data_9P8
# 
_chem_comp.id                                    9P8 
_chem_comp.name                                  
;(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(pyridin-2-ylmethoxymethyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H40 N4 O16" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-06-20 
_chem_comp.pdbx_modified_date                    2018-04-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        676.624 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9P8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5O9P 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9P8 C4  C1  C 0 1 N N S 9.093  17.080 -17.212 -6.880 -3.098 0.845  C4  9P8 1  
9P8 C5  C2  C 0 1 N N R 9.581  15.629 -17.224 -5.403 -3.067 0.445  C5  9P8 2  
9P8 C6  C3  C 0 1 N N N 8.811  14.817 -16.190 -5.053 -4.348 -0.314 C6  9P8 3  
9P8 N1  N1  N 0 1 Y N N 20.345 7.522  -16.667 8.760  -4.113 -0.649 N1  9P8 4  
9P8 C3  C4  C 0 1 N N S 9.850  17.853 -18.288 -7.240 -1.787 1.551  C3  9P8 5  
9P8 CBQ C5  C 0 1 Y N N 22.493 6.640  -16.794 7.279  -2.438 -1.366 CBQ 9P8 6  
9P8 CBS C6  C 0 1 Y N N 22.523 6.615  -15.417 7.704  -2.613 -2.675 CBS 9P8 7  
9P8 CBV C7  C 0 1 Y N N 21.465 7.062  -14.629 8.677  -3.566 -2.931 CBV 9P8 8  
9P8 CBT C8  C 0 1 Y N N 20.340 7.553  -15.257 9.187  -4.306 -1.881 CBT 9P8 9  
9P8 CBP C9  C 0 1 Y N N 21.366 7.113  -17.440 7.836  -3.215 -0.368 CBP 9P8 10 
9P8 CBN C10 C 0 1 N N N 21.354 7.139  -18.851 7.381  -3.033 1.057  CBN 9P8 11 
9P8 OBO O1  O 0 1 N N N 20.121 7.698  -19.376 6.383  -2.013 1.113  OBO 9P8 12 
9P8 CBM C11 C 0 1 N N N 19.952 7.540  -20.812 5.882  -1.761 2.427  CBM 9P8 13 
9P8 CBI C12 C 0 1 Y N N 18.763 8.365  -21.337 4.840  -0.673 2.368  CBI 9P8 14 
9P8 CBH C13 C 0 1 Y N N 17.540 7.936  -21.611 4.419  -0.015 1.263  CBH 9P8 15 
9P8 NBL N2  N 0 1 Y N N 18.815 9.649  -21.579 4.146  -0.172 3.396  NBL 9P8 16 
9P8 NBK N3  N 0 1 Y N N 17.716 10.006 -21.954 3.352  0.739  2.958  NBK 9P8 17 
9P8 NBJ N4  N 0 1 Y N N 16.875 9.014  -21.991 3.482  0.867  1.684  NBJ 9P8 18 
9P8 CAM C14 C 0 1 N N R 15.502 9.227  -22.494 2.743  1.804  0.835  CAM 9P8 19 
9P8 CAL C15 C 0 1 N N R 14.906 10.580 -22.132 1.240  1.599  1.035  CAL 9P8 20 
9P8 OBB O2  O 0 1 N N N 14.530 10.574 -20.745 0.880  0.278  0.626  OBB 9P8 21 
9P8 OBE O3  O 0 1 N N N 15.795 9.218  -23.876 3.091  3.144  1.190  OBE 9P8 22 
9P8 CAN C16 C 0 1 N N R 14.661 9.349  -24.714 2.442  4.144  0.401  CAN 9P8 23 
9P8 CAR C17 C 0 1 N N N 15.163 9.155  -26.172 2.909  5.530  0.849  CAR 9P8 24 
9P8 OAU O4  O 0 1 N N N 15.896 10.335 -26.569 4.303  5.676  0.571  OAU 9P8 25 
9P8 CAO C18 C 0 1 N N R 13.953 10.684 -24.487 0.927  4.032  0.584  CAO 9P8 26 
9P8 OBA O5  O 0 1 N N N 12.716 10.691 -25.259 0.273  4.993  -0.248 OBA 9P8 27 
9P8 CAK C19 C 0 1 N N S 13.647 10.866 -22.986 0.475  2.622  0.190  CAK 9P8 28 
