data_7FA
# 
_chem_comp.id                                    7FA 
_chem_comp.name                                  "methyl (R)-(6Z,9Z,12Z)-octadeca-6,9,12-trien-1-ylphosphonofluoridate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H34 F O2 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-09-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        344.444 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7FA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3TJM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7FA C1  C1  C 0 1 N N N N N N 3.621  66.157 47.773 -4.988 -0.003 -0.734 C1  7FA 1  
7FA P1  P1  P 0 1 N N R N N N 3.259  66.318 46.027 -6.320 -1.053 -0.067 P1  7FA 2  
7FA C2  C2  C 0 1 N N N N N N 4.158  64.825 48.174 -4.081 0.458  0.409  C2  7FA 3  
7FA O2  O1  O 0 1 N N N N N N 2.604  67.719 45.696 -7.275 -1.538 -1.269 O2  7FA 4  
7FA C3  C3  C 0 1 N N N N N N 4.212  64.727 49.684 -2.962 1.339  -0.152 C3  7FA 5  
7FA C4  C4  C 0 1 N N N N N N 2.821  64.640 50.260 -2.055 1.799  0.991  C4  7FA 6  
7FA C5  C5  C 0 1 N N N N N N 2.843  64.371 51.736 -0.937 2.680  0.431  C5  7FA 7  
7FA C6  C6  C 0 1 N N N N N N 2.728  65.672 52.488 -0.043 3.134  1.557  C6  7FA 8  
7FA C7  C7  C 0 1 N N N N N N 2.281  65.781 53.755 1.252  2.954  1.479  C7  7FA 9  
7FA C8  C8  C 0 1 N N N N N N 1.828  64.626 54.602 1.866  2.443  0.200  C8  7FA 10 
7FA C9  C9  C 0 1 N N N N N N 0.786  65.132 55.563 2.963  3.378  -0.239 C9  7FA 11 
7FA CM  C10 C 0 1 N N N N N N 1.190  67.927 45.702 -8.414 -2.376 -1.069 CM  7FA 12 
7FA C10 C11 C 0 1 N N N N N N 0.262  64.401 56.562 4.156  2.909  -0.506 C10 7FA 13 
7FA C11 C12 C 0 1 N N N N N N 0.660  62.985 56.838 4.392  1.421  -0.532 C11 7FA 14 
7FA C12 C13 C 0 1 N N N N N N 0.563  62.736 58.313 5.024  1.036  -1.844 C12 7FA 15 
7FA C13 C14 C 0 1 N N N N N N 0.619  61.489 58.803 6.135  0.341  -1.857 C13 7FA 16 
7FA C14 C15 C 0 1 N N N N N N 1.942  60.801 58.981 6.687  -0.222 -0.573 C14 7FA 17 
7FA C15 C16 C 0 1 N N N N N N 1.786  59.320 58.831 6.930  -1.724 -0.738 C15 7FA 18 
7FA C16 C17 C 0 1 N N N N N N 1.658  59.002 57.373 7.490  -2.296 0.566  C16 7FA 19 
7FA C17 C18 C 0 1 N N N N N N 0.334  58.340 57.169 7.734  -3.797 0.401  C17 7FA 20 
7FA C18 C19 C 0 1 N N N N N N 0.554  57.180 56.257 8.294  -4.369 1.705  C18 7FA 21 
7FA O1  O2  O 0 1 N N N N N N 2.410  65.064 45.545 -7.115 -0.278 0.912  O1  7FA 22 
7FA F1  F1  F 0 1 N Y N N N N 4.697  66.129 45.227 -5.654 -2.386 0.687  F1  7FA 23 
7FA H1  H1  H 0 1 N N N N N N 4.365  66.922 48.041 -4.402 -0.574 -1.455 H1  7FA 24 
7FA H2  H2  H 0 1 N N N N N N 2.692  66.336 48.334 -5.422 0.867  -1.226 H2  7FA 25 
7FA H3  H3  H 0 1 N N N N N N 3.503  64.034 47.780 -4.666 1.028  1.130  H3  7FA 26 
7FA H4  H4  H 0 1 N N N N N N 5.171  64.701 47.764 -3.646 -0.412 0.901  H4  7FA 27 
7FA H5  H5  H 0 1 N N N N N N 4.778  63.827 49.968 -2.377 0.768  -0.873 H5  7FA 28 
