data_V79
# 
_chem_comp.id                                    V79 
_chem_comp.name                                  "copper;trisodium;18-(2-carboxylatoethyl)-20-(carboxylatomethyl)-12-ethenyl-7-ethyl-3,8,13,17-tetramethyl-17,18-dihydroporphyrin-21,23-diide-2-carboxylate " 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C34 H34 Cu N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2023-07-09 
_chem_comp.pdbx_modified_date                    2023-12-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        658.203 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V79 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7YNF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V79 C14 C1  C  0 1 Y N N N N N 172.070 179.053 153.716 1.923  2.979  -2.200 C14 V79 1  
V79 C18 C2  C  0 1 N N N N N N 171.986 175.814 153.915 4.070  2.352  -4.415 C18 V79 2  
V79 C24 C3  C  0 1 N N N N N N 168.355 185.628 157.115 -0.468 -2.909 -1.260 C24 V79 3  
V79 C29 C4  C  0 1 N N N N N N 166.680 185.151 159.139 1.406  -4.706 -1.493 C29 V79 4  
V79 C11 C5  C  0 1 N N N N N N 171.518 182.791 153.881 -0.468 2.033  0.626  C11 V79 5  
V79 C13 C6  C  0 1 Y N N N N N 171.645 180.276 154.055 1.179  2.430  -1.164 C13 V79 6  
V79 C01 C7  C  0 1 N N N N N N 173.045 183.953 151.961 -2.660 3.237  0.790  C01 V79 7  
V79 C02 C8  C  0 1 N N S N N N 172.039 183.948 153.117 -1.676 2.303  1.498  C02 V79 8  
V79 C03 C9  C  0 1 N N R N N N 171.498 184.928 153.596 -2.287 0.886  1.669  C03 V79 9  
V79 C04 C10 C  0 1 N N N N N N 171.814 186.429 153.010 -3.704 0.827  1.094  C04 V79 10 
V79 C05 C11 C  0 1 N N N N N N 172.900 187.149 153.711 -4.673 1.521  2.054  C05 V79 11 
V79 C06 C12 C  0 1 N N N N N N 172.951 188.535 153.340 -6.038 1.596  1.422  C06 V79 12 
V79 O07 O1  O  0 1 N N N N N N 173.086 188.845 152.095 -6.219 1.141  0.317  O07 V79 13 
V79 O08 O2  O  0 1 N N N N N N 172.422 189.408 154.145 -7.055 2.168  2.087  O08 V79 14 
V79 C09 C13 C  0 1 N N N N N N 170.671 184.450 154.616 -1.347 0.047  0.862  C09 V79 15 
V79 N10 N1  N  1 1 N N R N N N 170.777 183.116 154.687 -0.248 0.736  0.603  N10 V79 16 
V79 C12 C14 C  0 1 N N N N N N 172.082 181.383 153.431 0.185  2.864  -0.274 C12 V79 17 
V79 C15 C15 C  0 1 N N N N N N 173.143 178.674 152.530 1.458  4.018  -3.188 C15 V79 18 
V79 C16 C16 C  0 1 Y N N N N N 171.307 178.114 154.695 3.199  2.383  -2.148 C16 V79 19 
V79 C17 C17 C  0 1 N N N N N N 171.397 176.470 154.785 4.299  2.529  -3.118 C17 V79 20 
V79 C19 C18 C  0 1 Y N N N N N 170.519 179.000 155.496 3.192  1.625  -0.978 C19 V79 21 
V79 N20 N2  N  0 1 Y N N N N N 170.716 180.236 155.119 1.859  1.305  -0.774 N20 V79 22 
V79 N22 N3  N  0 1 N N S N N N 168.934 183.491 156.749 0.737  -1.251 -0.356 N22 V79 23 
V79 C23 C19 C  0 1 N N N N N N 169.133 184.839 156.320 -0.548 -1.709 -0.538 C23 V79 24 
V79 C25 C20 C  0 1 N N N N N N 168.109 187.127 157.193 -1.519 -3.528 -2.084 C25 V79 25 
V79 O26 O3  O  0 1 N N N N N N 167.347 187.654 156.350 -1.346 -4.633 -2.560 O26 V79 26 