9P8 OBG O6  O 0 1 N N N 13.186 12.199 -22.663 -0.928 2.486  0.427  OBG 9P8 29 
9P8 CAH C20 C 0 1 N N S 11.921 12.214 -21.964 -1.580 1.573  -0.458 CAH 9P8 30 
9P8 CAG C21 C 0 1 N N R 11.568 13.665 -21.605 -3.043 1.411  -0.036 CAG 9P8 31 
9P8 OAZ O7  O 0 1 N N N 12.552 14.227 -20.680 -3.102 0.850  1.277  OAZ 9P8 32 
9P8 OBD O8  O 0 1 N N N 10.893 11.639 -22.783 -1.524 2.081  -1.792 OBD 9P8 33 
9P8 CAI C22 C 0 1 N N R 9.686  11.564 -21.977 -2.129 1.228  -2.767 CAI 9P8 34 
9P8 CAQ C23 C 0 1 N N N 8.628  10.781 -22.737 -1.985 1.856  -4.154 CAQ 9P8 35 
9P8 OAT O9  O 0 1 N N N 8.382  11.494 -23.951 -0.601 1.914  -4.509 OAT 9P8 36 
9P8 CAJ C24 C 0 1 N N R 9.178  12.964 -21.748 -3.614 1.053  -2.438 CAJ 9P8 37 
9P8 OAY O10 O 0 1 N N N 7.934  12.907 -21.028 -4.208 0.154  -3.377 OAY 9P8 38 
9P8 CAF C25 C 0 1 N N S 10.193 13.738 -20.935 -3.751 0.479  -1.024 CAF 9P8 39 
9P8 O1  O11 O 0 1 N N N 9.825  15.110 -20.835 -5.135 0.381  -0.681 O1  9P8 40 
9P8 C1  C26 C 0 1 N N S 10.108 15.720 -19.559 -5.433 -0.678 0.231  C1  9P8 41 
9P8 O5  O12 O 0 1 N N N 9.366  15.029 -18.525 -5.162 -1.935 -0.393 O5  9P8 42 
9P8 O6  O13 O 0 1 N N N 7.443  14.733 -16.566 -3.650 -4.373 -0.585 O6  9P8 43 
9P8 O4  O14 O 0 1 N N N 9.363  17.687 -15.935 -7.113 -4.196 1.730  O4  9P8 44 
9P8 O3  O15 O 0 1 N N N 9.326  19.179 -18.392 -8.634 -1.779 1.863  O3  9P8 45 
9P8 C2  C27 C 0 1 N N R 9.687  17.182 -19.623 -6.913 -0.614 0.622  C2  9P8 46 
9P8 O2  O16 O 0 1 N N N 10.472 17.915 -20.586 -7.176 0.618  1.298  O2  9P8 47 
9P8 H1  H1  H 0 1 N N N 8.016  17.104 -17.433 -7.497 -3.213 -0.047 H1  9P8 48 
9P8 H2  H2  H 0 1 N N N 10.651 15.610 -16.971 -4.786 -2.995 1.341  H2  9P8 49 
9P8 H3  H3  H 0 1 N N N 9.236  13.804 -16.130 -5.321 -5.214 0.291  H3  9P8 50 
9P8 H4  H4  H 0 1 N N N 8.891  15.306 -15.208 -5.605 -4.376 -1.253 H4  9P8 51 
9P8 H5  H5  H 0 1 N N N 10.917 17.883 -18.024 -6.660 -1.697 2.470  H5  9P8 52 
9P8 H6  H6  H 0 1 N N N 23.342 6.293  -17.364 6.522  -1.705 -1.130 H6  9P8 53 
9P8 H7  H7  H 0 1 N N N 23.406 6.232  -14.927 7.286  -2.020 -3.475 H7  9P8 54 
9P8 H8  H8  H 0 1 N N N 21.524 7.025  -13.551 9.031  -3.729 -3.938 H8  9P8 55 
9P8 H9  H9  H 0 1 N N N 19.500 7.940  -14.699 9.946  -5.051 -2.072 H9  9P8 56 
9P8 H10 H10 H 0 1 N N N 21.465 6.111  -19.226 6.965  -3.970 1.428  H10 9P8 57 
9P8 H11 H11 H 0 1 N N N 22.198 7.750  -19.202 8.231  -2.744 1.675  H11 9P8 58 
9P8 H12 H12 H 0 1 N N N 19.776 6.478  -21.036 5.434  -2.671 2.826  H12 9P8 59 
9P8 H13 H13 H 0 1 N N N 20.870 7.874  -21.318 6.701  -1.445 3.074  H13 9P8 60 
9P8 H14 H14 H 0 1 N N N 17.167 6.925  -21.540 4.761  -0.163 0.250  H14 9P8 61 
9P8 H15 H15 H 0 1 N N N 14.830 8.408  -22.197 2.999  1.627  -0.210 H15 9P8 62 
9P8 H16 H16 H 0 1 N N N 15.651 11.366 -22.323 0.990  1.735  2.087  H16 9P8 63 
9P8 H17 H17 H 0 1 N N N 15.295 10.399 -20.210 1.331  -0.423 1.116  H17 9P8 64 
