data_CNA
# 
_chem_comp.id                                    CNA 
_chem_comp.name                                  CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H30 N7 O13 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2013-06-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        662.460 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CNA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4G1C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CNA PA    PA    P 0 1 N N N 19.514 7.854  19.118 1.531   2.978  -0.521 PA    CNA 1  
CNA O1A   O1A   O 0 1 N N N 20.042 7.208  20.445 1.343   4.482  0.022  O1A   CNA 2  
CNA O2A   O2A   O 0 1 N N N 20.523 8.343  18.137 1.886   3.013  -1.958 O2A   CNA 3  
CNA O5B   O5B   O 0 1 N N N 18.348 6.985  18.355 2.708   2.252  0.304  O5B   CNA 4  
CNA C5B   C5B   C 0 1 N N N 17.791 5.754  18.804 4.071   2.676  0.251  C5B   CNA 5  
CNA C4B   C4B   C 0 1 N N R 17.845 4.777  17.628 4.921   1.775  1.149  C4B   CNA 6  
CNA O4B   O4B   O 0 1 N N N 17.693 3.464  18.197 4.952   0.441  0.613  O4B   CNA 7  
CNA C3B   C3B   C 0 1 N N S 16.697 4.997  16.582 6.374   2.288  1.183  C3B   CNA 8  
CNA O3B   O3B   O 0 1 N N N 17.261 4.920  15.282 6.754   2.624  2.519  O3B   CNA 9  
CNA C2B   C2B   C 0 1 N N R 15.697 3.873  16.948 7.211   1.093  0.665  C2B   CNA 10 
CNA O2B   O2B   O 0 1 N N N 15.044 3.487  15.740 8.415   0.948  1.422  O2B   CNA 11 
CNA C1B   C1B   C 0 1 N N R 16.720 2.817  17.347 6.256   -0.103 0.911  C1B   CNA 12 
CNA N9A   N9A   N 0 1 Y N N 16.326 1.444  17.839 6.572   -1.210 0.005  N9A   CNA 13 
CNA C8A   C8A   C 0 1 Y N N 15.385 1.323  18.780 5.978   -1.465 -1.195 C8A   CNA 14 
CNA N7A   N7A   N 0 1 Y N N 15.323 0.048  19.165 6.503   -2.527 -1.734 N7A   CNA 15 
CNA C5A   C5A   C 0 1 Y N N 16.280 -0.614 18.522 7.465   -3.019 -0.917 C5A   CNA 16 
CNA C6A   C6A   C 0 1 Y N N 16.638 -1.904 18.567 8.344   -4.114 -0.973 C6A   CNA 17 
CNA N6A   N6A   N 0 1 N N N 15.930 -2.701 19.373 8.335   -4.975 -2.056 N6A   CNA 18 
CNA N1A   N1A   N 0 1 Y N N 17.658 -2.371 17.841 9.184   -4.303 0.039  N1A   CNA 19 
CNA C2A   C2A   C 0 1 Y N N 18.351 -1.489 17.010 9.200   -3.487 1.077  C2A   CNA 20 
CNA N3A   N3A   N 0 1 Y N N 17.967 -0.140 16.983 8.395   -2.450 1.172  N3A   CNA 21 
CNA C4A   C4A   C 0 1 Y N N 16.947 0.268  17.758 7.525   -2.177 0.206  C4A   CNA 22 
CNA O3    O3    O 0 1 N N N 18.638 9.127  19.555 0.157   2.161  -0.328 O3    CNA 23 
CNA PN    PN    P 0 1 N N N 17.572 9.197  20.736 -1.225  2.088  -1.149 PN    CNA 24 
CNA O1N   O1N   O 0 1 N N N 16.553 10.314 20.195 -1.597  3.444  -1.610 O1N   CNA 25 
CNA O2N   O2N   O 0 1 N N N 16.902 7.934  21.166 -1.043  1.120  -2.422 O2N   CNA 26 