V79 O27 O4  O  0 1 N N N N N N 168.812 187.819 157.842 -2.672 -2.869 -2.312 O27 V79 27 
V79 C28 C21 C  0 1 N N N N N N 167.647 184.725 158.072 0.831  -3.394 -1.027 C28 V79 28 
V79 C30 C22 C  0 1 N N N N N N 168.019 183.509 157.813 1.473  -2.421 -0.283 C30 V79 29 
V79 C31 C23 C  0 1 N N N N N N 167.496 182.465 158.575 2.504  -2.552 0.665  C31 V79 30 
V79 C32 C24 C  0 1 N N N N N N 169.872 185.283 155.396 -1.630 -1.119 0.138  C32 V79 31 
V79 C33 C25 C  0 1 N N N N N N 169.434 186.367 154.729 -3.016 -1.707 0.088  C33 V79 32 
V79 C34 C26 C  0 1 N N N N N N 170.045 187.641 155.022 -3.825 -0.999 -0.967 C34 V79 33 
V79 O35 O5  O  0 1 N N N N N N 169.553 188.578 154.664 -3.328 -0.107 -1.613 O35 V79 34 
V79 O36 O6  O  0 1 N N N N N N 171.026 187.731 156.121 -5.099 -1.358 -1.190 O36 V79 35 
V79 N37 N4  N  1 1 N N S N N N 168.905 180.762 157.158 2.397  -0.170 0.973  N37 V79 36 
V79 C38 C27 C  0 1 N N N N N N 167.929 181.159 158.230 2.779  -1.377 1.397  C38 V79 37 
V79 C39 C28 C  0 1 N N N N N N 167.442 180.051 158.930 3.620  -1.163 2.513  C39 V79 38 
V79 C40 C29 C  0 1 N N N N N N 166.411 180.066 160.115 3.896  -2.101 3.660  C40 V79 39 
V79 C41 C30 C  0 1 N N N N N N 164.925 179.744 159.625 2.807  -1.942 4.722  C41 V79 40 
V79 C42 C31 C  0 1 N N N N N N 168.043 178.998 158.360 4.127  0.101  2.309  C42 V79 41 
V79 C43 C32 C  0 1 N N N N N N 167.850 177.519 158.761 5.102  0.857  3.175  C43 V79 42 
V79 C44 C33 C  0 1 N N N N N N 168.946 179.553 157.247 3.530  0.527  1.107  C44 V79 43 
V79 C45 C34 C  0 1 N N N N N N 169.632 178.605 156.562 4.070  1.327  0.056  C45 V79 44 
V79 CU1 CU1 CU 0 0 N N S N N N 169.820 181.916 155.949 1.153  0.194  0.078  CU1 V79 45 
V79 H1  H1  H  0 1 N N N N N N 172.451 176.318 153.081 3.077  2.101  -4.758 H1  V79 46 
V79 H2  H2  H  0 1 N N N N N N 172.035 174.738 153.991 4.876  2.459  -5.125 H2  V79 47 
V79 H3  H3  H  0 1 N N N N N N 165.660 185.158 158.728 0.652  -5.253 -2.058 H3  V79 48 
V79 H4  H4  H  0 1 N N N N N N 166.731 184.446 159.982 2.271  -4.518 -2.129 H4  V79 49 
V79 H5  H5  H  0 1 N N N N N N 166.941 186.161 159.489 1.712  -5.296 -0.629 H5  V79 50 
V79 H6  H6  H  0 1 N N N N N N 173.363 182.922 151.746 -3.497 3.454  1.454  H6  V79 51 
V79 H7  H7  H  0 1 N N N N N N 172.573 184.385 151.066 -2.154 4.166  0.528  H7  V79 52 
V79 H8  H8  H  0 1 N N N N N N 173.922 184.556 152.241 -3.030 2.757  -0.115 H8  V79 53 
V79 H9  H9  H  0 1 N N N N N N 172.095 186.331 151.951 -3.725 1.332  0.129  H9  V79 54 
V79 H10 H10 H  0 1 N N N N N N 170.896 187.029 153.092 -4.002 -0.213 0.967  H10 V79 55 
V79 H11 H11 H  0 1 N N N N N N 172.732 187.077 154.796 -4.733 0.953  2.983  H11 V79 56 
V79 H12 H12 H  0 1 N N N N N N 173.861 186.677 153.457 -4.315 2.529  2.267  H12 V79 57 
V79 H13 H13 H  0 1 N N N N N N 172.201 190.194 153.659 -7.913 2.192  1.640  H13 V79 58 
V79 H14 H14 H  0 1 N N N N N N 172.808 181.313 152.634 -0.089 3.908  -0.291 H14 V79 59 
V79 H15 H15 H  0 1 N N N N N N 174.162 178.669 152.945 1.673  5.013  -2.797 H15 V79 60 
