data_ZIA
# 
_chem_comp.id                                    ZIA 
_chem_comp.name                                  "[(2R)-5-oxopyrrolidin-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H22 N2 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-13 
_chem_comp.pdbx_modified_date                    2023-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        318.323 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZIA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8GFI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZIA C10 C1  C 0 1 N N R -33.610 -62.515 -11.131 -3.062 0.610  -0.644 C10 ZIA 1  
ZIA C9  C2  C 0 1 N N N -34.182 -63.038 -12.444 -1.723 -0.041 -0.997 C9  ZIA 2  
ZIA C4  C3  C 0 1 N N R -32.078 -63.366 -16.910 3.068  0.331  -0.081 C4  ZIA 3  
ZIA C2  C4  C 0 1 N N N -29.676 -63.178 -14.252 0.783  3.207  0.105  C2  ZIA 4  
ZIA N1  N1  N 0 1 N N N -30.730 -62.710 -14.945 1.652  2.304  -0.390 N1  ZIA 5  
ZIA C6  C5  C 0 1 N N R -34.540 -63.827 -16.529 1.957  -1.893 -0.296 C6  ZIA 6  
ZIA C5  C6  C 0 1 N N S -33.303 -64.187 -17.370 3.065  -1.116 0.420  C5  ZIA 7  
ZIA C8  C7  C 0 1 N N R -33.194 -63.198 -14.641 0.629  0.087  -0.552 C8  ZIA 8  
ZIA C11 C8  C 0 1 N N N -32.340 -63.252 -10.668 -4.197 -0.008 -1.490 C11 ZIA 9  
ZIA C1  C9  C 0 1 N N N -28.707 -62.173 -13.691 0.750  4.607  -0.454 C1  ZIA 10 
ZIA O1  O1  O 0 1 N N N -29.506 -64.383 -14.106 0.027  2.894  1.000  O1  ZIA 11 
ZIA C3  C10 C 0 1 N N R -31.869 -63.509 -15.391 1.683  0.944  0.153  C3  ZIA 12 
ZIA O2  O2  O 0 1 N N N -30.898 -63.669 -17.665 4.050  1.084  0.632  O2  ZIA 13 
ZIA O3  O3  O 0 1 N N N -33.658 -63.931 -18.735 4.329  -1.721 0.141  O3  ZIA 14 
ZIA C7  C11 C 0 1 N N N -35.750 -64.687 -16.824 1.908  -3.325 0.243  C7  ZIA 15 
ZIA O4  O4  O 0 1 N N N -36.875 -64.220 -16.102 0.954  -4.082 -0.503 O4  ZIA 16 
ZIA O5  O5  O 0 1 N N N -34.276 -63.993 -15.119 0.701  -1.253 -0.062 O5  ZIA 17 
ZIA O6  O6  O 0 1 N N N -33.090 -63.513 -13.274 -0.671 0.621  -0.292 O6  ZIA 18 
ZIA C12 C12 C 0 1 N N N -31.201 -62.268 -10.949 -4.719 -1.122 -0.553 C12 ZIA 19 
ZIA C13 C13 C 0 1 N N N -31.883 -60.924 -10.919 -4.339 -0.648 0.833  C13 ZIA 20 
ZIA O7  O7  O 0 1 N N N -31.365 -59.835 -10.632 -4.801 -1.082 1.867  O7  ZIA 21 
ZIA N2  N2  N 0 1 N N N -33.172 -61.117 -11.240 -3.415 0.324  0.752  N2  ZIA 22 
ZIA H1  H1  H 0 1 N N N -34.376 -62.604 -10.347 -3.012 1.686  -0.808 H1  ZIA 23 
ZIA H2  H2  H 0 1 N N N -34.716 -62.228 -12.963 -1.745 -1.094 -0.714 H2  ZIA 24 
ZIA H3  H3  H 0 1 N N N -34.878 -63.865 -12.241 -1.550 0.043  -2.070 H3  ZIA 25 
ZIA H4  H4  H 0 1 N N N -32.328 -62.310 -17.091 3.298  0.348  -1.147 H4  ZIA 26 
ZIA H5  H5  H 0 1 N N N -30.734 -61.736 -15.173 2.256  2.555  -1.107 H5  ZIA 27 
ZIA H6  H6  H 0 1 N N N -34.800 -62.777 -16.732 2.161  -1.915 -1.366 H6  ZIA 28 
ZIA H7  H7  H 0 1 N N N -33.081 -65.255 -17.231 2.883  -1.129 1.495  H7  ZIA 29 
ZIA H8  H8  H 0 1 N N N -33.423 -62.130 -14.771 0.815  0.092  -1.626 H8  ZIA 30 
ZIA H9  H9  H 0 1 N N N -32.396 -63.486 -9.595  -4.975 0.726  -1.695 H9  ZIA 31 
ZIA H10 H10 H 0 1 N N N -32.200 -64.182 -11.239 -3.807 -0.429 -2.417 H10 ZIA 32 
ZIA H11 H11 H 0 1 N N N -27.892 -62.699 -13.172 1.442  5.237  0.105  H11 ZIA 33 
ZIA H12 H12 H 0 1 N N N -28.290 -61.569 -14.510 1.044  4.586  -1.503 H12 ZIA 34 
ZIA H13 H13 H 0 1 N N N -29.230 -61.516 -12.981 -0.259 5.009  -0.367 H13 ZIA 35 
ZIA H14 H14 H 0 1 N N N -31.636 -64.567 -15.198 1.474  0.974  1.222  H14 ZIA 36 
ZIA H15 H15 H 0 1 N N N -30.174 -63.142 -17.347 4.952  0.752  0.529  H15 ZIA 37 
ZIA H16 H16 H 0 1 N N N -34.413 -64.457 -18.970 4.398  -2.640 0.432  H16 ZIA 38 
