data_688
#

_chem_comp.id                                   688
_chem_comp.name                                 "2-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-6-[3-(4,5-DIHYDRO-1H-IMIDAZOL-2-YL)PHENOXY]PYRIDINE-4-CARBOXYLIC ACID"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H17 N5 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ZK-806688
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       431.401
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    688
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1QBN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
688  C1    C1    C  0  1  Y  N  N   8.436  25.098  19.790  -1.696  -1.016  -1.890  C1    688   1  
688  C2    C2    C  0  1  Y  N  N   9.262  26.194  19.385  -2.503  -0.177  -1.117  C2    688   2  
688  C3    C3    C  0  1  Y  N  N  10.650  25.933  19.285  -1.912   0.516  -0.057  C3    688   3  
688  C4    C4    C  0  1  Y  N  N  11.078  24.573  19.286  -0.557   0.348   0.186  C4    688   4  
688  N5    N5    N  0  1  Y  N  N  10.264  23.549  19.569   0.171  -0.460  -0.565  N5    688   5  
688  C6    C6    C  0  1  Y  N  N   8.936  23.795  19.704  -0.348  -1.129  -1.580  C6    688   6  
688  O1    O1    O  0  1  N  N  N  12.338  24.264  18.891   0.026   1.016   1.212  O1    688   7  
688  O2    O2    O  0  1  N  N  N   8.179  22.717  20.060   0.444  -1.941  -2.324  O2    688   8  
688  C7    C7    C  0  1  N  N  N   8.786  27.479  19.486  -3.946  -0.027  -1.414  C7    688   9  
688  O3    O3    O  0  1  N  N  N   9.517  28.453  19.413  -4.442  -0.637  -2.339  O3    688  10  
688  O4    O4    O  0  1  N  N  N   7.478  27.686  19.686  -4.707   0.785  -0.657  O4    688  11  
688  C11   C11   C  0  1  Y  N  N   8.777  21.557  20.501   1.045  -1.155  -3.257  C11   688  12  
688  C12   C12   C  0  1  Y  N  N   8.549  20.491  19.610   0.695   0.177  -3.368  C12   688  13  
688  C13   C13   C  0  1  Y  N  N   9.019  19.208  19.872   1.311   0.979  -4.330  C13   688  14  
688  C14   C14   C  0  1  Y  N  N   9.772  18.971  21.062   2.284   0.435  -5.169  C14   688  15  
688  C15   C15   C  0  1  Y  N  N  10.026  20.043  21.951   2.633  -0.893  -5.051  C15   688  16  
688  C16   C16   C  0  1  Y  N  N   9.514  21.337  21.666   2.018  -1.692  -4.098  C16   688  17  
688  C17   C17   C  0  1  N  N  N   8.772  18.159  18.940   0.936   2.404  -4.456  C17   688  18  
688  N11   N11   N  0  1  N  N  N   8.023  18.243  17.867   0.110   2.939  -3.601  N11   688  19  
688  N12   N12   N  0  1  N  N  N   9.308  16.950  19.089   1.460   3.167  -5.478  N12   688  20  
688  O11   O11   O  0  1  N  N  N   9.817  22.335  22.553   2.364  -3.001  -3.985  O11   688  21  
688  C21   C21   C  0  1  Y  N  N  13.442  25.043  18.822  -0.010   0.189   2.291  C21   688  22  
688  C22   C22   C  0  1  Y  N  N  13.578  26.061  19.788  -0.476  -1.111   2.152  C22   688  23  
688  C23   C23   C  0  1  Y  N  N  14.723  26.887  19.769  -0.515  -1.956   3.246  C23   688  24  
