data_ED8
# 
_chem_comp.id                                    ED8 
_chem_comp.name                                  "5-{6-[(1-methylpiperidin-4-yl)oxy]-1H-benzimidazol-1-yl}-3-{[2-(trifluoromethyl)benzyl]oxy}thiophene-2-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H25 F3 N4 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-08-05 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        530.562 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ED8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2XNO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ED8 C01  C01  C 0 1 N N N -29.666 14.877 23.153 5.285  -4.378 2.004  C01  ED8 1  
ED8 N02  N02  N 0 1 N N N -28.990 14.329 21.992 5.463  -2.922 1.929  N02  ED8 2  
ED8 C03  C03  C 0 1 N N N -27.576 14.028 22.278 6.270  -2.551 0.760  C03  ED8 3  
ED8 C04  C04  C 0 1 N N N -26.884 13.077 21.267 6.556  -1.048 0.792  C04  ED8 4  
ED8 C05  C05  C 0 1 N N N -27.672 11.777 21.051 5.232  -0.280 0.785  C05  ED8 5  
ED8 O06  O06  O 0 1 N N N -27.406 10.997 19.906 5.491  1.122  0.873  O06  ED8 6  
ED8 C07  C07  C 0 1 Y N N -26.972 9.697  20.197 4.540  1.958  0.380  C07  ED8 7  
ED8 C08  C08  C 0 1 Y N N -27.284 9.035  21.389 4.779  3.329  0.333  C08  ED8 8  
ED8 C09  C09  C 0 1 Y N N -26.827 7.645  21.579 3.834  4.183  -0.159 C09  ED8 9  
ED8 C10  C10  C 0 1 Y N N -26.062 6.986  20.544 2.614  3.683  -0.622 C10  ED8 10 
ED8 N11  N11  N 0 1 Y N N -25.498 5.705  20.443 1.506  4.264  -1.153 N11  ED8 11 
ED8 C12  C12  C 0 1 Y N N -24.857 5.587  19.207 0.622  3.352  -1.430 C12  ED8 12 
ED8 N13  N13  N 0 1 Y N N -25.093 6.779  18.514 1.101  2.119  -1.094 N13  ED8 13 
ED8 C14  C14  C 0 1 Y N N -24.578 7.194  17.323 0.436  0.905  -1.245 C14  ED8 14 
ED8 C15  C15  C 0 1 Y N N -25.341 8.330  16.519 -0.821 0.656  -0.827 C15  ED8 15 
ED8 C16  C16  C 0 1 Y N N -24.395 8.693  15.069 -1.278 -0.616 -1.082 C16  ED8 16 
ED8 O17  O17  O 0 1 N N N -24.815 9.711  14.194 -2.520 -1.036 -0.729 O17  ED8 17 
ED8 C18  C18  C 0 1 N N N -25.947 10.464 14.558 -3.361 -0.090 -0.066 C18  ED8 18 
ED8 C19  C19  C 0 1 Y N N -25.815 11.557 15.616 -4.689 -0.730 0.245  C19  ED8 19 
ED8 C20  C20  C 0 1 Y N N -24.530 12.133 15.822 -4.924 -2.044 -0.113 C20  ED8 20 
ED8 C21  C21  C 0 1 Y N N -24.304 13.166 16.815 -6.143 -2.632 0.172  C21  ED8 21 
ED8 C22  C22  C 0 1 Y N N -25.469 13.645 17.644 -7.126 -1.905 0.817  C22  ED8 22 
ED8 C23  C23  C 0 1 Y N N -26.749 13.090 17.452 -6.891 -0.591 1.176  C23  ED8 23 
ED8 C24  C24  C 0 1 Y N N -26.984 12.050 16.450 -5.671 -0.005 0.895  C24  ED8 24 
ED8 C25  C25  C 0 1 N N N -28.387 11.531 16.328 -5.413 1.426  1.291  C25  ED8 25 
ED8 F26  F26  F 0 1 N N N -29.227 12.302 17.029 -4.321 1.478  2.164  F26  ED8 26 
ED8 F27  F27  F 0 1 N N N -28.811 11.519 15.064 -5.133 2.183  0.149  F27  ED8 27 
ED8 F28  F28  F 0 1 N N N -28.437 10.297 16.838 -6.545 1.945  1.929  F28  ED8 28 
ED8 C29  C29  C 0 1 Y N N -23.140 7.791  15.094 -0.372 -1.424 -1.723 C29  ED8 29 
ED8 C30  C30  C 0 1 N N N -22.071 7.682  14.035 -0.598 -2.769 -2.095 C30  ED8 30 
ED8 N31  N31  N 0 1 N N N -22.258 8.339  12.776 0.370  -3.466 -2.723 N31  ED8 31 
ED8 O32  O32  O 0 1 N N N -21.220 6.811  14.149 -1.667 -3.298 -1.849 O32  ED8 32 
