data_648
# 
_chem_comp.id                                    648 
_chem_comp.name                                  "1-[3-(thiophen-3-yl)benzyl]piperidin-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H17 N O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-01-23 
_chem_comp.pdbx_modified_date                    2023-02-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        271.377 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     648 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5F6P 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
648 C2  C1  C 0 1 N N N 17.815 -10.905 -0.279 -4.207 -1.265 1.554  C2  648 1  
648 C7  C2  C 0 1 Y N N 17.493 -12.927 4.049  0.400  0.481  -0.673 C7  648 2  
648 C6  C3  C 0 1 Y N N 17.828 -11.823 4.687  -0.743 1.248  -0.777 C6  648 3  
648 C4  C4  C 0 1 N N N 19.250 -10.953 1.732  -3.839 0.765  0.163  C4  648 4  
648 C10 C5  C 0 1 Y N N 17.482 -12.859 6.914  0.330  3.028  0.421  C10 648 5  
648 C9  C6  C 0 1 Y N N 17.114 -14.128 6.190  1.479  2.270  0.530  C9  648 6  
648 C15 C7  C 0 1 Y N N 17.396 -16.136 3.195  3.902  0.623  0.741  C15 648 7  
648 C13 C8  C 0 1 Y N N 15.616 -16.210 4.791  2.849  -1.072 -0.411 C13 648 8  
648 O   O1  O 0 1 N N N 15.829 -10.243 2.614  -1.676 -1.829 -0.928 O   648 9  
648 C   C9  C 0 1 N N N 16.754 -10.489 1.911  -2.591 -1.304 -0.329 C   648 10 
648 N   N1  N 0 1 N N N 18.071 -10.660 2.523  -2.807 -0.002 -0.523 N   648 11 
648 C3  C10 C 0 1 N N N 18.707 -11.783 0.581  -4.904 -0.167 0.742  C3  648 12 
648 C1  C11 C 0 1 N N N 16.484 -10.589 0.399  -3.420 -2.155 0.589  C1  648 13 
648 C5  C12 C 0 1 N N N 18.226 -10.537 3.959  -1.954 0.700  -1.485 C5  648 14 
648 C11 C13 C 0 1 Y N N 17.811 -11.791 6.213  -0.778 2.519  -0.231 C11 648 15 
648 C8  C14 C 0 1 Y N N 17.116 -14.155 4.880  1.520  0.989  -0.018 C8  648 16 
648 C12 C15 C 0 1 Y N N 16.712 -15.478 4.279  2.751  0.170  0.097  C12 648 17 
648 C14 C16 C 0 1 Y N N 16.790 -17.365 2.853  4.916  -0.238 0.747  C14 648 18 
648 S   S1  S 0 1 Y N N 15.418 -17.727 3.912  4.454  -1.715 -0.087 S   648 19 
648 H3  H1  H 0 1 N N N 17.614 -11.426 -1.227 -3.526 -0.812 2.274  H3  648 20 
648 H2  H2  H 0 1 N N N 18.340 -9.961  -0.484 -4.953 -1.862 2.079  H2  648 21 
648 H10 H3  H 0 1 N N N 17.485 -12.964 2.970  0.425  -0.512 -1.096 H10 648 22 
648 H7  H4  H 0 1 N N N 19.984 -11.526 2.318  -3.384 1.338  0.971  H7  648 23 
648 H6  H5  H 0 1 N N N 19.716 -10.027 1.364  -4.308 1.450  -0.543 H6  648 24 
648 H12 H6  H 0 1 N N N 17.477 -12.824 7.993  0.297  4.020  0.845  H12 648 25 
648 H11 H7  H 0 1 N N N 16.849 -15.013 6.749  2.344  2.669  1.039  H11 648 26 
648 H16 H8  H 0 1 N N N 18.270 -15.736 2.702  3.966  1.600  1.196  H16 648 27 
648 H14 H9  H 0 1 N N N 14.987 -15.886 5.607  2.066  -1.592 -0.942 H14 648 28 
648 H4  H10 H 0 1 N N N 18.123 -12.627 0.977  -5.474 -0.619 -0.070 H4  648 29 
648 H5  H11 H 0 1 N N N 19.542 -12.167 -0.024 -5.573 0.400  1.390  H5  648 30 
