data_778
#

_chem_comp.id                                   778
_chem_comp.name                                 "4-[(5-{[4-(3-CHLOROPHENYL)-3-OXOPIPERAZIN-1-YL]METHYL}-1H-IMIDAZOL-1-YL)METHYL]BENZONITRILE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H20 Cl N5 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "L-778,123"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-02-04
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       405.880
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    778
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1S63
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
778  N1    N1    N   0  1  N  N  R  18.561  135.205  -0.060   0.037   0.367   0.628  N1    778   1  
778  C2    C2    C   0  1  N  N  N  17.265  135.644   0.465   0.600  -0.532   1.646  C2    778   2  
778  C3    C3    C   0  1  N  N  N  19.752  135.207   0.790  -1.322   0.707   1.069  C3    778   3  
778  C4    C4    C   0  1  N  N  N  18.950  135.892  -1.299   0.821   1.605   0.685  C4    778   4  
778  C5    C5    C   0  1  N  N  N  16.328  135.043  -0.596   1.957  -1.043   1.161  C5    778   5  
778  C7    C7    C   0  1  Y  N  N  19.595  134.126   1.857  -1.922   1.711   0.119  C7    778   6  
778  C8    C8    C   0  1  N  N  N  17.872  135.664  -2.402   2.287   1.306   0.546  C8    778   7  
778  N9    N9    N   0  1  N  N  N  16.593  135.244  -2.023   2.796   0.088   0.768  N9    778   8  
778  N11   N11   N   0  1  Y  N  N  20.102  132.867   1.704  -2.578   1.437  -1.050  N11   778   9  
778  C12   C12   C   0  1  Y  N  N  18.961  134.245   3.040  -1.911   3.051   0.255  C12   778  10  
778  O13   O13   O   0  1  N  N  N  18.154  135.847  -3.571   3.036   2.200   0.213  O13   778  11  
778  C14   C14   C   0  1  Y  N  N  15.565  135.004  -2.907   4.174  -0.108   0.623  C14   778  12  
778  C16   C16   C   0  1  N  N  N  20.865  132.320   0.557  -2.834   0.109  -1.613  C16   778  13  
778  C17   C17   C   0  1  Y  N  N  19.810  132.153   2.774  -2.952   2.620  -1.585  C17   778  14  
778  N18   N18   N   0  1  Y  N  N  19.096  132.955   3.655  -2.547   3.581  -0.800  N18   778  15  
778  C20   C20   C   0  1  Y  N  N  15.030  133.727  -2.832   4.661  -0.888  -0.417  C20   778  16  
778  C21   C21   C   0  1  Y  N  N  15.030  135.947  -3.852   5.058   0.482   1.517  C21   778  17  
778  C25   C25   C   0  1  Y  N  N  20.051  132.206  -0.740  -4.069  -0.476  -0.978  C25   778  18  
778  C26   C26   C   0  1  Y  N  N  13.977  133.325  -3.654   6.023  -1.084  -0.553  C26   778  19  
778  C27   C27   C   0  1  Y  N  N  13.967  135.545  -4.693   6.418   0.288   1.373  C27   778  20  
778  C28   C28   C   0  1  Y  N  N  20.616  132.593  -1.977  -5.318  -0.155  -1.478  C28   778  21  
778  C29   C29   C   0  1  Y  N  N  18.737  131.718  -0.735  -3.948  -1.336   0.099  C29   778  22  
778  C30   C30   C   0  1  Y  N  N  13.440  134.232  -4.591   6.900  -0.493   0.340  C30   778  23  
778  CL31  CL31  CL  0  0  N  N  N  13.384  131.716  -3.463   6.633  -2.065  -1.849  CL31  778  24  
778  C32   C32   C   0  1  Y  N  N  19.881  132.484  -3.180  -6.453  -0.688  -0.902  C32   778  25  
778  C33   C33   C   0  1  Y  N  N  18.008  131.610  -1.924  -5.074  -1.872   0.688  C33   778  26  
778  C34   C34   C   0  1  Y  N  N  18.587  131.995  -3.156  -6.338  -1.552   0.189  C34   778  27  
778  C35   C35   C   0  1  N  N  N  17.895  131.879  -4.284  -7.512  -2.108   0.793  C35   778  28  
778  N36   N36   N   0  1  N  N  N  17.286  131.773  -5.280  -8.443  -2.549   1.272  N36   778  29  
778  H21A  1H2   H   0  0  N  N  N  17.159  136.740   0.642  -0.074  -1.375   1.801  H21A  778  30  
778  H22   2H2   H   0  1  N  N  N  17.048  135.361   1.521   0.728   0.012   2.582  H22   778  31  
778  H31   1H3   H   0  1  N  N  N  19.962  136.211   1.228  -1.936  -0.193   1.081  H31   778  32  
778  H32A  2H3   H   0  0  N  N  N  20.694  135.094   0.204  -1.283   1.133   2.071  H32A  778  33  
778  H41   1H4   H   0  1  N  N  N  19.967  135.589  -1.641   0.508   2.268  -0.121  H41   778  34  
778  H42   2H4   H   0  1  N  N  N  19.150  136.976  -1.129   0.647   2.098   1.642  H42   778  35  
778  H51   1H5   H   0  1  N  N  N  15.290  135.389  -0.381   1.812  -1.702   0.305  H51   778  36  
778  H52   2H5   H   0  1  N  N  N  16.244  133.947  -0.407   2.446  -1.595   1.964  H52   778  37  
778  H12   H12   H   0  1  N  N  N  18.463  135.158   3.408  -1.467   3.603   1.071  H12   778  38  
