data_L98
#

_chem_comp.id                                   L98
_chem_comp.name                                 "(2R)-2-(3-{[AMINO(IMINO)METHYL]AMINO}PHENYL)-3-SULFANYLPROPANOIC ACID"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H13 N3 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2-(3-GUANIDINOPHENYL)-3-MERCAPTOPROPANOIC ACID"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2005-04-28
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       239.294
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    L98
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1ZG8
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L98  S     S     S  0  1  N  N  N  34.725  12.112  60.240  -3.592  -1.705   0.638  S     L98   1  
L98  C1    C1    C  0  1  N  N  N  35.683  11.546  58.865  -2.162  -0.677   1.073  C1    L98   2  
L98  C2    C2    C  0  1  N  N  R  37.153  11.520  59.244  -1.438  -0.244  -0.203  C2    L98   3  
L98  C3    C3    C  0  1  Y  N  N  38.018  11.287  58.046  -0.183   0.507   0.161  C3    L98   4  
L98  C4    C4    C  0  1  Y  N  N  38.775  10.098  57.866   1.047   0.039  -0.258  C4    L98   5  
L98  C5    C5    C  0  1  Y  N  N  39.598   9.899  56.717   2.203   0.728   0.084  C5    L98   6  
L98  C6    C6    C  0  1  Y  N  N  38.099  12.289  57.054  -0.265   1.667   0.909  C6    L98   7  
L98  C7    C7    C  0  1  Y  N  N  38.911  12.094  55.911   0.884   2.358   1.246  C7    L98   8  
L98  C8    C8    C  0  1  Y  N  N  39.655  10.911  55.745   2.118   1.892   0.836  C8    L98   9  
L98  N9    N9    N  0  1  N  N  N  40.309   8.782  56.509   3.451   0.253  -0.334  N9    L98  10  
L98  C10   C10   C  0  1  N  N  N  41.027   8.093  57.397   3.721  -1.096  -0.299  C10   L98  11  
L98  N11   N11   N  0  1  N  N  N  41.620   6.984  56.945   4.839  -1.550  -0.792  N11   L98  12  
L98  N12   N12   N  0  1  N  N  N  41.127   8.453  58.665   2.812  -1.965   0.258  N12   L98  13  
L98  C13   C13   C  0  1  N  N  N  37.376  10.510  60.315  -2.341   0.650  -1.014  C13   L98  14  
L98  O14   O14   O  0  1  N  N  N  37.134   9.290  60.159  -2.000   1.781  -1.269  O14   L98  15  
L98  O15   O15   O  0  1  N  N  N  37.803  10.890  61.450  -3.524   0.191  -1.452  O15   L98  16  
L98  HS    HS    H  0  1  N  N  N  33.805  12.128  60.002  -4.072  -1.970   1.867  HS    L98  17  
L98  H11A  1H1   H  0  0  N  N  N  35.329  10.559  58.484  -1.480  -1.250   1.701  H11A  L98  18  
L98  H12   2H1   H  0  1  N  N  N  35.496  12.149  57.945  -2.501   0.206   1.616  H12   L98  19  
L98  H2    H2    H  0  1  N  N  N  37.446  12.517  59.648  -1.178  -1.125  -0.790  H2    L98  20  
L98  H4    H4    H  0  1  N  N  N  38.722   9.310  58.636   1.110  -0.867  -0.842  H4    L98  21  
L98  H6    H6    H  0  1  N  N  N  37.527  13.224  57.172  -1.229   2.033   1.232  H6    L98  22  
L98  H7    H7    H  0  1  N  N  N  38.964  12.877  55.136   0.817   3.264   1.831  H7    L98  23  
L98  H8    H8    H  0  1  N  N  N  40.285  10.776  54.849   3.015   2.433   1.099  H8    L98  24  
L98  HN9   HN9   H  0  1  N  N  N  40.947   8.997  55.743   4.125   0.875  -0.649  HN9   L98  25  
L98  H11   H11   H  0  1  N  N  N  41.113   6.168  57.290   5.444  -0.949  -1.256  H11   L98  26  
L98  H121  1H12  H  0  0  N  N  N  41.676   7.926  59.344   3.003  -2.916   0.283  H121  L98  27  
L98  H122  2H12  H  0  0  N  N  N  40.180   8.539  59.035   1.982  -1.627   0.628  H122  L98  28  
L98  H15   H15   H  0  1  N  N  N  37.945  10.245  62.133  -4.103   0.764  -1.972  H15   L98  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L98  S    C1    SING  N  N   1  
L98  S    HS    SING  N  N   2  
L98  C1   C2    SING  N  N   3  
L98  C1   H11A  SING  N  N   4  
L98  C1   H12   SING  N  N   5  
L98  C2   C3    SING  N  N   6  
L98  C2   C13   SING  N  N   7  
L98  C2   H2    SING  N  N   8  
L98  C3   C4    DOUB  Y  N   9  
L98  C3   C6    SING  Y  N  10  
L98  C4   C5    SING  Y  N  11  
L98  C4   H4    SING  N  N  12  
L98  C5   C8    DOUB  Y  N  13  
L98  C5   N9    SING  N  N  14  
L98  C6   C7    DOUB  Y  N  15  
L98  C6   H6    SING  N  N  16  
L98  C7   C8    SING  Y  N  17  
L98  C7   H7    SING  N  N  18  
L98  C8   H8    SING  N  N  19  
L98  N9   C10   SING  N  N  20  
L98  N9   HN9   SING  N  N  21  
L98  C10  N11   DOUB  N  N  22  
L98  C10  N12   SING  N  N  23  
L98  N11  H11   SING  N  N  24  
L98  N12  H121  SING  N  N  25  
L98  N12  H122  SING  N  N  26  
L98  C13  O14   DOUB  N  N  27  
L98  C13  O15   SING  N  N  28  
L98  O15  H15   SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L98  SMILES            ACDLabs               10.04  "O=C(O)C(c1cc(NC(=[N@H])N)ccc1)CS"  
L98  SMILES_CANONICAL  CACTVS                3.341  "NC(=N)Nc1cccc(c1)[C@@H](CS)C(O)=O"  
L98  SMILES            CACTVS                3.341  "NC(=N)Nc1cccc(c1)[CH](CS)C(O)=O"  
L98  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1cc(cc(c1)NC(=N)N)[C@@H](CS)C(=O)O"  
L98  SMILES            "OpenEye OEToolkits"  1.5.0  "c1cc(cc(c1)NC(=N)N)C(CS)C(=O)O"  
L98  InChI             InChI                 1.03   "InChI=1S/C10H13N3O2S/c11-10(12)13-7-3-1-2-6(4-7)8(5-16)9(14)15/h1-4,8,16H,5H2,(H,14,15)(H4,11,12,13)/t8-/m1/s1"  
L98  InChIKey          InChI                 1.03   YHBCRXAIIVZWEW-MRVPVSSYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
L98  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R)-2-(3-carbamimidamidophenyl)-3-sulfanylpropanoic acid"  
L98  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R)-2-(3-carbamimidamidophenyl)-3-sulfanyl-propanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L98  "Create component"   2005-04-28  RCSB  
L98  "Modify descriptor"  2011-06-04  RCSB  
L98  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     L98
_pdbx_chem_comp_synonyms.name        "2-(3-GUANIDINOPHENYL)-3-MERCAPTOPROPANOIC ACID"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