648 H1  H12 H 0 1 N N N 16.087 -9.634  0.023  -2.767 -2.816 1.158  H1  648 31 
648 H   H13 H 0 1 N N N 15.759 -11.392 0.198  -4.115 -2.753 0.000  H   648 32 
648 H9  H14 H 0 1 N N N 19.279 -10.311 4.185  -2.514 1.520  -1.936 H9  648 33 
648 H8  H15 H 0 1 N N N 17.589 -9.714  4.316  -1.637 0.005  -2.264 H8  648 34 
648 H13 H16 H 0 1 N N N 18.073 -10.878 6.728  -1.674 3.115  -0.315 H13 648 35 
648 H15 H17 H 0 1 N N N 17.122 -18.003 2.047  5.880  -0.057 1.198  H15 648 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
648 C2  C1  SING N N 1  
648 C2  C3  SING N N 2  
648 C1  C   SING N N 3  
648 C3  C4  SING N N 4  
648 C4  N   SING N N 5  
648 C   N   SING N N 6  
648 C   O   DOUB N N 7  
648 N   C5  SING N N 8  
648 C14 C15 DOUB Y N 9  
648 C14 S   SING Y N 10 
648 C15 C12 SING Y N 11 
648 S   C13 SING Y N 12 
648 C5  C6  SING N N 13 
648 C7  C6  DOUB Y N 14 
648 C7  C8  SING Y N 15 
648 C12 C13 DOUB Y N 16 
648 C12 C8  SING N N 17 
648 C6  C11 SING Y N 18 
648 C8  C9  DOUB Y N 19 
648 C9  C10 SING Y N 20 
648 C11 C10 DOUB Y N 21 
648 C2  H3  SING N N 22 
648 C2  H2  SING N N 23 
648 C7  H10 SING N N 24 
648 C4  H7  SING N N 25 
648 C4  H6  SING N N 26 
648 C10 H12 SING N N 27 
648 C9  H11 SING N N 28 
648 C15 H16 SING N N 29 
648 C13 H14 SING N N 30 
648 C3  H4  SING N N 31 
648 C3  H5  SING N N 32 
648 C1  H1  SING N N 33 
648 C1  H   SING N N 34 
648 C5  H9  SING N N 35 
648 C5  H8  SING N N 36 
648 C11 H13 SING N N 37 
648 C14 H15 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
648 SMILES           ACDLabs              12.01 "C1CC(=O)N(CC1)Cc2cc(ccc2)c3ccsc3"                                                                          
648 InChI            InChI                1.03  "InChI=1S/C16H17NOS/c18-16-6-1-2-8-17(16)11-13-4-3-5-14(10-13)15-7-9-19-12-15/h3-5,7,9-10,12H,1-2,6,8,11H2" 
648 InChIKey         InChI                1.03  UMRKGGGHCYSVML-UHFFFAOYSA-N                                                                                 
648 SMILES_CANONICAL CACTVS               3.385 "O=C1CCCCN1Cc2cccc(c2)c3cscc3"                                                                              
648 SMILES           CACTVS               3.385 "O=C1CCCCN1Cc2cccc(c2)c3cscc3"                                                                              
648 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1cc(cc(c1)c2ccsc2)CN3CCCCC3=O"                                                                            
648 SMILES           "OpenEye OEToolkits" 2.0.4 "c1cc(cc(c1)c2ccsc2)CN3CCCCC3=O"                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
648 "SYSTEMATIC NAME" ACDLabs              12.01 "1-[3-(thiophen-3-yl)benzyl]piperidin-2-one"       
648 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "1-[(3-thiophen-3-ylphenyl)methyl]piperidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
648 "Create component" 2016-01-23 RCSB 
648 "Initial release"  2023-02-08 RCSB 
# 