688  C24   C24   C  0  1  Y  N  N  15.663  26.687  18.747  -0.092  -1.512   4.482  C24   688  25  
688  C25   C25   C  0  1  Y  N  N  15.520  25.699  17.762   0.377  -0.206   4.630  C25   688  26  
688  C26   C26   C  0  1  Y  N  N  14.378  24.860  17.776   0.422   0.643   3.525  C26   688  27  
688  C27   C27   C  0  1  Y  N  N  16.435  25.449  16.716   0.832   0.272   5.954  C27   688  28  
688  N21   N21   N  0  1  Y  N  N  17.525  26.145  16.394   0.943  -0.485   7.083  N21   688  29  
688  N22   N22   N  0  1  Y  N  N  16.518  24.226  16.137   1.203   1.500   6.242  N22   688  30  
688  C28   C28   C  0  1  Y  N  N  17.670  24.124  15.319   1.545   1.565   7.534  C28   688  31  
688  C29   C29   C  0  1  Y  N  N  18.244  25.555  15.333   1.395   0.340   8.076  C29   688  32  
688  H1    H1    H  0  1  N  N  N   7.412  25.257  20.169  -2.115  -1.569  -2.718  H1    688  33  
688  H3    H3    H  0  1  N  N  N  11.373  26.761  19.208  -2.503   1.174   0.562  H3    688  34  
688  HO4   HO4   H  0  1  N  N  N   7.148  28.574  19.755  -5.650   0.883  -0.851  HO4   688  35  
688  H12   H12   H  0  1  N  N  N   7.985  20.666  18.678  -0.057   0.595  -2.716  H12   688  36  
688  H14   H14   H  0  1  N  N  N  10.156  17.963  21.293   2.764   1.055  -5.912  H14   688  37  
688  H15   H15   H  0  1  N  N  N  10.621  19.870  22.863   3.386  -1.312  -5.701  H15   688  38  
688  HN11  HN11  H  0  0  N  N  N   7.788  18.780  18.701  -0.197   2.425  -2.839  HN11  688  39  
688  H121  1H12  H  0  0  N  N  N   9.131  16.199  18.421   1.158   4.080  -5.605  H121  688  40  
688  H122  2H12  H  0  0  N  N  N   9.057  16.609  20.017   2.133   2.792  -6.067  H122  688  41  
688  HO11  HO11  H  0  0  N  N  N  10.318  22.185  23.345   3.091  -3.044  -3.349  HO11  688  42  
688  H22   H22   H  0  1  N  N  N  12.795  26.209  20.551  -0.809  -1.463   1.187  H22   688  43  
688  H23   H23   H  0  1  N  N  N  14.879  27.667  20.532  -0.879  -2.966   3.132  H23   688  44  
688  H24   H24   H  0  1  N  N  N  16.554  27.335  18.716  -0.124  -2.174   5.334  H24   688  45  
688  H26   H26   H  0  1  N  N  N  14.223  24.091  17.000   0.784   1.654   3.634  H26   688  46  
688  HN21  HN21  H  0  0  N  N  N  17.772  27.002  16.887   0.741  -1.430   7.165  HN21  688  47  
688  H28   H28   H  0  1  N  N  N  18.017  23.203  14.819   1.888   2.448   8.053  H28   688  48  
688  H29   H29   H  0  1  N  N  N  19.009  26.052  14.713   1.593   0.063   9.101  H29   688  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
688  C1   C2    DOUB  Y  N   1  
688  C1   C6    SING  Y  N   2  
688  C1   H1    SING  N  N   3  
688  C2   C3    SING  Y  N   4  
688  C2   C7    SING  N  N   5  
688  C3   C4    DOUB  Y  N   6  
688  C3   H3    SING  N  N   7  
688  C4   N5    SING  Y  N   8  
688  C4   O1    SING  N  N   9  
688  N5   C6    DOUB  Y  N  10  
688  C6   O2    SING  N  N  11  
688  O1   C21   SING  N  N  12  
