data_Y97
#

_chem_comp.id                                   Y97
_chem_comp.name                                 "5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3-[5-[[[(3~{R})-oxolan-3-yl]amino]methyl]thiophen-2-yl]phenyl]ethyl]benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H34 N4 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-11
_chem_comp.pdbx_modified_date                   2021-02-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       490.660
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Y97
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LOS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Y97  C01  C1   C  0  1  N  N  N   1.832  12.044  32.128   -1.153   1.385  -2.719  C01  Y97   1  
Y97  C02  C2   C  0  1  N  N  R   1.792  11.758  33.677   -1.146   1.021  -1.233  C02  Y97   2  
Y97  C04  C3   C  0  1  N  N  N   2.005   9.713  35.267   -3.273   1.854  -0.385  C04  Y97   3  
Y97  C06  C4   C  0  1  Y  N  N   1.467   7.180  35.505   -5.397   2.698   0.605  C06  Y97   4  
Y97  C07  C5   C  0  1  N  N  N   0.014   7.482  35.006   -4.779   4.069   0.703  C07  Y97   5  
Y97  C08  C6   C  0  1  Y  N  N   1.888   5.854  35.845   -6.693   2.493   1.034  C08  Y97   6  
Y97  C09  C7   C  0  1  Y  N  N   3.205   5.545  36.293   -7.267   1.239   0.941  C09  Y97   7  
Y97  C10  C8   C  0  1  Y  N  N   4.182   6.559  36.440   -6.542   0.175   0.415  C10  Y97   8  
Y97  C12  C9   C  0  1  N  N  N   6.725   6.078  36.000   -8.502  -1.297   0.783  C12  Y97   9  
Y97  C13  C10  C  0  1  N  N  N   7.372   7.398  35.340   -9.504  -1.584  -0.344  C13  Y97  10  
Y97  C15  C11  C  0  1  N  N  N   8.168   5.855  36.644   -8.816  -2.742   1.196  C15  Y97  11  
Y97  C16  C12  C  0  1  Y  N  N   3.736   7.886  36.088   -5.240   0.371  -0.019  C16  Y97  12  
Y97  O17  O1   O  0  1  N  N  N   1.453  10.400  36.154   -2.809   2.977  -0.409  O17  Y97  13  
Y97  C18  C13  C  0  1  Y  N  N   2.771  12.719  34.474   -0.346  -0.240  -1.029  C18  Y97  14  
Y97  C19  C14  C  0  1  Y  N  N   4.150  12.626  34.256   -0.917  -1.470  -1.299  C19  Y97  15  
Y97  C20  C15  C  0  1  Y  N  N   5.035  13.448  34.977   -0.190  -2.633  -1.113  C20  Y97  16  
Y97  C21  C16  C  0  1  Y  N  N   4.529  14.350  35.946    1.111  -2.571  -0.657  C21  Y97  17  
Y97  C22  C17  C  0  1  Y  N  N   3.126  14.466  36.228    1.693  -1.332  -0.383  C22  Y97  18  
Y97  C23  C18  C  0  1  Y  N  N   2.525  15.443  37.315    3.086  -1.258   0.105  C23  Y97  19  
Y97  C24  C19  C  0  1  Y  N  N   3.004  16.143  38.416    3.892  -2.316   0.324  C24  Y97  20  
Y97  C25  C20  C  0  1  Y  N  N   1.980  16.964  39.180    5.153  -1.996   0.781  C25  Y97  21  
