data_DY7
# 
_chem_comp.id                                    DY7 
_chem_comp.name                                  "2-amino-4-[(3,5-dibromophenyl)amino]-6-methylpyrimidin-1-ium" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H11 Br2 N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2017-11-14 
_chem_comp.pdbx_modified_date                    2017-12-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        359.040 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DY7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BM7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DY7 C15  C1  C  0 1 Y N N 28.539 10.138 27.019 -4.880 1.331  0.196  C15  DY7 1  
DY7 C11  C2  C  0 1 Y N N 30.044 12.428 20.312 1.007  -1.163 0.256  C11  DY7 2  
DY7 C10  C3  C  0 1 Y N N 30.319 11.222 19.681 2.201  -0.506 0.018  C10  DY7 3  
DY7 C14  C4  C  0 1 Y N N 29.157 10.964 26.165 -3.682 1.855  0.639  C14  DY7 4  
DY7 N17  N1  N  1 1 Y N N 28.343 8.785  26.656 -4.875 0.218  -0.524 N17  DY7 5  
DY7 N01  N2  N  0 1 N N N 28.644 7.138  25.037 -3.775 -1.551 -1.580 N01  DY7 6  
DY7 C02  C5  C  0 1 Y N N 28.839 8.402  25.355 -3.738 -0.392 -0.826 C02  DY7 7  
DY7 N03  N3  N  0 1 Y N N 29.464 9.316  24.539 -2.568 0.081  -0.425 N03  DY7 8  
DY7 C04  C6  C  0 1 Y N N 29.662 10.634 24.879 -2.500 1.190  0.304  C04  DY7 9  
DY7 N05  N4  N  0 1 N N N 30.327 11.539 24.001 -1.273 1.683  0.723  N05  DY7 10 
DY7 C06  C7  C  0 1 Y N N 30.334 11.448 22.533 -0.108 0.948  0.486  C06  DY7 11 
DY7 C07  C8  C  0 1 Y N N 30.612 10.208 21.876 1.092  1.606  0.246  C07  DY7 12 
DY7 C08  C9  C  0 1 Y N N 30.599 10.126 20.483 2.243  0.877  0.013  C08  DY7 13 
DY7 BR9  BR1 BR 0 0 N N N 30.995 8.385  19.654 3.878  1.771  -0.312 BR9  DY7 14 
DY7 BR2  BR2 BR 0 0 N N N 29.635 14.025 19.240 0.956  -3.053 0.269  BR2  DY7 15 
DY7 C13  C10 C  0 1 Y N N 30.045 12.559 21.712 -0.147 -0.440 0.490  C13  DY7 16 
DY7 C16  C11 C  0 1 N N N 27.970 10.402 28.389 -6.181 2.013  0.534  C16  DY7 17 
DY7 H101 H1  H  0 0 N N N 30.315 11.141 18.604 3.102  -1.073 -0.165 H101 DY7 18 
DY7 H141 H2  H  0 0 N N N 29.285 11.987 26.487 -3.659 2.758  1.231  H141 DY7 19 
DY7 H011 H3  H  0 0 N N N 28.959 6.790  24.154 -4.626 -1.908 -1.881 H011 DY7 20 
DY7 H012 H4  H  0 0 N N N 28.181 6.527  25.679 -2.950 -2.008 -1.809 H012 DY7 21 
DY7 H051 H5  H  0 0 N N N 30.829 12.297 24.417 -1.224 2.537  1.179  H051 DY7 22 
DY7 H071 H6  H  0 0 N N N 30.834 9.329  22.463 1.126  2.685  0.243  H071 DY7 23 
DY7 H131 H7  H  0 0 N N N 29.823 13.516 22.162 -1.079 -0.954 0.675  H131 DY7 24 
DY7 H162 H8  H  0 0 N N N 26.919 10.712 28.296 -6.423 2.738  -0.243 H162 DY7 25 
DY7 H161 H9  H  0 0 N N N 28.030 9.485  28.994 -6.976 1.270  0.597  H161 DY7 26 
DY7 H163 H10 H  0 0 N N N 28.546 11.202 28.877 -6.085 2.524  1.492  H163 DY7 27 
DY7 H171 H11 H  0 0 N N N 27.889 8.133  27.263 -5.715 -0.155 -0.833 H171 DY7 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DY7 BR2 C11  SING N N 1  
DY7 BR9 C08  SING N N 2  
DY7 C10 C11  DOUB Y N 3  
DY7 C10 C08  SING Y N 4  
DY7 C11 C13  SING Y N 5  
DY7 C08 C07  DOUB Y N 6  
DY7 C13 C06  DOUB Y N 7  
DY7 C07 C06  SING Y N 8  
DY7 C06 N05  SING N N 9  
DY7 N05 C04  SING N N 10 
DY7 N03 C04  DOUB Y N 11 
DY7 N03 C02  SING Y N 12 
DY7 C04 C14  SING Y N 13 
DY7 N01 C02  SING N N 14 
DY7 C02 N17  DOUB Y N 15 
DY7 C14 C15  DOUB Y N 16 
DY7 N17 C15  SING Y N 17 
DY7 C15 C16  SING N N 18 
DY7 C10 H101 SING N N 19 
DY7 C14 H141 SING N N 20 
DY7 N01 H011 SING N N 21 
DY7 N01 H012 SING N N 22 
DY7 N05 H051 SING N N 23 
DY7 C07 H071 SING N N 24 
DY7 C13 H131 SING N N 25 
DY7 C16 H162 SING N N 26 
DY7 C16 H161 SING N N 27 
DY7 C16 H163 SING N N 28 
DY7 N17 H171 SING N N 29 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DY7 SMILES           ACDLabs              12.01 "c1(C)cc(nc([nH+]1)N)Nc2cc(cc(c2)Br)Br"                                                              
DY7 InChI            InChI                1.03  "InChI=1S/C11H10Br2N4/c1-6-2-10(17-11(14)15-6)16-9-4-7(12)3-8(13)5-9/h2-5H,1H3,(H3,14,15,16,17)/p+1" 
DY7 InChIKey         InChI                1.03  KGGBAZUXVZBIGO-UHFFFAOYSA-O                                                                          
DY7 SMILES_CANONICAL CACTVS               3.385 "Cc1cc(Nc2cc(Br)cc(Br)c2)nc(N)[nH+]1"                                                                
DY7 SMILES           CACTVS               3.385 "Cc1cc(Nc2cc(Br)cc(Br)c2)nc(N)[nH+]1"                                                                
DY7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(nc([nH+]1)N)Nc2cc(cc(c2)Br)Br"                                                                
DY7 SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(nc([nH+]1)N)Nc2cc(cc(c2)Br)Br"                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DY7 "SYSTEMATIC NAME" ACDLabs              12.01 "2-amino-4-[(3,5-dibromophenyl)amino]-6-methylpyrimidin-1-ium"         
DY7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}4-[3,5-bis(bromanyl)phenyl]-6-methyl-pyrimidin-1-ium-2,4-diamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DY7 "Create component" 2017-11-14 RCSB 
DY7 "Initial release"  2018-01-03 RCSB 
# 