7FA H6  H6  H 0 1 N N N N N N 4.715  65.619 50.086 -3.397 2.209  -0.644 H6  7FA 29 
7FA H7  H7  H 0 1 N N N N N N 2.301  65.592 50.080 -2.640 2.370  1.712  H7  7FA 30 
7FA H8  H8  H 0 1 N N N N N N 2.278  63.825 49.758 -1.620 0.929  1.483  H8  7FA 31 
7FA H9  H9  H 0 1 N N N N N N 1.998  63.718 52.002 -0.351 2.110  -0.290 H9  7FA 32 
7FA H10 H10 H 0 1 N N N N N N 3.788  63.875 52.004 -1.371 3.550  -0.061 H10 7FA 33 
7FA H11 H11 H 0 1 N N N N N N 3.023  66.577 51.978 -0.471 3.608  2.428  H11 7FA 34 
7FA H12 H12 H 0 1 N N N N N N 2.246  66.768 54.192 1.880  3.171  2.330  H12 7FA 35 
7FA H13 H13 H 0 1 N N N N N N 1.396  63.842 53.963 2.281  1.449  0.368  H13 7FA 36 
7FA H14 H14 H 0 1 N N N N N N 2.682  64.215 55.160 1.101  2.391  -0.574 H14 7FA 37 
7FA H15 H15 H 0 1 N N N N N N 0.437  66.147 55.442 2.764  4.436  -0.334 H15 7FA 38 
7FA H16 H16 H 0 1 N N N N N N 0.972  68.974 45.443 -9.117 -1.881 -0.399 H16 7FA 39 
7FA H17 H17 H 0 1 N N N N N N 0.718  67.261 44.964 -8.898 -2.567 -2.027 H17 7FA 40 
7FA H18 H18 H 0 1 N N N N N N 0.791  67.706 46.703 -8.097 -3.321 -0.628 H18 7FA 41 
7FA H19 H19 H 0 1 N N N N N N -0.483 64.858 57.197 4.971  3.589  -0.707 H19 7FA 42 
7FA H20 H20 H 0 1 N N N N N N -0.014 62.300 56.302 5.056  1.144  0.287  H20 7FA 43 
7FA H21 H21 H 0 1 N N N N N N 1.694  62.819 56.502 3.441  0.900  -0.420 H21 7FA 44 
7FA H22 H22 H 0 1 N N N N N N 0.447  63.570 58.989 4.562  1.332  -2.774 H22 7FA 45 
7FA H24 H24 H 0 1 N N N N N N -0.293 60.976 59.071 6.656  0.172  -2.789 H24 7FA 46 
7FA H26 H26 H 0 1 N N N N N N 2.647  61.170 58.221 7.627  0.274  -0.333 H26 7FA 47 
7FA H27 H27 H 0 1 N N N N N N 2.334  61.024 59.984 5.972  -0.057 0.233  H27 7FA 48 
7FA H28 H28 H 0 1 N N N N N N 0.884  58.986 59.364 5.990  -2.220 -0.979 H28 7FA 49 
7FA H29 H29 H 0 1 N N N N N N 2.668  58.810 59.246 7.645  -1.889 -1.544 H29 7FA 50 
7FA H30 H30 H 0 1 N N N N N N 2.468  58.324 57.065 8.430  -1.799 0.806  H30 7FA 51 
7FA H31 H31 H 0 1 N N N N N N 1.709  59.928 56.781 6.775  -2.130 1.372  H31 7FA 52 
7FA H32 H32 H 0 1 N N N N N N -0.375 59.048 56.714 6.794  -4.294 0.160  H32 7FA 53 
7FA H33 H33 H 0 1 N N N N N N -0.065 57.991 58.133 8.449  -3.963 -0.405 H33 7FA 54 
7FA H34 H34 H 0 1 N N N N N N -0.402 56.664 56.082 9.234  -3.873 1.945  H34 7FA 55 
7FA H35 H35 H 0 1 N N N N N N 0.958  57.539 55.299 7.579  -4.204 2.511  H35 7FA 56 
7FA H36 H36 H 0 1 N N N N N N 1.268  56.482 56.718 8.467  -5.439 1.587  H36 7FA 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7FA O1  P1  DOUB N N 1  
7FA O2  CM  SING N N 2  
7FA O2  P1  SING N N 3  
7FA P1  C1  SING N N 4  
7FA C1  C2  SING N N 5  
7FA C2  C3  SING N N 6  
7FA C3  C4  SING N N 7  
7FA C4  C5  SING N N 8  
7FA C5  C6  SING N N 9  
7FA C6  C7  DOUB N Z 10 
7FA C7  C8  SING N N 11 
7FA C8  C9  SING N N 12 
7FA C9  C10 DOUB N Z 13 
7FA C18 C17 SING N N 14 
7FA C10 C11 SING N N 15 
7FA C11 C12 SING N N 16 
7FA C17 C16 SING N N 17 
7FA C16 C15 SING N N 18 