V79 H16 H16 H  0 1 N N N N N N 172.907 177.678 152.126 1.980  3.879  -4.134 H16 V79 61 
V79 H17 H17 H  0 1 N N N N N N 173.078 179.421 151.725 0.384  3.914  -3.346 H17 V79 62 
V79 H18 H18 H  0 1 N N N N N N 170.935 175.957 155.616 5.292  2.780  -2.774 H18 V79 63 
V79 H19 H19 H  0 1 N N N N N N 168.674 188.727 157.600 -3.333 -3.316 -2.859 H19 V79 64 
V79 H20 H20 H  0 1 N N N N N N 166.800 182.641 159.382 3.041  -3.476 0.821  H20 V79 65 
V79 H21 H21 H  0 1 N N N N N N 168.358 186.466 154.937 -2.952 -2.768 -0.154 H21 V79 66 
V79 H22 H22 H  0 1 N N N N N N 169.583 186.173 153.657 -3.498 -1.585 1.058  H22 V79 67 
V79 H23 H23 H  0 1 N N N N N N 171.113 188.636 156.395 -5.578 -0.875 -1.877 H23 V79 68 
V79 H24 H24 H  0 1 N N N N N N 166.711 179.310 160.856 3.902  -3.128 3.296  H24 V79 69 
V79 H25 H25 H  0 1 N N N N N N 166.422 181.062 160.582 4.867  -1.864 4.096  H25 V79 70 
V79 H26 H26 H  0 1 N N N N N N 164.241 179.766 160.487 2.801  -0.915 5.086  H26 V79 71 
V79 H27 H27 H  0 1 N N N N N N 164.610 180.498 158.888 1.836  -2.178 4.286  H27 V79 72 
V79 H28 H28 H  0 1 N N N N N N 164.900 178.746 159.162 3.007  -2.620 5.552  H28 V79 73 
V79 H29 H29 H  0 1 N N N N N N 167.136 177.455 159.596 5.372  0.246  4.036  H29 V79 74 
V79 H30 H30 H  0 1 N N N N N N 167.460 176.954 157.901 5.997  1.089  2.598  H30 V79 75 
V79 H31 H31 H  0 1 N N N N N N 168.816 177.094 159.071 4.640  1.783  3.518  H31 V79 76 
V79 H32 H32 H  0 1 N N N N N N 169.515 177.561 156.813 5.092  1.676  0.063  H32 V79 77 
V79 H33 H33 H  0 1 N N N N N N 172.865 184.052 153.836 -1.375 2.717  2.460  H33 V79 78 
V79 H34 H34 H  0 1 N N N N N N 172.324 185.034 154.314 -2.280 0.582  2.716  H34 V79 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V79 C01 C02 SING N N 1  
V79 O07 C06 DOUB N N 2  
V79 C15 C14 SING N N 3  
V79 C04 C03 SING N N 4  
V79 C04 C05 SING N N 5  
V79 C02 C03 SING N N 6  
V79 C02 C11 SING N N 7  
V79 C06 C05 SING N N 8  
V79 C06 O08 SING N N 9  
V79 C12 C11 DOUB N N 10 
V79 C12 C13 SING N N 11 
V79 C03 C09 SING N N 12 
V79 C14 C13 DOUB Y N 13 
V79 C14 C16 SING Y N 14 
V79 C11 N10 SING N N 15 
V79 C18 C17 DOUB N N 16 
V79 C13 N20 SING Y N 17 
V79 C09 N10 DOUB N N 18 
V79 C09 C32 SING N N 19 
V79 O35 C34 DOUB N N 20 
V79 N10 CU1 SING N N 21 
V79 C16 C17 SING N N 22 
V79 C16 C19 DOUB Y N 23 
V79 C33 C34 SING N N 24 
V79 C33 C32 SING N N 25 
V79 C34 O36 SING N N 26 
V79 N20 C19 SING Y N 27 
V79 N20 CU1 SING N N 28 
V79 C32 C23 DOUB N N 29 
V79 C19 C45 SING N N 30 
V79 CU1 N22 SING N N 31 
V79 CU1 N37 SING N N 32 
V79 C23 N22 SING N N 33 
V79 C23 C24 SING N N 34 
V79 O26 C25 DOUB N N 35 
V79 C45 C44 DOUB N N 36 
V79 N22 C30 SING N N 37 
V79 C24 C25 SING N N 38 
V79 C24 C28 DOUB N N 39 
V79 N37 C44 SING N N 40 
V79 N37 C38 DOUB N N 41 
V79 C25 O27 SING N N 42 
V79 C44 C42 SING N N 43 
V79 C30 C28 SING N N 44 
V79 C30 C31 DOUB N N 45 
V79 C28 C29 SING N N 46 
V79 C38 C31 SING N N 47 
V79 C38 C39 SING N N 48 
V79 C42 C43 SING N N 49 
V79 C42 C39 DOUB N N 50 