Y97  C26  C21  C  0  1  Y  N  N   0.701  16.865  38.662    5.384  -0.689   0.937  C26  Y97  22  
Y97  C27  C22  C  0  1  N  N  N  -0.705  17.466  38.982    6.679  -0.090   1.421  C27  Y97  23  
Y97  C29  C23  C  0  1  N  N  R  -1.089  18.620  36.524    8.828   0.768   0.708  C29  Y97  24  
Y97  C33  C24  C  0  1  N  N  N  -2.104  18.712  35.291    9.869  -0.340   0.980  C33  Y97  25  
Y97  N03  N1   N  0  1  N  N  N   2.159  10.340  34.001   -2.522   0.806  -0.778  N03  Y97  26  
Y97  C05  C25  C  0  1  Y  N  N   2.411   8.207  35.634   -4.662   1.637   0.075  C05  Y97  27  
Y97  N11  N2   N  0  1  N  N  N   5.577   6.257  36.897   -7.126  -1.090   0.324  N11  Y97  28  
Y97  N14  N3   N  0  1  N  N  N   8.778   6.990  35.798   -9.163  -3.013  -0.211  N14  Y97  29  
Y97  N28  N4   N  0  1  N  N  N  -1.574  17.681  37.690    7.554   0.181   0.272  N28  Y97  30  
Y97  C30  C26  C  0  1  N  N  N  -0.974  20.118  36.960    9.457   1.602  -0.431  C30  Y97  31  
Y97  C31  C27  C  0  1  N  N  N  -1.327  20.888  35.683   10.804   0.899  -0.712  C31  Y97  32  
Y97  O32  O2   O  0  1  N  N  N  -2.044  20.080  34.815   10.615  -0.457  -0.251  O32  Y97  33  
Y97  S34  S1   S  0  1  Y  N  N   0.765  15.771  37.251    3.952   0.226   0.484  S34  Y97  34  
Y97  C35  C28  C  0  1  Y  N  N   2.290  13.616  35.463    0.955  -0.163  -0.577  C35  Y97  35  
Y97  H1   H1   H  0  1  N  N  N   1.557  13.092  31.941   -0.129   1.545  -3.059  H1   Y97  36  
Y97  H2   H2   H  0  1  N  N  N   2.847  11.858  31.747   -1.602   0.573  -3.291  H2   Y97  37  
Y97  H3   H3   H  0  1  N  N  N   1.120  11.381  31.614   -1.731   2.297  -2.868  H3   Y97  38  
Y97  H4   H4   H  0  1  N  N  N   0.769  11.951  34.031   -0.697   1.834  -0.662  H4   Y97  39  
Y97  H5   H5   H  0  1  N  N  N  -0.023   7.397  33.910   -4.879   4.582  -0.253  H5   Y97  40  
Y97  H6   H6   H  0  1  N  N  N  -0.685   6.759  35.453   -5.288   4.642   1.478  H6   Y97  41  
Y97  H7   H7   H  0  1  N  N  N  -0.272   8.501  35.305   -3.723   3.974   0.956  H7   Y97  42  
Y97  H8   H8   H  0  1  N  N  N   1.173   5.049  35.758   -7.261   3.315   1.445  H8   Y97  43  
Y97  H9   H9   H  0  1  N  N  N   3.462   4.522  36.524   -8.281   1.085   1.279  H9   Y97  44  
Y97  H10  H10  H  0  1  N  N  N   6.532   5.323  35.224   -8.834  -0.546   1.500  H10  Y97  45  
Y97  H11  H11  H  0  1  N  N  N   7.016   8.337  35.788  -10.536  -1.358  -0.075  H11  Y97  46  
Y97  H12  H12  H  0  1  N  N  N   7.259   7.447  34.247   -9.213  -1.155  -1.303  H12  Y97  47  
Y97  H13  H13  H  0  1  N  N  N   8.598   4.865  36.431   -7.943  -3.295   1.543  H13  Y97  48  
Y97  H14  H14  H  0  1  N  N  N   8.202   6.044  37.727   -9.664  -2.825   1.877  H14  Y97  49  