7FA C12 C13 DOUB N Z 19 
7FA C13 C14 SING N N 20 
7FA C15 C14 SING N N 21 
7FA P1  F1  SING N N 22 
7FA C1  H1  SING N N 23 
7FA C1  H2  SING N N 24 
7FA C2  H3  SING N N 25 
7FA C2  H4  SING N N 26 
7FA C3  H5  SING N N 27 
7FA C3  H6  SING N N 28 
7FA C4  H7  SING N N 29 
7FA C4  H8  SING N N 30 
7FA C5  H9  SING N N 31 
7FA C5  H10 SING N N 32 
7FA C6  H11 SING N N 33 
7FA C7  H12 SING N N 34 
7FA C8  H13 SING N N 35 
7FA C8  H14 SING N N 36 
7FA C9  H15 SING N N 37 
7FA CM  H16 SING N N 38 
7FA CM  H17 SING N N 39 
7FA CM  H18 SING N N 40 
7FA C10 H19 SING N N 41 
7FA C11 H20 SING N N 42 
7FA C11 H21 SING N N 43 
7FA C12 H22 SING N N 44 
7FA C13 H24 SING N N 45 
7FA C14 H26 SING N N 46 
7FA C14 H27 SING N N 47 
7FA C15 H28 SING N N 48 
7FA C15 H29 SING N N 49 
7FA C16 H30 SING N N 50 
7FA C16 H31 SING N N 51 
7FA C17 H32 SING N N 52 
7FA C17 H33 SING N N 53 
7FA C18 H34 SING N N 54 
7FA C18 H35 SING N N 55 
7FA C18 H36 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7FA SMILES           ACDLabs              12.01 "C(CCCC\C=C/C\C=C/C\C=C/CCCCC)P(F)(OC)=O"                                                                                                                  
7FA InChI            InChI                1.03  "InChI=1S/C19H34FO2P/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-23(20,21)22-2/h7-8,10-11,13-14H,3-6,9,12,15-19H2,1-2H3/b8-7?,11-10-,14-13-/t23-/m1/s1" 
7FA InChIKey         InChI                1.03  PYIHGLSRUVHCML-YMLCEXCJSA-N                                                                                                                                
7FA SMILES_CANONICAL CACTVS               3.385 "CCCCC\C=C/C/C=C\C\C=C/CCCCC[P@@](F)(=O)OC"                                                                                                                
7FA SMILES           CACTVS               3.385 "CCCCCC=CCC=CCC=CCCCCC[P](F)(=O)OC"                                                                                                                        
7FA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CCCCCC=CC/C=C\C/C=C\CCCCC[P@@](=O)(OC)F"                                                                                                                  
7FA SMILES           "OpenEye OEToolkits" 2.0.4 "CCCCCC=CCC=CCC=CCCCCCP(=O)(OC)F"                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7FA "SYSTEMATIC NAME" ACDLabs              12.01 "methyl (R)-(6Z,9Z,12Z)-octadeca-6,9,12-trien-1-ylphosphonofluoridate" 
7FA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(6~{Z},9~{Z})-1-[fluoranyl(methoxy)phosphoryl]octadeca-6,9,12-triene" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7FA "Create component"   2011-09-14 RCSB 
7FA "Modify formula"     2011-09-14 RCSB 
7FA "Other modification" 2016-03-28 RCSB 
7FA "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            7FA 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
