data_HB9
# 
_chem_comp.id                                    HB9 
_chem_comp.name                                  "~{N}-[2,4-bis(fluoranyl)-5-[[14-(2-hydroxyethylcarbamoyl)-2-oxidanylidene-6-tricyclo[9.4.0.0^{3,8}]pentadeca-1(15),3(8),4,6,11,13-hexaenyl]amino]phenyl]thiophene-2-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H23 F2 N3 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-01-11 
_chem_comp.pdbx_modified_date                    2017-09-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        547.572 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HB9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5MTY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HB9 CBB C1  C 0 1 Y N N 19.416 -6.577 -16.716 7.674   2.512  0.692  CBB HB9 1  
HB9 CBC C2  C 0 1 Y N N 18.814 -7.667 -16.193 8.977   2.839  0.981  CBC HB9 2  
HB9 CBD C3  C 0 1 Y N N 17.850 -8.169 -16.948 9.833   1.810  0.987  CBD HB9 3  
HB9 SBH S1  S 0 1 Y N N 17.789 -7.221 -18.210 9.031   0.348  0.624  SBH HB9 4  
HB9 CAS C4  C 0 1 Y N N 18.931 -6.223 -17.890 7.490   1.178  0.461  CAS HB9 5  
HB9 CAR C5  C 0 1 N N N 19.330 -5.193 -18.644 6.212   0.540  0.131  CAR HB9 6  
HB9 OBA O1  O 0 1 N N N 18.493 -4.588 -19.288 5.201   1.212  0.044  OBA HB9 7  
HB9 NAQ N1  N 0 1 N N N 20.660 -4.881 -18.649 6.156   -0.790 -0.075 NAQ HB9 8  
HB9 CAK C6  C 0 1 Y N N 21.136 -3.857 -19.402 4.922   -1.414 -0.298 CAK HB9 9  
HB9 CAJ C7  C 0 1 Y N N 20.488 -2.668 -19.720 3.925   -0.748 -0.997 CAJ HB9 10 
HB9 CAL C8  C 0 1 Y N N 22.423 -4.035 -19.888 4.697   -2.702 0.175  CAL HB9 11 
HB9 FAP F1  F 0 1 N N N 23.003 -5.079 -19.606 5.669   -3.352 0.852  FAP HB9 12 
HB9 CAM C9  C 0 1 Y N N 23.055 -3.072 -20.675 3.478   -3.318 -0.045 CAM HB9 13 
HB9 CAN C10 C 0 1 Y N N 22.393 -1.894 -20.981 2.480   -2.655 -0.737 CAN HB9 14 
HB9 FAO F2  F 0 1 N N N 22.992 -0.997 -21.745 1.291   -3.259 -0.951 FAO HB9 15 
HB9 CAI C11 C 0 1 Y N N 21.078 -1.704 -20.513 2.703   -1.368 -1.217 CAI HB9 16 
HB9 NAH N2  N 0 1 N N N 20.401 -0.562 -20.743 1.695   -0.700 -1.921 NAH HB9 17 
HB9 CAW C12 C 0 1 Y N N 20.248 0.063  -21.939 0.603   -0.175 -1.242 CAW HB9 18 
HB9 CAX C13 C 0 1 Y N N 19.541 1.277  -21.907 -0.344  0.573  -1.922 CAX HB9 19 
HB9 CAV C14 C 0 1 Y N N 20.738 -0.389 -23.187 0.454   -0.406 0.125  CAV HB9 20 
HB9 CAA C15 C 0 1 Y N N 20.513 0.361  -24.330 -0.627  0.106  0.772  CAA HB9 21 
HB9 CBG C16 C 0 1 Y N N 19.796 1.554  -24.298 -1.591  0.869  0.081  CBG HB9 22 
HB9 CBF C17 C 0 1 N N N 19.662 2.233  -25.529 -2.730  1.347  0.877  CBF HB9 23 
HB9 OBE O2  O 0 1 N N N 19.666 1.647  -26.600 -2.527  1.810  1.983  OBE HB9 24 
HB9 CBI C18 C 0 1 Y N N 19.295 2.020  -23.072 -1.442  1.113  -1.276 CBI HB9 25 
HB9 CBJ C19 C 0 1 N N N 18.519 3.210  -22.819 -2.334  1.938  -2.168 CBJ HB9 26 
HB9 CBK C20 C 0 1 N N N 17.594 3.633  -24.007 -3.341  2.794  -1.450 CBK HB9 27 
HB9 CBL C21 C 0 1 Y N N 18.469 4.277  -24.866 -4.408  1.997  -0.765 CBL HB9 28 
HB9 CAT C22 C 0 1 Y N N 18.372 5.675  -24.925 -5.697  1.982  -1.275 CAT HB9 29 
HB9 CAU C23 C 0 1 Y N N 19.254 6.379  -25.726 -6.675  1.236  -0.648 CAU HB9 30 