V79 C39 C40 SING N N 51 
V79 C41 C40 SING N N 52 
V79 C18 H1  SING N N 53 
V79 C18 H2  SING N N 54 
V79 C29 H3  SING N N 55 
V79 C29 H4  SING N N 56 
V79 C29 H5  SING N N 57 
V79 C01 H6  SING N N 58 
V79 C01 H7  SING N N 59 
V79 C01 H8  SING N N 60 
V79 C04 H9  SING N N 61 
V79 C04 H10 SING N N 62 
V79 C05 H11 SING N N 63 
V79 C05 H12 SING N N 64 
V79 O08 H13 SING N N 65 
V79 C12 H14 SING N N 66 
V79 C15 H15 SING N N 67 
V79 C15 H16 SING N N 68 
V79 C15 H17 SING N N 69 
V79 C17 H18 SING N N 70 
V79 O27 H19 SING N N 71 
V79 C31 H20 SING N N 72 
V79 C33 H21 SING N N 73 
V79 C33 H22 SING N N 74 
V79 O36 H23 SING N N 75 
V79 C40 H24 SING N N 76 
V79 C40 H25 SING N N 77 
V79 C41 H26 SING N N 78 
V79 C41 H27 SING N N 79 
V79 C41 H28 SING N N 80 
V79 C43 H29 SING N N 81 
V79 C43 H30 SING N N 82 
V79 C43 H31 SING N N 83 
V79 C45 H32 SING N N 84 
V79 C02 H33 SING N N 85 
V79 C03 H34 SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V79 InChI            InChI                1.06  "InChI=1S/C34H36N4O6.Cu/c1-7-19-15(3)23-12-25-17(5)21(9-10-29(39)40)32(37-25)22(11-30(41)42)33-31(34(43)44)18(6)26(38-33)14-28-20(8-2)16(4)24(36-28)13-27(19)35-23;/h7,12-14,17,21H,1,8-11H2,2-6H3,(H5,35,36,37,38,39,40,41,42,43,44);/q;+4/p-2/t17-,21+;/m0./s1" 
V79 InChIKey         InChI                1.06  YJPOIBSDHKWDGX-CQVJSGDESA-L                                                                                                                                                                                                                                       
V79 SMILES_CANONICAL CACTVS               3.385 "CCC1=C(C)C2=Cc3n4c(C=C5[C@@H](C)[C@@H](CCC(O)=O)C6=[N@+]5[Cu@@]47[N@]8C(=CC1=[N@@+]27)C(=C(C(O)=O)C8=C6CC(O)=O)C)c(C)c3C=C"                                                                                                                                      
V79 SMILES           CACTVS               3.385 "CCC1=C(C)C2=Cc3n4c(C=C5[CH](C)[CH](CCC(O)=O)C6=[N+]5[Cu]47[N]8C(=CC1=[N+]27)C(=C(C(O)=O)C8=C6CC(O)=O)C)c(C)c3C=C"                                                                                                                                                
V79 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=C(c2cc3c(c(c4n3[Cu]56[n+]2c1cc7n5c(c(c8[n+]6c(c4)C(C8CCC(=O)O)C)CC(=O)O)c(c7C)C(=O)O)C)C=C)C"                                                                                                                                                               
V79 SMILES           "OpenEye OEToolkits" 2.0.7 "CCC1=C(c2cc3c(c(c4n3[Cu]56[n+]2c1cc7n5c(c(c8[n+]6c(c4)C(C8CCC(=O)O)C)CC(=O)O)c(c7C)C(=O)O)C)C=C)C"                                                                                                                                                               
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V79 "Create component"   2023-07-09 PDBJ 
V79 "Modify coordinates" 2023-11-27 PDBJ 
V79 "Initial release"    2023-12-06 RCSB 
# 