CNA O5D   O5D   O 0 1 N N N 18.398 9.929  21.972 -2.386  1.509  -0.195 O5D   CNA 27 
CNA C5D   C5D   C 0 1 N N N 19.134 11.141 21.684 -3.754  1.421  -0.600 C5D   CNA 28 
CNA C4D   C4D   C 0 1 N N R 20.471 11.208 22.462 -4.585  0.828  0.540  C4D   CNA 29 
CNA "C4'" "C4'" C 0 1 N N N 20.237 10.847 23.939 -6.082  0.842  0.166  "C4'" CNA 30 
CNA C3D   C3D   C 0 1 N N R 21.467 10.184 21.924 -4.201  -0.646 0.761  C3D   CNA 31 
CNA O3D   O3D   O 0 1 N N N 22.855 10.585 22.192 -3.746  -0.837 2.102  O3D   CNA 32 
CNA C2D   C2D   C 0 1 N N S 21.162 8.981  22.775 -5.478  -1.475 0.513  C2D   CNA 33 
CNA O2D   O2D   O 0 1 N N N 22.274 8.070  22.693 -5.553  -2.566 1.434  O2D   CNA 34 
CNA C1D   C1D   C 0 1 N N R 20.995 9.553  24.186 -6.635  -0.476 0.762  C1D   CNA 35 
CNA N1N   N1N   N 1 1 Y N N 20.242 8.558  25.022 -7.846  -0.897 0.054  N1N   CNA 36 
CNA C2N   C2N   C 0 1 Y N N 20.950 7.524  25.655 -8.972  -1.014 0.726  C2N   CNA 37 
CNA C3N   C3N   C 0 1 Y N N 20.297 6.560  26.418 -10.145 -1.413 0.084  C3N   CNA 38 
CNA C7N   C7N   C 0 1 N N N 21.052 5.556  27.019 -11.409 -1.544 0.839  C7N   CNA 39 
CNA O7N   O7N   O 0 1 N N N 22.126 5.810  27.552 -11.433 -1.303 2.030  O7N   CNA 40 
CNA N7N   N7N   N 0 1 N N N 20.542 4.326  26.943 -12.535 -1.930 0.207  N7N   CNA 41 
CNA C4N   C4N   C 0 1 Y N N 18.904 6.594  26.540 -10.104 -1.687 -1.289 C4N   CNA 42 
CNA C5N   C5N   C 0 1 Y N N 18.179 7.606  25.907 -8.896  -1.549 -1.949 C5N   CNA 43 
CNA C6N   C6N   C 0 1 Y N N 18.834 8.583  25.144 -7.779  -1.144 -1.241 C6N   CNA 44 
CNA H1    H1    H 0 1 N N N 20.992 7.216  20.445 1.109   4.535  0.959  H1    CNA 45 
CNA H2    H2    H 0 1 N N N 16.748 5.905  19.121 4.432   2.611  -0.776 H2    CNA 46 
CNA H3    H3    H 0 1 N N N 18.377 5.361  19.648 4.145   3.707  0.597  H3    CNA 47 
CNA H4    H4    H 0 1 N N N 18.815 4.871  17.118 4.507   1.760  2.157  H4    CNA 48 
CNA H5    H5    H 0 1 N N N 16.229 5.977  16.758 6.490   3.149  0.524  H5    CNA 49 
CNA H6    H6    H 0 1 N N N 17.858 5.648  15.152 7.677   2.898  2.607  H6    CNA 50 
CNA H7    H7    H 0 1 N N N 15.022 4.154  17.770 7.431   1.203  -0.396 H7    CNA 51 
CNA H8    H8    H 0 1 N N N 14.419 2.795  15.924 9.005   1.712  1.372  H8    CNA 52 
CNA H9    H9    H 0 1 N N N 17.263 2.615  16.412 6.310   -0.431 1.949  H9    CNA 53 
CNA H10   H10   H 0 1 N N N 14.775 2.126  19.166 5.188   -0.874 -1.633 H10   CNA 54 
CNA H11   H11   H 0 1 N N N 16.291 -3.632 19.323 7.717   -4.826 -2.789 H11   CNA 55 
CNA H12   H12   H 0 1 N N N 15.997 -2.368 20.314 8.947   -5.727 -2.083 H12   CNA 56 
CNA H13   H13   H 0 1 N N N 19.169 -1.839 16.398 9.899   -3.677 1.878  H13   CNA 57 
CNA H14   H14   H 0 1 N N N 15.964 8.014  21.041 -0.799  0.212  -2.194 H14   CNA 58 