HB9 CBM C24 C 0 1 Y N N 19.463 3.608  -25.561 -4.113  1.277  0.368  CBM HB9 31 
HB9 CAZ C25 C 0 1 Y N N 20.364 4.312  -26.328 -5.084  0.513  1.009  CAZ HB9 32 
HB9 CAY C26 C 0 1 Y N N 20.252 5.695  -26.425 -6.378  0.494  0.498  CAY HB9 33 
HB9 CAB C27 C 0 1 N N N 21.171 6.388  -27.203 -7.430  -0.308 1.158  CAB HB9 34 
HB9 OAD O3  O 0 1 N N N 21.621 5.927  -28.246 -7.168  -0.952 2.155  OAD HB9 35 
HB9 NAC N3  N 0 1 N N N 21.645 7.528  -26.672 -8.681  -0.323 0.655  NAC HB9 36 
HB9 CAE C28 C 0 1 N N N 22.677 8.281  -27.369 -9.724  -1.117 1.310  CAE HB9 37 
HB9 CAF C29 C 0 1 N N N 22.483 9.755  -27.074 -11.039 -0.961 0.544  CAF HB9 38 
HB9 OAG O4  O 0 1 N N N 21.379 10.209 -27.878 -10.899 -1.524 -0.762 OAG HB9 39 
HB9 H1  H1  H 0 1 N N N 20.216 -6.047 -16.221 6.874   3.237  0.655  H1  HB9 40 
HB9 H2  H2  H 0 1 N N N 19.095 -8.092 -15.241 9.288   3.853  1.187  H2  HB9 41 
HB9 H3  H3  H 0 1 N N N 17.239 -9.036 -16.746 10.889  1.894  1.194  H3  HB9 42 
HB9 H6  H6  H 0 1 N N N 21.293 -5.416 -18.089 6.971   -1.317 -0.069 H6  HB9 43 
HB9 H7  H7  H 0 1 N N N 19.494 -2.494 -19.335 4.099   0.250  -1.368 H7  HB9 44 
HB9 H8  H8  H 0 1 N N N 24.055 -3.244 -21.044 3.305   -4.319 0.323  H8  HB9 45 
HB9 H9  H9  H 0 1 N N N 19.967 -0.131 -19.952 1.759   -0.603 -2.884 H9  HB9 46 
HB9 H10 H10 H 0 1 N N N 19.177 1.648  -20.960 -0.221  0.740  -2.982 H10 HB9 47 
HB9 H11 H11 H 0 1 N N N 21.287 -1.317 -23.249 1.190   -0.986 0.664  H11 HB9 48 
HB9 H12 H12 H 0 1 N N N 20.905 0.010  -25.273 -0.750  -0.074 1.830  H12 HB9 49 
HB9 H13 H13 H 0 1 N N N 17.887 3.030  -21.937 -1.704  2.587  -2.777 H13 HB9 50 
HB9 H14 H14 H 0 1 N N N 19.213 4.037  -22.610 -2.871  1.264  -2.835 H14 HB9 51 
HB9 H15 H15 H 0 1 N N N 17.142 2.754  -24.489 -2.821  3.397  -0.705 H15 HB9 52 
HB9 H16 H16 H 0 1 N N N 16.800 4.314  -23.667 -3.812  3.462  -2.171 H16 HB9 53 
HB9 H17 H17 H 0 1 N N N 17.618 6.195  -24.353 -5.935  2.553  -2.161 H17 HB9 54 
HB9 H18 H18 H 0 1 N N N 19.171 7.453  -25.810 -7.679  1.226  -1.046 H18 HB9 55 
HB9 H19 H19 H 0 1 N N N 21.153 3.793  -26.851 -4.839  -0.058 1.892  H19 HB9 56 
HB9 H20 H20 H 0 1 N N N 21.289 7.859  -25.798 -8.890  0.191  -0.140 H20 HB9 57 
HB9 H21 H21 H 0 1 N N N 23.669 7.961  -27.019 -9.430  -2.167 1.318  H21 HB9 58 
HB9 H22 H22 H 0 1 N N N 22.596 8.106  -28.452 -9.856  -0.769 2.334  H22 HB9 59 
HB9 H23 H23 H 0 1 N N N 22.257 9.899  -26.007 -11.835 -1.479 1.080  H23 HB9 60 
HB9 H24 H24 H 0 1 N N N 23.394 10.314 -27.334 -11.287 0.097  0.459  H24 HB9 61 
HB9 H25 H25 H 0 1 N N N 21.229 11.133 -27.718 -11.697 -1.461 -1.305 H25 HB9 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HB9 CBB CBC SING Y N 1  
HB9 CBB CAS DOUB Y N 2  
HB9 CBC CBD DOUB Y N 3  
HB9 CBD SBH SING Y N 4  
HB9 SBH CAS SING Y N 5  
HB9 CAS CAR SING N N 6  
HB9 CAR OBA DOUB N N 7  
HB9 CAR NAQ SING N N 8  
HB9 NAQ CAK SING N N 9  
HB9 CAK CAJ DOUB Y N 10 
HB9 CAK CAL SING Y N 11 
HB9 CAJ CAI SING Y N 12 
HB9 CAL FAP SING N N 13 
HB9 CAL CAM DOUB Y N 14 
HB9 CAM CAN SING Y N 15 
HB9 CAN FAO SING N N 16 
HB9 CAN CAI DOUB Y N 17 