ED8 S33  S33  S 0 1 Y N N -23.158 6.774  16.555 1.110  -0.524 -2.016 S33  ED8 33 
ED8 C34  C34  C 0 1 Y N N -25.765 7.655  19.360 2.370  2.300  -0.576 C34  ED8 34 
ED8 C35  C35  C 0 1 Y N N -26.214 9.027  19.156 3.341  1.443  -0.078 C35  ED8 35 
ED8 C36  C36  C 0 1 N N N -29.092 11.844 21.641 4.390  -0.721 1.986  C36  ED8 36 
ED8 C37  C37  C 0 1 N N N -29.735 13.234 21.373 4.166  -2.233 1.919  C37  ED8 37 
ED8 H01  H01  H 0 1 N N N -29.064 15.694 23.577 6.260  -4.859 2.086  H01  ED8 38 
ED8 H01A H01A H 0 0 N N N -30.651 15.265 22.854 4.683  -4.626 2.879  H01A ED8 39 
ED8 H01B H01B H 0 0 N N N -29.796 14.088 23.908 4.780  -4.730 1.105  H01B ED8 40 
ED8 H03  H03  H 0 1 N N N -27.025 14.980 22.269 7.211  -3.100 0.779  H03  ED8 41 
ED8 H03A H03A H 0 0 N N N -27.532 13.550 23.268 5.725  -2.796 -0.152 H03A ED8 42 
ED8 H04  H04  H 0 1 N N N -26.798 13.597 20.302 7.114  -0.803 1.696  H04  ED8 43 
ED8 H04A H04A H 0 0 N N N -25.887 12.820 21.655 7.143  -0.770 -0.083 H04A ED8 44 
ED8 H05  H05  H 0 1 N N N -27.182 11.028 21.690 4.691  -0.494 -0.137 H05  ED8 45 
ED8 H08  H08  H 0 1 N N N -27.852 9.535  22.160 5.720  3.720  0.690  H08  ED8 46 
ED8 H09  H09  H 0 1 N N N -27.064 7.119  22.492 4.030  5.245  -0.190 H09  ED8 47 
ED8 H12  H12  H 0 1 N N N -24.289 4.739  18.855 -0.350 3.542  -1.861 H12  ED8 48 
ED8 H15  H15  H 0 1 N N N -26.271 8.798  16.806 -1.424 1.400  -0.329 H15  ED8 49 
ED8 H18  H18  H 0 1 N N N -26.292 10.963 13.641 -2.886 0.231  0.861  H18  ED8 50 
ED8 H18A H18A H 0 0 N N N -26.683 9.745  14.948 -3.517 0.774  -0.713 H18A ED8 51 
ED8 H20  H20  H 0 1 N N N -23.700 11.791 15.222 -4.156 -2.612 -0.617 H20  ED8 52 
ED8 H21  H21  H 0 1 N N N -23.319 13.585 16.958 -6.326 -3.658 -0.109 H21  ED8 53 
ED8 H22  H22  H 0 1 N N N -25.321 14.415 18.387 -8.078 -2.364 1.040  H22  ED8 54 
ED8 H23  H23  H 0 1 N N N -27.573 13.439 18.056 -7.659 -0.023 1.679  H23  ED8 55 
ED8 HN31 HN31 H 0 0 N N N -21.693 8.085  11.991 1.221  -3.045 -2.919 HN31 ED8 56 
ED8 HN3A HN3A H 0 0 N N N -22.954 9.051  12.682 0.215  -4.389 -2.979 HN3A ED8 57 
ED8 H35  H35  H 0 1 N N N -25.984 9.542  18.235 3.159  0.379  -0.044 H35  ED8 58 
ED8 H36  H36  H 0 1 N N N -29.712 11.065 21.173 4.913  -0.471 2.909  H36  ED8 59 
ED8 H36A H36A H 0 0 N N N -29.038 11.677 22.727 3.428  -0.209 1.963  H36A ED8 60 
ED8 H37  H37  H 0 1 N N N -30.755 13.231 21.786 3.630  -2.481 1.002  H37  ED8 61 
ED8 H37A H37A H 0 0 N N N -29.760 13.402 20.286 3.579  -2.552 2.780  H37A ED8 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ED8 N02 C01  SING N N 1  
ED8 C01 H01  SING N N 2  
ED8 C01 H01A SING N N 3  
ED8 C01 H01B SING N N 4  
ED8 C37 N02  SING N N 5  
ED8 N02 C03  SING N N 6  
ED8 C04 C03  SING N N 7  
ED8 C03 H03  SING N N 8  
ED8 C03 H03A SING N N 9  
ED8 C05 C04  SING N N 10 
ED8 C04 H04  SING N N 11 
ED8 C04 H04A SING N N 12 
ED8 O06 C05  SING N N 13 
ED8 C05 C36  SING N N 14 
ED8 C05 H05  SING N N 15 
ED8 O06 C07  SING N N 16 
ED8 C35 C07  DOUB Y N 17 
ED8 C07 C08  SING Y N 18 
ED8 C08 C09  DOUB Y N 19 
ED8 C08 H08  SING N N 20 
ED8 C10 C09  SING Y N 21 
ED8 C09 H09  SING N N 22 
ED8 C34 C10  DOUB Y N 23 
ED8 N11 C10  SING Y N 24 
ED8 C12 N11  DOUB Y N 25 
ED8 N13 C12  SING Y N 26 
