data_S28
# 
_chem_comp.id                                    S28 
_chem_comp.name                                  "N-(benzylsulfonyl)glycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H27 N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-25 
_chem_comp.pdbx_modified_date                    2012-04-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        457.546 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     S28 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3RLW 
_chem_comp.pdbx_subcomponent_list                "PMS GLY PRO 00S" 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
S28 C7   C7   C 0 1 N N N 18.711 -16.801 26.449 -5.723  -0.056 0.826  C    PMS 1  
S28 S8   S8   S 0 1 N N N 17.780 -17.346 25.171 -4.665  0.995  -0.206 S    PMS 2  
S28 C6   C6   C 0 1 Y N N 19.875 -15.970 25.940 -7.146  0.029  0.337  C1   PMS 3  
S28 C1   C1   C 0 1 Y N N 19.848 -14.584 26.069 -7.601  -0.854 -0.624 C2   PMS 4  
S28 C2   C2   C 0 1 Y N N 20.900 -13.812 25.593 -8.906  -0.776 -1.073 C3   PMS 5  
S28 C3   C3   C 0 1 Y N N 21.993 -14.423 24.983 -9.756  0.185  -0.561 C4   PMS 6  
S28 C4   C4   C 0 1 Y N N 22.023 -15.804 24.859 -9.302  1.069  0.400  C5   PMS 7  
S28 C5   C5   C 0 1 Y N N 20.967 -16.576 25.329 -7.997  0.990  0.850  C6   PMS 8  
S28 O13  O13  O 0 1 N N N 18.483 -18.305 24.359 -4.559  0.460  -1.518 O2S  PMS 9  
S28 O14  O14  O 0 1 N N N 16.574 -17.938 25.679 -4.968  2.367  0.004  O1S  PMS 10 
S28 N9   N9   N 0 1 N N N 17.379 -16.092 24.263 -3.149  0.809  0.434  N    GLY 11 
S28 C10  C10  C 0 1 N N N 18.140 -15.853 23.059 -2.485  -0.495 0.378  CA   GLY 12 
S28 C11  C11  C 0 1 N N N 17.742 -14.538 22.440 -1.017  -0.325 0.677  C    GLY 13 
S28 O15  O15  O 0 1 N N N 16.683 -14.010 22.769 -0.570  0.777  0.914  O    GLY 14 
S28 N12  N12  N 0 1 N N N 18.590 -14.029 21.554 -0.202  -1.398 0.682  N    PRO 15 
S28 C16  C16  C 0 1 N N S 18.297 -12.769 20.883 1.242   -1.376 0.956  CA   PRO 16 
S28 C17  C17  C 0 1 N N N 16.947 -12.844 20.228 1.941   -0.492 -0.045 C    PRO 17 
S28 O18  O18  O 0 1 N N N 16.588 -13.869 19.652 1.300   0.069  -0.909 O    PRO 18 
S28 C21  C21  C 0 1 N N N 19.372 -12.615 19.816 1.756   -2.825 0.825  CB   PRO 19 
S28 C22  C22  C 0 1 N N N 20.461 -13.609 20.173 0.681   -3.496 -0.070 CG   PRO 20 
S28 C23  C23  C 0 1 N N N 19.861 -14.620 21.140 -0.611  -2.790 0.419  CD   PRO 21 
S28 N19  N19  N 0 1 N N N 16.170 -11.761 20.314 3.276   -0.325 0.019  N23  00S 22 
S28 C20  C20  C 0 1 N N N 14.835 -11.658 19.733 3.955   0.534  -0.955 C16  00S 23 
S28 C24  C24  C 0 1 Y N N 13.810 -11.662 20.840 5.434   0.551  -0.665 C17  00S 24 
S28 C31  C31  C 0 1 Y N N 13.319 -12.856 21.351 5.958   1.505  0.189  C22  00S 25 
S28 C29  C29  C 0 1 Y N N 12.374 -12.846 22.374 7.310   1.521  0.462  C21  00S 26 
S28 C28  C28  C 0 1 Y N N 11.910 -11.634 22.881 8.151   0.581  -0.133 C24  00S 27 
S28 C26  C26  C 0 1 N N N 10.897 -11.602 23.989 9.604   0.596  0.152  C27  00S 28 
S28 N30  N30  N 0 1 N N N 10.654 -10.518 24.589 10.386  -0.284 -0.405 N35  00S 29 
S28 N32  N32  N 0 1 N N N 10.284 -12.653 24.329 10.128  1.542  1.006  N34  00S 30 