688  O2   C11   SING  N  N  13  
688  C7   O3    DOUB  N  N  14  
688  C7   O4    SING  N  N  15  
688  O4   HO4   SING  N  N  16  
688  C11  C12   DOUB  Y  N  17  
688  C11  C16   SING  Y  N  18  
688  C12  C13   SING  Y  N  19  
688  C12  H12   SING  N  N  20  
688  C13  C14   DOUB  Y  N  21  
688  C13  C17   SING  N  N  22  
688  C14  C15   SING  Y  N  23  
688  C14  H14   SING  N  N  24  
688  C15  C16   DOUB  Y  N  25  
688  C15  H15   SING  N  N  26  
688  C16  O11   SING  N  N  27  
688  C17  N11   DOUB  N  N  28  
688  C17  N12   SING  N  N  29  
688  N11  HN11  SING  N  N  30  
688  N12  H121  SING  N  N  31  
688  N12  H122  SING  N  N  32  
688  O11  HO11  SING  N  N  33  
688  C21  C22   DOUB  Y  N  34  
688  C21  C26   SING  Y  N  35  
688  C22  C23   SING  Y  N  36  
688  C22  H22   SING  N  N  37  
688  C23  C24   DOUB  Y  N  38  
688  C23  H23   SING  N  N  39  
688  C24  C25   SING  Y  N  40  
688  C24  H24   SING  N  N  41  
688  C25  C26   DOUB  Y  N  42  
688  C25  C27   SING  Y  N  43  
688  C26  H26   SING  N  N  44  
688  C27  N21   SING  Y  N  45  
688  C27  N22   DOUB  Y  N  46  
688  N21  C29   SING  Y  N  47  
688  N21  HN21  SING  N  N  48  
688  N22  C28   SING  Y  N  49  
688  C28  C29   DOUB  Y  N  50  
688  C28  H28   SING  N  N  51  
688  C29  H29   SING  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
688  SMILES            ACDLabs               10.04  "O=C(O)c2cc(nc(Oc1cc(C(=[N@H])N)ccc1O)c2)Oc3cccc(c3)c4nccn4"  
688  SMILES_CANONICAL  CACTVS                3.341  "NC(=N)c1ccc(O)c(Oc2cc(cc(Oc3cccc(c3)c4[nH]ccn4)n2)C(O)=O)c1"  
688  SMILES            CACTVS                3.341  "NC(=N)c1ccc(O)c(Oc2cc(cc(Oc3cccc(c3)c4[nH]ccn4)n2)C(O)=O)c1"  
688  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1cc(cc(c1)Oc2cc(cc(n2)Oc3cc(ccc3O)C(=N)N)C(=O)O)c4[nH]ccn4"  
688  SMILES            "OpenEye OEToolkits"  1.5.0  "c1cc(cc(c1)Oc2cc(cc(n2)Oc3cc(ccc3O)C(=N)N)C(=O)O)c4[nH]ccn4"  
688  InChI             InChI                 1.03   "InChI=1S/C22H17N5O5/c23-20(24)12-4-5-16(28)17(9-12)32-19-11-14(22(29)30)10-18(27-19)31-15-3-1-2-13(8-15)21-25-6-7-26-21/h1-11,28H,(H3,23,24)(H,25,26)(H,29,30)"  
688  InChIKey          InChI                 1.03   ILFWHJBPGCBXAY-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
688  "SYSTEMATIC NAME"  ACDLabs               10.04  "2-(5-carbamimidoyl-2-hydroxyphenoxy)-6-[3-(1H-imidazol-2-yl)phenoxy]pyridine-4-carboxylic acid"  
688  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-(5-carbamimidoyl-2-hydroxy-phenoxy)-6-[3-(1H-imidazol-2-yl)phenoxy]pyridine-4-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
688  "Create component"      1999-07-08  RCSB  
688  "Modify aromatic_flag"  2011-06-04  RCSB  
688  "Modify descriptor"     2011-06-04  RCSB  
688  "Modify synonyms"       2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     688
_pdbx_chem_comp_synonyms.name        ZK-806688
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