Y97  H15  H15  H  0  1  N  N  N   4.448   8.694  36.172   -4.675  -0.454  -0.428  H15  Y97  50  
Y97  H16  H16  H  0  1  N  N  N   4.535  11.922  33.533   -1.935  -1.524  -1.656  H16  Y97  51  
Y97  H17  H17  H  0  1  N  N  N   6.098  13.392  34.793   -0.641  -3.591  -1.325  H17  Y97  52  
Y97  H18  H18  H  0  1  N  N  N   5.223  14.972  36.491    1.677  -3.479  -0.512  H18  Y97  53  
Y97  H19  H19  H  0  1  N  N  N   4.042  16.105  38.711    3.574  -3.335   0.155  H19  Y97  54  
Y97  H20  H20  H  0  1  N  N  N   2.226  17.566  40.042    5.899  -2.747   0.997  H20  Y97  55  
Y97  H21  H21  H  0  1  N  N  N  -0.569  18.437  39.481    6.473   0.842   1.948  H21  Y97  56  
Y97  H22  H22  H  0  1  N  N  N  -1.238  16.779  39.656    7.173  -0.788   2.097  H22  Y97  57  
Y97  H23  H23  H  0  1  N  N  N  -0.113  18.270  36.158    8.681   1.383   1.595  H23  Y97  58  
Y97  H24  H24  H  0  1  N  N  N  -3.125  18.468  35.619   10.529  -0.049   1.797  H24  Y97  59  
Y97  H25  H25  H  0  1  N  N  N  -1.799  18.018  34.494    9.370  -1.281   1.214  H25  Y97  60  
Y97  H26  H26  H  0  1  N  N  N   2.546   9.788  33.262   -2.892  -0.090  -0.758  H26  Y97  61  
Y97  H27  H27  H  0  1  N  N  N   5.510   5.408  37.421   -6.621  -1.833  -0.043  H27  Y97  62  
Y97  H28  H28  H  0  1  N  N  N   9.373   6.675  35.059   -9.988  -3.589  -0.276  H28  Y97  63  
Y97  H30  H30  H  0  1  N  N  N  -2.454  18.044  37.998    7.093   0.775  -0.401  H30  Y97  64  
Y97  H32  H32  H  0  1  N  N  N   0.048  20.354  37.292    8.822   1.579  -1.317  H32  Y97  65  
Y97  H33  H33  H  0  1  N  N  N  -1.684  20.348  37.768    9.621   2.629  -0.106  H33  Y97  66  
Y97  H34  H34  H  0  1  N  N  N  -0.400  21.217  35.190   11.022   0.910  -1.779  H34  Y97  67  
Y97  H35  H35  H  0  1  N  N  N  -1.934  21.767  35.946   11.607   1.382  -0.155  H35  Y97  68  
Y97  H36  H36  H  0  1  N  N  N   1.226  13.653  35.643    1.401   0.799  -0.371  H36  Y97  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Y97  C01  C02  SING  N  N   1  
Y97  C02  N03  SING  N  N   2  
Y97  C02  C18  SING  N  N   3  
Y97  N03  C04  SING  N  N   4  
Y97  C19  C18  DOUB  Y  N   5  
Y97  C19  C20  SING  Y  N   6  
Y97  C18  C35  SING  Y  N   7  
Y97  O32  C33  SING  N  N   8  
Y97  O32  C31  SING  N  N   9  
Y97  C20  C21  DOUB  Y  N  10  
Y97  C07  C06  SING  N  N  11  
Y97  C04  C05  SING  N  N  12  
Y97  C04  O17  DOUB  N  N  13  
Y97  C33  C29  SING  N  N  14  
Y97  C13  N14  SING  N  N  15  
Y97  C13  C12  SING  N  N  16  
Y97  C35  C22  DOUB  Y  N  17  
Y97  C06  C05  DOUB  Y  N  18  
Y97  C06  C08  SING  Y  N  19  
Y97  C05  C16  SING  Y  N  20  
Y97  C31  C30  SING  N  N  21  
Y97  N14  C15  SING  N  N  22  
Y97  C08  C09  DOUB  Y  N  23  
Y97  C21  C22  SING  Y  N  24  