S28 C27  C27  C 0 1 Y N N 12.404 -10.445 22.366 7.617   -0.375 -0.997 C19  00S 31 
S28 C25  C25  C 0 1 Y N N 13.350 -10.456 21.350 6.262   -0.385 -1.259 C18  00S 32 
S28 H7   H7   H 0 1 N N N 19.101 -17.666 27.006 -5.674  0.283  1.861  H2A  PMS 33 
S28 H7A  H7A  H 0 1 N N N 18.088 -16.182 27.111 -5.380  -1.089 0.766  H1   PMS 34 
S28 H1   H1   H 0 1 N N N 19.003 -14.106 26.542 -6.937  -1.609 -1.021 H2   PMS 35 
S28 H2   H2   H 0 1 N N N 20.870 -12.737 25.696 -9.261  -1.466 -1.824 H3   PMS 36 
S28 H3   H3   H 0 1 N N N 22.811 -13.826 24.609 -10.776 0.247  -0.912 H4   PMS 37 
S28 H4   H4   H 0 1 N N N 22.872 -16.283 24.394 -9.967  1.820  0.800  H5   PMS 38 
S28 H5   H5   H 0 1 N N N 20.995 -17.650 25.219 -7.642  1.680  1.601  H6   PMS 39 
S28 HN9  HN9  H 0 1 N N N 16.430 -16.234 23.980 -2.700  1.564  0.846  H    GLY 40 
S28 H10  H10  H 0 1 N N N 19.211 -15.826 23.308 -2.931  -1.162 1.116  HA2  GLY 41 
S28 H10A H10A H 0 0 N N N 17.945 -16.664 22.342 -2.605  -0.922 -0.617 HA3  GLY 42 
S28 H16  H16  H 0 1 N N N 18.288 -11.923 21.586 1.422   -1.006 1.965  HA   PRO 43 
S28 H21  H21  H 0 1 N N N 18.962 -12.831 18.818 2.731   -2.846 0.338  HB2  PRO 44 
S28 H21A H21A H 0 0 N N N 19.770 -11.589 19.811 1.802   -3.308 1.801  HB3  PRO 45 
S28 H22  H22  H 0 1 N N N 20.819 -14.119 19.267 0.867   -3.291 -1.124 HG2  PRO 46 
S28 H22A H22A H 0 0 N N N 21.307 -13.089 20.646 0.632   -4.569 0.116  HG3  PRO 47 
S28 H23  H23  H 0 1 N N N 20.522 -14.782 22.004 -0.978  -3.256 1.333  HD2  PRO 48 
S28 H23A H23A H 0 0 N N N 19.704 -15.592 20.649 -1.376  -2.820 -0.357 HD3  PRO 49 
S28 HN19 HN19 H 0 0 N N N 16.526 -10.969 20.809 3.789   -0.774 0.710  HN23 00S 50 
S28 H20  H20  H 0 1 N N N 14.754 -10.723 19.160 3.786   0.148  -1.960 H16  00S 51 
S28 H20A H20A H 0 0 N N N 14.658 -12.513 19.064 3.559   1.547  -0.883 H16A 00S 52 
S28 H31  H31  H 0 1 N N N 13.671 -13.796 20.954 5.307   2.235  0.646  H22  00S 53 
S28 H29  H29  H 0 1 N N N 12.001 -13.777 22.774 7.718   2.263  1.132  H21  00S 54 
S28 HN30 HN30 H 0 0 N N N 9.964  -10.632 25.303 11.338  -0.273 -0.218 HN35 00S 55 
S28 HN32 HN32 H 0 0 N N N 9.612  -12.623 25.069 9.545   2.197  1.421  HN34 00S 56 
S28 HN3A HN3A H 0 0 N N N 10.471 -13.515 23.858 11.080  1.552  1.193  HN3A 00S 57 
S28 H27  H27  H 0 1 N N N 12.050 -9.503  22.758 8.263   -1.106 -1.461 H19  00S 58 
S28 H25  H25  H 0 1 N N N 13.729 -9.525  20.956 5.848   -1.124 -1.928 H18  00S 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
S28 C1  C2   DOUB Y N 1  
S28 C1  C6   SING Y N 2  
S28 C2  C3   SING Y N 3  
S28 C3  C4   DOUB Y N 4  
S28 C4  C5   SING Y N 5  
S28 C5  C6   DOUB Y N 6  
S28 C6  C7   SING N N 7  
S28 C7  S8   SING N N 8  
S28 S8  N9   SING N N 9  
S28 S8  O13  DOUB N N 10 
S28 S8  O14  DOUB N N 11 
S28 N9  C10  SING N N 12 
S28 C10 C11  SING N N 13 
S28 C11 N12  SING N N 14 
S28 C11 O15  DOUB N N 15 
S28 N12 C16  SING N N 16 
S28 N12 C23  SING N N 17 
S28 C16 C17  SING N N 18 
S28 C16 C21  SING N N 19 
S28 C17 O18  DOUB N N 20 
S28 C17 N19  SING N N 21 
S28 N19 C20  SING N N 22 
S28 C20 C24  SING N N 23 
