K7 C27 H4  SING N N 44 
9K7 C27 H5  SING N N 45 
9K7 C24 H6  SING N N 46 
9K7 C24 H7  SING N N 47 
9K7 C24 H8  SING N N 48 
9K7 C22 H9  SING N N 49 
9K7 C21 H10 SING N N 50 
9K7 C1  H11 SING N N 51 
9K7 C7  H12 SING N N 52 
9K7 C7  H13 SING N N 53 
9K7 C6  H14 SING N N 54 
9K7 C5  H15 SING N N 55 
9K7 C4  H16 SING N N 56 
9K7 C8  H17 SING N N 57 
9K7 C8  H18 SING N N 58 
9K7 C11 H19 SING N N 59 
9K7 C12 H20 SING N N 60 
9K7 N2  H21 SING N N 61 
9K7 C19 H22 SING N N 62 
9K7 C18 H23 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9K7 SMILES           ACDLabs              12.01 "C(Cl)C(N(C)c3c4ccc(C#N)cc4c(C)c(Oc1c(cccc1)OCCN2C(NC(C=C2)=O)=O)c3)=O"                                                                                                               
9K7 InChI            InChI                1.03  "InChI=1S/C27H23ClN4O5/c1-17-20-13-18(16-29)7-8-19(20)21(31(2)26(34)15-28)14-24(17)37-23-6-4-3-5-22(23)36-12-11-32-10-9-25(33)30-27(32)35/h3-10,13-14H,11-12,15H2,1-2H3,(H,30,33,35)" 
9K7 InChIKey         InChI                1.03  MXVYCFLMSJUAJE-UHFFFAOYSA-N                                                                                                                                                           
9K7 SMILES_CANONICAL CACTVS               3.385 "CN(C(=O)CCl)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N"                                                                                                                     
9K7 SMILES           CACTVS               3.385 "CN(C(=O)CCl)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N"                                                                                                                     
9K7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)CCl)C#N"                                                                                                                       
9K7 SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)CCl)C#N"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9K7 "SYSTEMATIC NAME" ACDLabs              12.01 "2-chloro-N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-N-methylacetamide"          
9K7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[3-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-6-cyano-4-methyl-naphthalen-1-yl]-2-chloranyl-~{N}-methyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9K7 "Create component" 2017-05-17 RCSB 
9K7 "Initial release"  2017-08-23 RCSB 
# 