HB9 CAI NAH SING N N 18 
HB9 NAH CAW SING N N 19 
HB9 CAW CAX DOUB Y N 20 
HB9 CAW CAV SING Y N 21 
HB9 CAX CBI SING Y N 22 
HB9 CAV CAA DOUB Y N 23 
HB9 CAA CBG SING Y N 24 
HB9 CBG CBF SING N N 25 
HB9 CBG CBI DOUB Y N 26 
HB9 CBF OBE DOUB N N 27 
HB9 CBF CBM SING N N 28 
HB9 CBI CBJ SING N N 29 
HB9 CBJ CBK SING N N 30 
HB9 CBK CBL SING N N 31 
HB9 CBL CAT DOUB Y N 32 
HB9 CBL CBM SING Y N 33 
HB9 CAT CAU SING Y N 34 
HB9 CAU CAY DOUB Y N 35 
HB9 CBM CAZ DOUB Y N 36 
HB9 CAZ CAY SING Y N 37 
HB9 CAY CAB SING N N 38 
HB9 CAB OAD DOUB N N 39 
HB9 CAB NAC SING N N 40 
HB9 NAC CAE SING N N 41 
HB9 CAE CAF SING N N 42 
HB9 CAF OAG SING N N 43 
HB9 CBB H1  SING N N 44 
HB9 CBC H2  SING N N 45 
HB9 CBD H3  SING N N 46 
HB9 NAQ H6  SING N N 47 
HB9 CAJ H7  SING N N 48 
HB9 CAM H8  SING N N 49 
HB9 NAH H9  SING N N 50 
HB9 CAX H10 SING N N 51 
HB9 CAV H11 SING N N 52 
HB9 CAA H12 SING N N 53 
HB9 CBJ H13 SING N N 54 
HB9 CBJ H14 SING N N 55 
HB9 CBK H15 SING N N 56 
HB9 CBK H16 SING N N 57 
HB9 CAT H17 SING N N 58 
HB9 CAU H18 SING N N 59 
HB9 CAZ H19 SING N N 60 
HB9 NAC H20 SING N N 61 
HB9 CAE H21 SING N N 62 
HB9 CAE H22 SING N N 63 
HB9 CAF H23 SING N N 64 
HB9 CAF H24 SING N N 65 
HB9 OAG H25 SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HB9 InChI            InChI                1.03  "InChI=1S/C29H23F2N3O4S/c30-22-14-23(31)25(34-29(38)26-2-1-11-39-26)15-24(22)33-19-7-8-20-17(12-19)5-3-16-4-6-18(13-21(16)27(20)36)28(37)32-9-10-35/h1-2,4,6-8,11-15,33,35H,3,5,9-10H2,(H,32,37)(H,34,38)" 
HB9 InChIKey         InChI                1.03  ZBPQDEQSQUZYHD-UHFFFAOYSA-N                                                                                                                                                                                
HB9 SMILES_CANONICAL CACTVS               3.385 "OCCNC(=O)c1ccc2CCc3cc(Nc4cc(NC(=O)c5sccc5)c(F)cc4F)ccc3C(=O)c2c1"                                                                                                                                         
HB9 SMILES           CACTVS               3.385 "OCCNC(=O)c1ccc2CCc3cc(Nc4cc(NC(=O)c5sccc5)c(F)cc4F)ccc3C(=O)c2c1"                                                                                                                                         
HB9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(sc1)C(=O)Nc2cc(c(cc2F)F)Nc3ccc4c(c3)CCc5ccc(cc5C4=O)C(=O)NCCO"                                                                                                                                       
HB9 SMILES           "OpenEye OEToolkits" 2.0.6 "c1cc(sc1)C(=O)Nc2cc(c(cc2F)F)Nc3ccc4c(c3)CCc5ccc(cc5C4=O)C(=O)NCCO"                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HB9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[2,4-bis(fluoranyl)-5-[[14-(2-hydroxyethylcarbamoyl)-2-oxidanylidene-6-tricyclo[9.4.0.0^{3,8}]pentadeca-1(15),3(8),4,6,11,13-hexaenyl]amino]phenyl]thiophene-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HB9 "Create component" 2017-01-11 RCSB 
HB9 "Initial release"  2017-09-06 RCSB 
# 