S28 C21 C22  SING N N 24 
S28 C22 C23  SING N N 25 
S28 C24 C25  DOUB Y N 26 
S28 C24 C31  SING Y N 27 
S28 C25 C27  SING Y N 28 
S28 C26 C28  SING N N 29 
S28 C26 N30  DOUB N N 30 
S28 C26 N32  SING N N 31 
S28 C27 C28  DOUB Y N 32 
S28 C28 C29  SING Y N 33 
S28 C29 C31  DOUB Y N 34 
S28 C1  H1   SING N N 35 
S28 C2  H2   SING N N 36 
S28 C3  H3   SING N N 37 
S28 C4  H4   SING N N 38 
S28 C5  H5   SING N N 39 
S28 C7  H7   SING N N 40 
S28 C7  H7A  SING N N 41 
S28 N9  HN9  SING N N 42 
S28 C10 H10  SING N N 43 
S28 C10 H10A SING N N 44 
S28 C16 H16  SING N N 45 
S28 N19 HN19 SING N N 46 
S28 C20 H20  SING N N 47 
S28 C20 H20A SING N N 48 
S28 C21 H21  SING N N 49 
S28 C21 H21A SING N N 50 
S28 C22 H22  SING N N 51 
S28 C22 H22A SING N N 52 
S28 C23 H23  SING N N 53 
S28 C23 H23A SING N N 54 
S28 C25 H25  SING N N 55 
S28 C27 H27  SING N N 56 
S28 C29 H29  SING N N 57 
S28 N30 HN30 SING N N 58 
S28 C31 H31  SING N N 59 
S28 N32 HN32 SING N N 60 
S28 N32 HN3A SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
S28 SMILES           ACDLabs              12.01 "O=C(NCc1ccc(C(=[N@H])N)cc1)C3N(C(=O)CNS(=O)(=O)Cc2ccccc2)CCC3"                                                                                                                         
S28 SMILES_CANONICAL CACTVS               3.370 "NC(=N)c1ccc(CNC(=O)[C@@H]2CCCN2C(=O)CN[S](=O)(=O)Cc3ccccc3)cc1"                                                                                                                        
S28 SMILES           CACTVS               3.370 "NC(=N)c1ccc(CNC(=O)[CH]2CCCN2C(=O)CN[S](=O)(=O)Cc3ccccc3)cc1"                                                                                                                          
S28 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "[H]/N=C(/c1ccc(cc1)CNC(=O)[C@@H]2CCCN2C(=O)CNS(=O)(=O)Cc3ccccc3)\\N"                                                                                                                   
S28 SMILES           "OpenEye OEToolkits" 1.7.2 "c1ccc(cc1)CS(=O)(=O)NCC(=O)N2CCCC2C(=O)NCc3ccc(cc3)C(=N)N"                                                                                                                             
S28 InChI            InChI                1.03  "InChI=1S/C22H27N5O4S/c23-21(24)18-10-8-16(9-11-18)13-25-22(29)19-7-4-12-27(19)20(28)14-26-32(30,31)15-17-5-2-1-3-6-17/h1-3,5-6,8-11,19,26H,4,7,12-15H2,(H3,23,24)(H,25,29)/t19-/m0/s1" 
S28 InChIKey         InChI                1.03  CEBNOQRCTYYHRQ-IBGZPJMESA-N                                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
S28 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(benzylsulfonyl)glycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide"                                            
S28 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-N-[(4-carbamimidoylphenyl)methyl]-1-[2-[(phenylmethyl)sulfonylamino]ethanoyl]pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
S28 "Create component"     2011-04-25 PDBJ 
S28 "Modify aromatic_flag" 2011-06-04 RCSB 
S28 "Modify descriptor"    2011-06-04 RCSB 
# 