9P8 H18 H18 H 0 1 N N N 13.946 8.542  -24.495 2.693  3.997  -0.650 H18 9P8 65 
9P8 H19 H19 H 0 1 N N N 14.304 9.009  -26.843 2.349  6.294  0.310  H19 9P8 66 
9P8 H20 H20 H 0 1 N N N 15.821 8.275  -26.223 2.739  5.642  1.920  H20 9P8 67 
9P8 H21 H21 H 0 1 N N N 16.209 10.229 -27.460 4.669  6.533  0.829  H21 9P8 68 
9P8 H22 H22 H 0 1 N N N 14.610 11.501 -24.819 0.671  4.218  1.627  H22 9P8 69 
9P8 H23 H23 H 0 1 N N N 12.265 11.516 -25.127 0.516  5.909  -0.057 H23 9P8 70 
9P8 H24 H24 H 0 1 N N N 12.873 10.136 -22.705 0.684  2.454  -0.867 H24 9P8 71 
9P8 H25 H25 H 0 1 N N N 12.012 11.640 -21.030 -1.081 0.605  -0.415 H25 9P8 72 
9P8 H26 H26 H 0 1 N N N 11.544 14.262 -22.529 -3.533 2.385  -0.039 H26 9P8 73 
9P8 H27 H27 H 0 1 N N N 12.315 15.123 -20.471 -2.668 1.386  1.954  H27 9P8 74 
9P8 H28 H28 H 0 1 N N N 9.891  11.076 -21.013 -1.637 0.256  -2.755 H28 9P8 75 
9P8 H29 H29 H 0 1 N N N 7.705  10.715 -22.142 -2.522 1.252  -4.885 H29 9P8 76 
9P8 H30 H30 H 0 1 N N N 8.994  9.768  -22.960 -2.399 2.864  -4.142 H30 9P8 77 
9P8 H31 H31 H 0 1 N N N 7.723  11.036 -24.460 -0.435 2.302  -5.379 H31 9P8 78 
9P8 H32 H32 H 0 1 N N N 9.035  13.462 -22.718 -4.115 2.019  -2.490 H32 9P8 79 
9P8 H33 H33 H 0 1 N N N 7.611  13.789 -20.882 -4.153 0.452  -4.295 H33 9P8 80 
9P8 H34 H34 H 0 1 N N N 10.264 13.290 -19.933 -3.293 -0.509 -0.985 H34 9P8 81 
9P8 H35 H35 H 0 1 N N N 11.186 15.668 -19.347 -4.816 -0.575 1.123  H35 9P8 82 
9P8 H36 H36 H 0 1 N N N 6.967  14.226 -15.919 -3.356 -5.159 -1.066 H36 9P8 83 
9P8 H37 H37 H 0 1 N N N 8.897  17.215 -15.255 -8.030 -4.276 2.026  H37 9P8 84 
9P8 H38 H38 H 0 1 N N N 9.419  19.623 -17.557 -8.932 -0.976 2.313  H38 9P8 85 
9P8 H39 H39 H 0 1 N N N 8.626  17.224 -19.909 -7.530 -0.677 -0.275 H39 9P8 86 
9P8 H40 H40 H 0 1 N N N 10.187 18.821 -20.603 -6.986 1.405  0.769  H40 9P8 87 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9P8 OAU CAR SING N N 1  
9P8 CAR CAN SING N N 2  
9P8 OBA CAO SING N N 3  
9P8 CAN CAO SING N N 4  
9P8 CAN OBE SING N N 5  
9P8 CAO CAK SING N N 6  
9P8 OAT CAQ SING N N 7  
9P8 OBE CAM SING N N 8  
9P8 CAK OBG SING N N 9  
9P8 CAK CAL SING N N 10 
9P8 OBD CAI SING N N 11 
9P8 OBD CAH SING N N 12 
9P8 CAQ CAI SING N N 13 
9P8 OBG CAH SING N N 14 
9P8 CAM CAL SING N N 15 
9P8 CAM NBJ SING N N 16 
9P8 CAL OBB SING N N 17 
9P8 NBJ NBK SING Y N 18 
9P8 NBJ CBH SING Y N 19 
9P8 CAI CAJ SING N N 20 
9P8 CAH CAG SING N N 21 
9P8 NBK NBL DOUB Y N 22 
9P8 CAJ OAY SING N N 23 
9P8 CAJ CAF SING N N 24 
9P8 CBH CBI DOUB Y N 25 
9P8 CAG CAF SING N N 26 
9P8 CAG OAZ SING N N 27 
9P8 NBL CBI SING Y N 28 
9P8 CBI CBM SING N N 29 
9P8 CAF O1  SING N N 30 
9P8 O1  C1  SING N N 31 
9P8 CBM OBO SING N N 32 
9P8 O2  C2  SING N N 33 
9P8 C2  C1  SING N N 34 
9P8 C2  C3  SING N N 35 
9P8 C1  O5  SING N N 36 
9P8 OBO CBN SING N N 37 