Y97  C12  C15  SING  N  N  25  
Y97  C12  N11  SING  N  N  26  
Y97  C16  C10  DOUB  Y  N  27  
Y97  C22  C23  SING  N  N  28  
Y97  C09  C10  SING  Y  N  29  
Y97  C10  N11  SING  N  N  30  
Y97  C29  C30  SING  N  N  31  
Y97  C29  N28  SING  N  N  32  
Y97  S34  C23  SING  Y  N  33  
Y97  S34  C26  SING  Y  N  34  
Y97  C23  C24  DOUB  Y  N  35  
Y97  N28  C27  SING  N  N  36  
Y97  C24  C25  SING  Y  N  37  
Y97  C26  C27  SING  N  N  38  
Y97  C26  C25  DOUB  Y  N  39  
Y97  C01  H1   SING  N  N  40  
Y97  C01  H2   SING  N  N  41  
Y97  C01  H3   SING  N  N  42  
Y97  C02  H4   SING  N  N  43  
Y97  C07  H5   SING  N  N  44  
Y97  C07  H6   SING  N  N  45  
Y97  C07  H7   SING  N  N  46  
Y97  C08  H8   SING  N  N  47  
Y97  C09  H9   SING  N  N  48  
Y97  C12  H10  SING  N  N  49  
Y97  C13  H11  SING  N  N  50  
Y97  C13  H12  SING  N  N  51  
Y97  C15  H13  SING  N  N  52  
Y97  C15  H14  SING  N  N  53  
Y97  C16  H15  SING  N  N  54  
Y97  C19  H16  SING  N  N  55  
Y97  C20  H17  SING  N  N  56  
Y97  C21  H18  SING  N  N  57  
Y97  C24  H19  SING  N  N  58  
Y97  C25  H20  SING  N  N  59  
Y97  C27  H21  SING  N  N  60  
Y97  C27  H22  SING  N  N  61  
Y97  C29  H23  SING  N  N  62  
Y97  C33  H24  SING  N  N  63  
Y97  C33  H25  SING  N  N  64  
Y97  N03  H26  SING  N  N  65  
Y97  N11  H27  SING  N  N  66  
Y97  N14  H28  SING  N  N  67  
Y97  N28  H30  SING  N  N  68  
Y97  C30  H32  SING  N  N  69  
Y97  C30  H33  SING  N  N  70  
Y97  C31  H34  SING  N  N  71  
Y97  C31  H35  SING  N  N  72  
Y97  C35  H36  SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Y97  InChI             InChI                 1.03   "InChI=1S/C28H34N4O2S/c1-18-6-7-22(32-24-14-29-15-24)13-26(18)28(33)31-19(2)20-4-3-5-21(12-20)27-9-8-25(35-27)16-30-23-10-11-34-17-23/h3-9,12-13,19,23-24,29-30,32H,10-11,14-17H2,1-2H3,(H,31,33)/t19-,23-/m1/s1"  
Y97  InChIKey          InChI                 1.03   JZRRCGQQCZGHEA-AUSIDOKSSA-N  
Y97  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H](NC(=O)c1cc(NC2CNC2)ccc1C)c3cccc(c3)c4sc(CN[C@@H]5CCOC5)cc4"  
Y97  SMILES            CACTVS                3.385  "C[CH](NC(=O)c1cc(NC2CNC2)ccc1C)c3cccc(c3)c4sc(CN[CH]5CCOC5)cc4"  
Y97  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)N[C@H](C)c2cccc(c2)c3ccc(s3)CN[C@@H]4CCOC4)NC5CNC5"  
Y97  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)NC(C)c2cccc(c2)c3ccc(s3)CNC4CCOC4)NC5CNC5"  
#
_pdbx_chem_comp_identifier.comp_id          Y97
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3-[5-[[[(3~{R})-oxolan-3-yl]amino]methyl]thiophen-2-yl]phenyl]ethyl]benzamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Y97  "Create component"  2021-02-11  RCSB  
Y97  "Initial release"   2021-02-24  RCSB  
##