CNA H15   H15   H 0 1 N N N 19.349 11.178 20.606 -4.126  2.416  -0.841 H15   CNA 59 
CNA H16   H16   H 0 1 N N N 18.516 12.007 21.965 -3.832  0.780  -1.478 H16   CNA 60 
CNA H17   H17   H 0 1 N N N 20.894 12.221 22.387 -4.424  1.398  1.455  H17   CNA 61 
CNA H18   H18   H 0 1 N N N 20.622 11.644 24.592 -6.579  1.702  0.614  H18   CNA 62 
CNA H19   H19   H 0 1 N N N 19.163 10.702 24.130 -6.204  0.852  -0.918 H19   CNA 63 
CNA H20   H20   H 0 1 N N N 21.293 9.980  20.857 -3.423  -0.939 0.057  H20   CNA 64 
CNA H21   H21   H 0 1 N N N 23.447 9.928  21.845 -3.489  -1.747 2.304  H21   CNA 65 
CNA H22   H22   H 0 1 N N N 20.226 8.504  22.447 -5.503  -1.840 -0.514 H22   CNA 66 
CNA H23   H23   H 0 1 N N N 22.096 7.304  23.226 -4.820  -3.192 1.362  H23   CNA 67 
CNA H24   H24   H 0 1 N N N 21.979 9.765  24.629 -6.828  -0.366 1.829  H24   CNA 68 
CNA H25   H25   H 0 1 N N N 22.024 7.475  25.548 -8.989  -0.799 1.785  H25   CNA 69 
CNA H26   H26   H 0 1 N N N 21.042 3.553  27.333 -12.516 -2.122 -0.744 H26   CNA 70 
CNA H27   H27   H 0 1 N N N 19.660 4.177  26.496 -13.364 -2.016 0.702  H27   CNA 71 
CNA H28   H28   H 0 1 N N N 18.392 5.841  27.121 -10.992 -1.998 -1.818 H28   CNA 72 
CNA H29   H29   H 0 1 N N N 17.104 7.636  26.006 -8.827  -1.752 -3.008 H29   CNA 73 
CNA H30   H30   H 0 1 N N N 18.263 9.355  24.649 -6.836  -1.032 -1.755 H30   CNA 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CNA O3B   C3B   SING N N 1  
CNA O2B   C2B   SING N N 2  
CNA C3B   C2B   SING N N 3  
CNA C3B   C4B   SING N N 4  
CNA C2B   C1B   SING N N 5  
CNA N3A   C2A   DOUB Y N 6  
CNA N3A   C4A   SING Y N 7  
CNA C2A   N1A   SING Y N 8  
CNA C1B   N9A   SING N N 9  
CNA C1B   O4B   SING N N 10 
CNA C4B   O4B   SING N N 11 
CNA C4B   C5B   SING N N 12 
CNA C4A   N9A   SING Y N 13 
CNA C4A   C5A   DOUB Y N 14 
CNA N9A   C8A   SING Y N 15 
CNA N1A   C6A   DOUB Y N 16 
CNA O2A   PA    DOUB N N 17 
CNA O5B   C5B   SING N N 18 
CNA O5B   PA    SING N N 19 
CNA C5A   C6A   SING Y N 20 
CNA C5A   N7A   SING Y N 21 
CNA C6A   N6A   SING N N 22 
CNA C8A   N7A   DOUB Y N 23 
CNA PA    O3    SING N N 24 
CNA PA    O1A   SING N N 25 
CNA O3    PN    SING N N 26 
CNA O1N   PN    DOUB N N 27 
CNA PN    O2N   SING N N 28 
CNA PN    O5D   SING N N 29 
CNA C5D   O5D   SING N N 30 
CNA C5D   C4D   SING N N 31 
CNA C3D   O3D   SING N N 32 
CNA C3D   C4D   SING N N 33 
CNA C3D   C2D   SING N N 34 
CNA C4D   "C4'" SING N N 35 
CNA O2D   C2D   SING N N 36 
CNA C2D   C1D   SING N N 37 
CNA "C4'" C1D   SING N N 38 
CNA C1D   N1N   SING N N 39 
CNA N1N   C6N   DOUB Y N 40 
CNA N1N   C2N   SING Y N 41 
CNA C6N   C5N   SING Y N 42 
CNA C2N   C3N   DOUB Y N 43 
CNA C5N   C4N   DOUB Y N 44 
CNA C3N   C4N   SING Y N 45 