ED8 C12 H12  SING N N 27 
ED8 C14 N13  SING Y N 28 
ED8 N13 C34  SING Y N 29 
ED8 C15 C14  DOUB Y N 30 
ED8 S33 C14  SING Y N 31 
ED8 C16 C15  SING Y N 32 
ED8 C15 H15  SING N N 33 
ED8 O17 C16  SING N N 34 
ED8 C16 C29  DOUB Y N 35 
ED8 O17 C18  SING N N 36 
ED8 C18 C19  SING N N 37 
ED8 C18 H18  SING N N 38 
ED8 C18 H18A SING N N 39 
ED8 C19 C20  DOUB Y N 40 
ED8 C19 C24  SING Y N 41 
ED8 C20 C21  SING Y N 42 
ED8 C20 H20  SING N N 43 
ED8 C21 C22  DOUB Y N 44 
ED8 C21 H21  SING N N 45 
ED8 C23 C22  SING Y N 46 
ED8 C22 H22  SING N N 47 
ED8 C24 C23  DOUB Y N 48 
ED8 C23 H23  SING N N 49 
ED8 C25 C24  SING N N 50 
ED8 F27 C25  SING N N 51 
ED8 C25 F28  SING N N 52 
ED8 C25 F26  SING N N 53 
ED8 C30 C29  SING N N 54 
ED8 C29 S33  SING Y N 55 
ED8 N31 C30  SING N N 56 
ED8 C30 O32  DOUB N N 57 
ED8 N31 HN31 SING N N 58 
ED8 N31 HN3A SING N N 59 
ED8 C35 C34  SING Y N 60 
ED8 C35 H35  SING N N 61 
ED8 C37 C36  SING N N 62 
ED8 C36 H36  SING N N 63 
ED8 C36 H36A SING N N 64 
ED8 C37 H37  SING N N 65 
ED8 C37 H37A SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ED8 SMILES           ACDLabs              12.01 "FC(F)(F)c1ccccc1COc5c(sc(n4cnc3ccc(OC2CCN(C)CC2)cc34)c5)C(=O)N"                                                                                                                          
ED8 SMILES_CANONICAL CACTVS               3.370 "CN1CCC(CC1)Oc2ccc3ncn(c4sc(C(N)=O)c(OCc5ccccc5C(F)(F)F)c4)c3c2"                                                                                                                          
ED8 SMILES           CACTVS               3.370 "CN1CCC(CC1)Oc2ccc3ncn(c4sc(C(N)=O)c(OCc5ccccc5C(F)(F)F)c4)c3c2"                                                                                                                          
ED8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CN1CCC(CC1)Oc2ccc3c(c2)n(cn3)c4cc(c(s4)C(=O)N)OCc5ccccc5C(F)(F)F"                                                                                                                        
ED8 SMILES           "OpenEye OEToolkits" 1.7.0 "CN1CCC(CC1)Oc2ccc3c(c2)n(cn3)c4cc(c(s4)C(=O)N)OCc5ccccc5C(F)(F)F"                                                                                                                        
ED8 InChI            InChI                1.03  "InChI=1S/C26H25F3N4O3S/c1-32-10-8-17(9-11-32)36-18-6-7-20-21(12-18)33(15-31-20)23-13-22(24(37-23)25(30)34)35-14-16-4-2-3-5-19(16)26(27,28)29/h2-7,12-13,15,17H,8-11,14H2,1H3,(H2,30,34)" 
ED8 InChIKey         InChI                1.03  FNHUNERGHGEZMB-UHFFFAOYSA-N                                                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ED8 "SYSTEMATIC NAME" ACDLabs              12.01 "5-{6-[(1-methylpiperidin-4-yl)oxy]-1H-benzimidazol-1-yl}-3-{[2-(trifluoromethyl)benzyl]oxy}thiophene-2-carboxamide" 
ED8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "5-[6-(1-methylpiperidin-4-yl)oxybenzimidazol-1-yl]-3-[[2-(trifluoromethyl)phenyl]methoxy]thiophene-2-carboxamide"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ED8 "Create component"     2010-08-05 EBI  
ED8 "Modify aromatic_flag" 2011-06-04 RCSB 
ED8 "Modify descriptor"    2011-06-04 RCSB 
# 