778  H161  1H16  H   0  0  N  N  N  21.318  131.336   0.822  -2.984   0.193  -2.690  H161  778  39  
778  H162  2H16  H   0  0  N  N  N  21.793  132.915   0.385  -1.981  -0.540  -1.415  H162  778  40  
778  H17   H17   H   0  1  N  N  N  20.104  131.098   2.906  -3.494   2.749  -2.510  H17   778  41  
778  H20   H20   H   0  1  N  N  N  15.451  133.015  -2.102   3.976  -1.348  -1.115  H20   778  42  
778  H21   H21   H   0  1  N  N  N  15.432  136.971  -3.931   4.682   1.093   2.325  H21   778  43  
778  H27   H27   H   0  1  N  N  N  13.550  136.254  -5.427   7.105   0.747   2.068  H27   778  44  
778  H28   H28   H   0  1  N  N  N  21.646  132.986  -2.004  -5.406   0.513  -2.322  H28   778  45  
778  H29   H29   H   0  1  N  N  N  18.270  131.415   0.217  -2.969  -1.583   0.484  H29   778  46  
778  H30   H30   H   0  1  N  N  N  12.609  133.915  -5.243   7.964  -0.644   0.229  H30   778  47  
778  H32   H32   H   0  1  N  N  N  20.321  132.783  -4.146  -7.428  -0.436  -1.293  H32   778  48  
778  H33   H33   H   0  1  N  N  N  16.976  131.221  -1.890  -4.978  -2.540   1.531  H33   778  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
778  N1   C2    SING  N  N   1  
778  N1   C3    SING  N  N   2  
778  N1   C4    SING  N  N   3  
778  C2   C5    SING  N  N   4  
778  C2   H21A  SING  N  N   5  
778  C2   H22   SING  N  N   6  
778  C3   C7    SING  N  N   7  
778  C3   H31   SING  N  N   8  
778  C3   H32A  SING  N  N   9  
778  C4   C8    SING  N  N  10  
778  C4   H41   SING  N  N  11  
778  C4   H42   SING  N  N  12  
778  C5   N9    SING  N  N  13  
778  C5   H51   SING  N  N  14  
778  C5   H52   SING  N  N  15  
778  C7   N11   SING  Y  N  16  
778  C7   C12   DOUB  Y  N  17  
778  C8   N9    SING  N  N  18  
778  C8   O13   DOUB  N  N  19  
778  N9   C14   SING  N  N  20  
778  N11  C16   SING  N  N  21  
778  N11  C17   SING  Y  N  22  
778  C12  N18   SING  Y  N  23  
778  C12  H12   SING  N  N  24  
778  C14  C20   DOUB  Y  N  25  
778  C14  C21   SING  Y  N  26  
778  C16  C25   SING  N  N  27  
778  C16  H161  SING  N  N  28  
778  C16  H162  SING  N  N  29  
778  C17  N18   DOUB  Y  N  30  
778  C17  H17   SING  N  N  31  
778  C20  C26   SING  Y  N  32  
778  C20  H20   SING  N  N  33  
778  C21  C27   DOUB  Y  N  34  
778  C21  H21   SING  N  N  35  
778  C25  C28   DOUB  Y  N  36  
778  C25  C29   SING  Y  N  37  
778  C26  C30   DOUB  Y  N  38  
778  C26  CL31  SING  N  N  39  
778  C27  C30   SING  Y  N  40  
778  C27  H27   SING  N  N  41  
778  C28  C32   SING  Y  N  42  
778  C28  H28   SING  N  N  43  
778  C29  C33   DOUB  Y  N  44  
778  C29  H29   SING  N  N  45  
778  C30  H30   SING  N  N  46  
778  C32  C34   DOUB  Y  N  47  
778  C32  H32   SING  N  N  48  
778  C33  C34   SING  Y  N  49  
778  C33  H33   SING  N  N  50  
778  C34  C35   SING  N  N  51  
778  C35  N36   TRIP  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
778  SMILES            ACDLabs               10.04  "N#Cc1ccc(cc1)Cn2c(cnc2)CN4CC(=O)N(c3cccc(Cl)c3)CC4"  
778  SMILES_CANONICAL  CACTVS                3.341  "Clc1cccc(c1)N2CCN(CC2=O)Cc3cncn3Cc4ccc(cc4)C#N"  
778  SMILES            CACTVS                3.341  "Clc1cccc(c1)N2CCN(CC2=O)Cc3cncn3Cc4ccc(cc4)C#N"  
778  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1cc(cc(c1)Cl)N2CC[N@@](CC2=O)Cc3cncn3Cc4ccc(cc4)C#N"  
778  SMILES            "OpenEye OEToolkits"  1.5.0  "c1cc(cc(c1)Cl)N2CCN(CC2=O)Cc3cncn3Cc4ccc(cc4)C#N"  
778  InChI             InChI                 1.03   "InChI=1S/C22H20ClN5O/c23-19-2-1-3-20(10-19)28-9-8-26(15-22(28)29)14-21-12-25-16-27(21)13-18-6-4-17(11-24)5-7-18/h1-7,10,12,16H,8-9,13-15H2"  
778  InChIKey          InChI                 1.03   JNUGFGAVPBYSHF-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
778  "SYSTEMATIC NAME"  ACDLabs               10.04  "4-[(5-{[4-(3-chlorophenyl)-3-oxopiperazin-1-yl]methyl}-1H-imidazol-1-yl)methyl]benzonitrile"  
778  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "4-[[5-[[(1R)-4-(3-chlorophenyl)-3-oxo-piperazin-1-yl]methyl]imidazol-1-yl]methyl]benzonitrile"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
778  "Create component"   2004-02-04  RCSB  
778  "Modify descriptor"  2011-06-04  RCSB  
778  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     778
_pdbx_chem_comp_synonyms.name        "L-778,123"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