ZIA H17 H17 H 0 1 N N N -35.969 -64.648 -17.901 2.892  -3.783 0.146  H17 ZIA 39 
ZIA H18 H18 H 0 1 N N N -35.537 -65.726 -16.531 1.618  -3.308 1.293  H18 ZIA 40 
ZIA H19 H19 H 0 1 N N N -37.626 -64.768 -16.296 0.870  -5.002 -0.216 H19 ZIA 41 
ZIA H20 H20 H 0 1 N N N -30.751 -62.459 -11.934 -5.801 -1.217 -0.640 H20 ZIA 42 
ZIA H21 H21 H 0 1 N N N -30.425 -62.333 -10.172 -4.232 -2.070 -0.778 H21 ZIA 43 
ZIA H22 H22 H 0 1 N N N -33.779 -60.376 -11.527 -3.030 0.779  1.518  H22 ZIA 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZIA O3  C5  SING N N 1  
ZIA O2  C4  SING N N 2  
ZIA C5  C4  SING N N 3  
ZIA C5  C6  SING N N 4  
ZIA C4  C3  SING N N 5  
ZIA C7  C6  SING N N 6  
ZIA C7  O4  SING N N 7  
ZIA C6  O5  SING N N 8  
ZIA C3  N1  SING N N 9  
ZIA C3  C8  SING N N 10 
ZIA O5  C8  SING N N 11 
ZIA N1  C2  SING N N 12 
ZIA C8  O6  SING N N 13 
ZIA C2  O1  DOUB N N 14 
ZIA C2  C1  SING N N 15 
ZIA O6  C9  SING N N 16 
ZIA C9  C10 SING N N 17 
ZIA N2  C10 SING N N 18 
ZIA N2  C13 SING N N 19 
ZIA C10 C11 SING N N 20 
ZIA C12 C13 SING N N 21 
ZIA C12 C11 SING N N 22 
ZIA C13 O7  DOUB N N 23 
ZIA C10 H1  SING N N 24 
ZIA C9  H2  SING N N 25 
ZIA C9  H3  SING N N 26 
ZIA C4  H4  SING N N 27 
ZIA N1  H5  SING N N 28 
ZIA C6  H6  SING N N 29 
ZIA C5  H7  SING N N 30 
ZIA C8  H8  SING N N 31 
ZIA C11 H9  SING N N 32 
ZIA C11 H10 SING N N 33 
ZIA C1  H11 SING N N 34 
ZIA C1  H12 SING N N 35 
ZIA C1  H13 SING N N 36 
ZIA C3  H14 SING N N 37 
ZIA O2  H15 SING N N 38 
ZIA O3  H16 SING N N 39 
ZIA C7  H17 SING N N 40 
ZIA C7  H18 SING N N 41 
ZIA O4  H19 SING N N 42 
ZIA C12 H20 SING N N 43 
ZIA C12 H21 SING N N 44 
ZIA N2  H22 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZIA SMILES           ACDLabs              12.01 "CC(=O)NC1C(O)C(O)C(CO)OC1OCC1CCC(=O)N1"                                                                                                                            
ZIA InChI            InChI                1.06  "InChI=1S/C13H22N2O7/c1-6(17)14-10-12(20)11(19)8(4-16)22-13(10)21-5-7-2-3-9(18)15-7/h7-8,10-13,16,19-20H,2-5H2,1H3,(H,14,17)(H,15,18)/t7-,8-,10-,11-,12-,13-/m1/s1" 
ZIA InChIKey         InChI                1.06  KCXADKXCRNBSFF-IOJHDDLYSA-N                                                                                                                                         
ZIA SMILES_CANONICAL CACTVS               3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC[C@H]2CCC(=O)N2"                                                                                                 
ZIA SMILES           CACTVS               3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OC[CH]2CCC(=O)N2"                                                                                                          
ZIA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC[C@H]2CCC(=O)N2)CO)O)O"                                                                                                  
ZIA SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OCC2CCC(=O)N2)CO)O)O"                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZIA "SYSTEMATIC NAME" ACDLabs              12.01 "[(2R)-5-oxopyrrolidin-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside"                                                                      
ZIA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-4,5-bis(oxidanyl)-2-[[(2~{R})-5-oxidanylidenepyrrolidin-2-yl]methoxy]oxan-3-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZIA "Create component" 2023-03-13 RCSB 
ZIA "Initial release"  2023-05-24 RCSB 
# 