9P8 CBN CBP SING N N 38 
9P8 O5  C5  SING N N 39 
9P8 O3  C3  SING N N 40 
9P8 C3  C4  SING N N 41 
9P8 CBP CBQ DOUB Y N 42 
9P8 CBP N1  SING Y N 43 
9P8 C5  C4  SING N N 44 
9P8 C5  C6  SING N N 45 
9P8 C4  O4  SING N N 46 
9P8 CBQ CBS SING Y N 47 
9P8 N1  CBT DOUB Y N 48 
9P8 O6  C6  SING N N 49 
9P8 CBS CBV DOUB Y N 50 
9P8 CBT CBV SING Y N 51 
9P8 C4  H1  SING N N 52 
9P8 C5  H2  SING N N 53 
9P8 C6  H3  SING N N 54 
9P8 C6  H4  SING N N 55 
9P8 C3  H5  SING N N 56 
9P8 CBQ H6  SING N N 57 
9P8 CBS H7  SING N N 58 
9P8 CBV H8  SING N N 59 
9P8 CBT H9  SING N N 60 
9P8 CBN H10 SING N N 61 
9P8 CBN H11 SING N N 62 
9P8 CBM H12 SING N N 63 
9P8 CBM H13 SING N N 64 
9P8 CBH H14 SING N N 65 
9P8 CAM H15 SING N N 66 
9P8 CAL H16 SING N N 67 
9P8 OBB H17 SING N N 68 
9P8 CAN H18 SING N N 69 
9P8 CAR H19 SING N N 70 
9P8 CAR H20 SING N N 71 
9P8 OAU H21 SING N N 72 
9P8 CAO H22 SING N N 73 
9P8 OBA H23 SING N N 74 
9P8 CAK H24 SING N N 75 
9P8 CAH H25 SING N N 76 
9P8 CAG H26 SING N N 77 
9P8 OAZ H27 SING N N 78 
9P8 CAI H28 SING N N 79 
9P8 CAQ H29 SING N N 80 
9P8 CAQ H30 SING N N 81 
9P8 OAT H31 SING N N 82 
9P8 CAJ H32 SING N N 83 
9P8 OAY H33 SING N N 84 
9P8 CAF H34 SING N N 85 
9P8 C1  H35 SING N N 86 
9P8 O6  H36 SING N N 87 
9P8 O4  H37 SING N N 88 
9P8 O3  H38 SING N N 89 
9P8 C2  H39 SING N N 90 
9P8 O2  H40 SING N N 91 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9P8 InChI            InChI                1.03  
;InChI=1S/C27H40N4O16/c32-6-13-16(35)19(38)20(39)26(44-13)47-24-18(37)15(8-34)45-27(22(24)41)46-23-17(36)14(7-33)43-25(21(23)40)31-5-12(29-30-31)10-42-9-11-3-1-2-4-28-11/h1-5,13-27,32-41H,6-10H2/t13-,14-,15-,16-,17-,18-,19+,20-,21-,22-,23+,24+,25-,26+,27+/m1/s1
;
9P8 InChIKey         InChI                1.03  GZCRLDXRIWVPBY-FLQYNTDFSA-N 
9P8 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](CO)O[C@@H](O[C@H]3[C@H](O)[C@@H](CO)O[C@H]([C@@H]3O)n4cc(COCc5ccccn5)nn4)[C@@H]2O)[C@H](O)[C@@H](O)[C@@H]1O" 
9P8 SMILES           CACTVS               3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](CO)O[CH](O[CH]3[CH](O)[CH](CO)O[CH]([CH]3O)n4cc(COCc5ccccn5)nn4)[CH]2O)[CH](O)[CH](O)[CH]1O" 
9P8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccnc(c1)COCc2cn(nn2)[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)O" 
9P8 SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccnc(c1)COCc2cn(nn2)C3C(C(C(C(O3)CO)O)OC4C(C(C(C(O4)CO)O)OC5C(C(C(C(O5)CO)O)O)O)O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9P8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
;(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(pyridin-2-ylmethoxymethyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol
;
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9P8 "Create component" 2017-06-20 RCSB 
9P8 "Initial release"  2018-05-02 RCSB 
# 
