data_NF8
# 
_chem_comp.id                                    NF8 
_chem_comp.name                                  "(2~{R},3~{S},4~{S},5~{S})-5-fluoranyl-2-(hydroxymethyl)oxane-3,4-diol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H11 F O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-11-27 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        166.148 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NF8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6TJQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NF8 O1  O1  O 0 1 N N N N N N 24.821 11.573 22.511 3.515  -0.669 -0.208 O1  NF8 1  
NF8 C2  C1  C 0 1 N N N N N N 24.574 10.421 23.313 2.568  0.264  0.315  C2  NF8 2  
NF8 C3  C2  C 0 1 N N R N N N 24.247 9.198  22.470 1.173  -0.073 -0.214 C3  NF8 3  
NF8 O2  O2  O 0 1 N N N N N N 22.915 9.395  22.003 0.767  -1.347 0.291  O2  NF8 4  
NF8 C4  C3  C 0 1 N N N N N N 22.454 8.316  21.178 -0.519 -1.772 -0.166 C4  NF8 5  
NF8 C5  C4  C 0 1 N N S N N N 23.330 8.184  19.954 -1.580 -0.770 0.296  C5  NF8 6  
NF8 F1  F1  F 0 1 N N N N N N 22.885 7.116  19.167 -2.832 -1.154 -0.198 F1  NF8 7  
NF8 C6  C5  C 0 1 N N S N N N 24.755 7.901  20.369 -1.224 0.621  -0.238 C6  NF8 8  
NF8 O3  O3  O 0 1 N N N N N N 25.602 7.850  19.224 -2.169 1.576  0.249  O3  NF8 9  
NF8 C7  C6  C 0 1 N N S N N N 25.196 9.026  21.301 0.180  0.997  0.245  C7  NF8 10 
NF8 O4  O4  O 0 1 N N N N N N 26.480 8.771  21.818 0.551  2.262  -0.307 O4  NF8 11 
NF8 H5  H1  H 0 1 N N N N N N 25.021 12.313 23.072 4.423  -0.515 0.087  H5  NF8 12 
NF8 H7  H2  H 0 1 N N N N N N 23.725 10.629 23.981 2.567  0.209  1.404  H7  NF8 13 
NF8 H6  H3  H 0 1 N N N N N N 25.470 10.208 23.914 2.841  1.273  0.004  H6  NF8 14 
NF8 H8  H4  H 0 1 N N N N N N 24.298 8.302  23.107 1.196  -0.105 -1.304 H8  NF8 15 
NF8 H10 H5  H 0 1 N N N N N N 21.419 8.515  20.864 -0.518 -1.826 -1.255 H10 NF8 16 
NF8 H9  H6  H 0 1 N N N N N N 22.489 7.379  21.753 -0.744 -2.756 0.246  H9  NF8 17 
NF8 H11 H7  H 0 1 N N N N N N 23.300 9.125  19.386 -1.609 -0.746 1.385  H11 NF8 18 
NF8 H12 H8  H 0 1 N N N N N N 24.791 6.947  20.916 -1.244 0.609  -1.328 H12 NF8 19 
NF8 H13 H9  H 0 1 N N N N N N 26.494 7.672  19.497 -3.082 1.395  -0.014 H13 NF8 20 
NF8 H14 H10 H 0 1 N N N N N N 25.207 9.963  20.725 0.186  1.058  1.333  H14 NF8 21 
NF8 H15 H11 H 0 1 N N N N N N 26.736 9.481  22.395 -0.039 2.987  -0.060 H15 NF8 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NF8 F1 C5  SING N N 1  
NF8 O3 C6  SING N N 2  
NF8 C5 C6  SING N N 3  
NF8 C5 C4  SING N N 4  
NF8 C6 C7  SING N N 5  
NF8 C4 O2  SING N N 6  
NF8 C7 O4  SING N N 7  
NF8 C7 C3  SING N N 8  
NF8 O2 C3  SING N N 9  
NF8 C3 C2  SING N N 10 
NF8 O1 C2  SING N N 11 
NF8 O1 H5  SING N N 12 
NF8 C2 H7  SING N N 13 
NF8 C2 H6  SING N N 14 
NF8 C3 H8  SING N N 15 
NF8 C4 H10 SING N N 16 
NF8 C4 H9  SING N N 17 
NF8 C5 H11 SING N N 18 
NF8 C6 H12 SING N N 19 
NF8 O3 H13 SING N N 20 
NF8 C7 H14 SING N N 21 
NF8 O4 H15 SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NF8 InChI            InChI                1.03  "InChI=1S/C6H11FO4/c7-3-2-11-4(1-8)6(10)5(3)9/h3-6,8-10H,1-2H2/t3-,4+,5+,6+/m0/s1" 
NF8 InChIKey         InChI                1.03  JEWFVWVAXVTBRL-SLPGGIOYSA-N                                                        
NF8 SMILES_CANONICAL CACTVS               3.385 "OC[C@H]1OC[C@H](F)[C@@H](O)[C@@H]1O"                                              
NF8 SMILES           CACTVS               3.385 "OC[CH]1OC[CH](F)[CH](O)[CH]1O"                                                    
NF8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)F"                                          
NF8 SMILES           "OpenEye OEToolkits" 2.0.7 "C1C(C(C(C(O1)CO)O)O)F"                                                            
# 
_pdbx_chem_comp_identifier.comp_id           NF8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{S},4~{S},5~{S})-5-fluoranyl-2-(hydroxymethyl)oxane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NF8 "Create component" 2019-11-27 PDBE 
NF8 "Initial release"  2020-06-10 RCSB 
NF8 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            NF8 
_pdbx_chem_comp_pcm.modified_residue_id                GLU 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C4 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OE2 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