CNA C3N   C7N   SING N N 46 
CNA N7N   C7N   SING N N 47 
CNA C7N   O7N   DOUB N N 48 
CNA O1A   H1    SING N N 49 
CNA C5B   H2    SING N N 50 
CNA C5B   H3    SING N N 51 
CNA C4B   H4    SING N N 52 
CNA C3B   H5    SING N N 53 
CNA O3B   H6    SING N N 54 
CNA C2B   H7    SING N N 55 
CNA O2B   H8    SING N N 56 
CNA C1B   H9    SING N N 57 
CNA C8A   H10   SING N N 58 
CNA N6A   H11   SING N N 59 
CNA N6A   H12   SING N N 60 
CNA C2A   H13   SING N N 61 
CNA O2N   H14   SING N N 62 
CNA C5D   H15   SING N N 63 
CNA C5D   H16   SING N N 64 
CNA C4D   H17   SING N N 65 
CNA "C4'" H18   SING N N 66 
CNA "C4'" H19   SING N N 67 
CNA C3D   H20   SING N N 68 
CNA O3D   H21   SING N N 69 
CNA C2D   H22   SING N N 70 
CNA O2D   H23   SING N N 71 
CNA C1D   H24   SING N N 72 
CNA C2N   H25   SING N N 73 
CNA N7N   H26   SING N N 74 
CNA N7N   H27   SING N N 75 
CNA C4N   H28   SING N N 76 
CNA C5N   H29   SING N N 77 
CNA C6N   H30   SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CNA SMILES           ACDLabs              12.01 "O=C(N)c1ccc[n+](c1)C2CC(C(O)C2O)COP(=O)(O)OP(=O)(O)OCC5OC(n4cnc3c(ncnc34)N)C(O)C5O" 
CNA InChI            InChI                1.03  
;InChI=1S/C22H29N7O13P2/c23-19-14-21(26-8-25-19)29(9-27-14)22-18(33)17(32)13(41-22)7-40-44(37,38)42-43(35,36)39-6-11-4-12(16(31)15(11)30)28-3-1-2-10(5-28)20(24)34/h1-3,5,8-9,11-13,15-18,22,30-33H,4,6-7H2,(H5-,23,24,25,26,34,35,36,37,38)/p+1/t11-,12-,13-,15-,16+,17-,18-,22-/m1/s1
;
CNA InChIKey         InChI                1.03  DGPLSUKWXXSBCU-VGXGLJSLSA-O 
CNA SMILES_CANONICAL CACTVS               3.370 "NC(=O)c1ccc[n+](c1)[C@@H]2C[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O" 
CNA SMILES           CACTVS               3.370 "NC(=O)c1ccc[n+](c1)[CH]2C[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O" 
CNA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(c[n+](c1)[C@@H]2C[C@@H]([C@H]([C@H]2O)O)COP(=O)(O)OP(=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)C(=O)N" 
CNA SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(c[n+](c1)C2CC(C(C2O)O)COP(=O)(O)OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)C(=O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CNA "SYSTEMATIC NAME" ACDLabs              12.01 "5'-O-[(S)-{[(S)-{[(1R,2R,3S,4R)-4-(3-carbamoylpyridinium-1-yl)-2,3-dihydroxycyclopentyl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]adenosine" 
CNA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"[[(1R,2R,3S,4R)-4-(3-aminocarbonylpyridin-1-ium-1-yl)-2,3-bis(oxidanyl)cyclopentyl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CNA "Create component"   1999-07-08 RCSB 
CNA "Modify descriptor"  2011-06-04 RCSB 
CNA "Other modification" 2013-06-06 RCSB 
# 
