data_E2B
# 
_chem_comp.id                                    E2B 
_chem_comp.name                                  "3-{[(9beta,14beta,16alpha,17alpha)-3,17-dihydroxyestra-1,3,5(10)-trien-16-yl]methyl}benzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H31 N O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-05-01 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        405.529 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     E2B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3CX0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
E2B N30  N30  N 0 1 N N N 10.116 -0.271 -10.643 -7.772 1.877  -0.865 N30  E2B 1  
E2B C9   C9   C 0 1 N N R 10.727 9.177  -11.756 1.795  0.136  -0.196 C9   E2B 2  
E2B C10  C10  C 0 1 N N S 10.738 10.637 -11.472 2.997  -0.633 -0.760 C10  E2B 3  
E2B C15  C15  C 0 1 N N S 11.451 8.402  -10.648 0.550  -0.588 -0.665 C15  E2B 4  
E2B C8   C8   C 0 1 N N N 11.160 8.916  -13.179 1.858  1.565  -0.735 C8   E2B 5  
E2B C14  C14  C 0 1 N N S 10.932 8.694  -9.264  0.574  -1.987 0.013  C14  E2B 6  
E2B C11  C11  C 0 1 Y N N 10.023 11.423 -12.558 4.272  0.095  -0.445 C11  E2B 7  
E2B C13  C13  C 0 1 N N N 11.018 10.172 -8.992  1.703  -2.787 -0.601 C13  E2B 8  
E2B C16  C16  C 0 1 N N N 11.335 6.918  -10.643 -0.785 -0.027 -0.163 C16  E2B 9  
E2B C28  C28  C 0 1 N N N 9.806  0.970  -10.606 -6.951 0.812  -0.764 C28  E2B 10 
E2B C25  C25  C 0 1 Y N N 12.254 1.520  -10.491 -5.325 2.135  0.581  C25  E2B 11 
E2B C6   C6   C 0 1 Y N N 9.736  10.862 -13.778 4.286  1.439  -0.135 C6   E2B 12 
E2B C12  C12  C 0 1 N N N 10.240 10.945 -10.054 3.024  -2.070 -0.261 C12  E2B 13 
E2B C17  C17  C 0 1 N N R 12.041 6.590  -9.364  -1.738 -1.248 -0.270 C17  E2B 14 
E2B C18  C18  C 0 1 N N S 11.913 7.852  -8.524  -0.841 -2.510 -0.212 C18  E2B 15 
E2B C20  C20  C 0 1 N N N 9.486  8.201  -8.971  0.816  -1.825 1.515  C20  E2B 16 
E2B C24  C24  C 0 1 Y N N 10.960 1.906  -10.254 -5.680 0.926  -0.019 C24  E2B 17 
E2B C1   C1   C 0 1 Y N N 9.681  12.728 -12.314 5.462  -0.621 -0.474 C1   E2B 18 
E2B C26  C26  C 0 1 Y N N 13.306 2.342  -10.182 -4.137 2.235  1.276  C26  E2B 19 
E2B C21  C21  C 0 1 N N N 11.539 5.333  -8.680  -2.723 -1.250 0.901  C21  E2B 20 
E2B C23  C23  C 0 1 Y N N 10.756 3.133  -9.668  -4.828 -0.175 0.088  C23  E2B 21 
E2B C27  C27  C 0 1 Y N N 13.087 3.560  -9.605  -3.298 1.140  1.377  C27  E2B 22 
E2B C7   C7   C 0 1 N N N 10.101 9.430  -14.119 3.035  2.275  -0.068 C7   E2B 23 
E2B C3   C3   C 0 1 Y N N 8.764  12.983 -14.458 6.681  1.354  0.102  C3   E2B 24 
E2B C22  C22  C 0 1 Y N N 11.811 3.975  -9.347  -3.643 -0.062 0.785  C22  E2B 25 
E2B C5   C5   C 0 1 Y N N 9.101  11.663 -14.730 5.495  2.066  0.135  C5   E2B 26 
E2B C2   C2   C 0 1 Y N N 9.056  13.515 -13.243 6.662  0.000  -0.203 C2   E2B 27 
E2B O4   O4   O 0 1 N N N 8.157  13.776 -15.326 7.859  1.977  0.368  O4   E2B 28 
E2B O29  O29  O 0 1 N N N 8.680  1.363  -10.762 -7.258 -0.243 -1.286 O29  E2B 29 
E2B O19  O19  O 0 1 N N N 11.467 7.573  -7.284  -1.237 -3.349 0.875  O19  E2B 30 
E2B HN30 HN30 H 0 0 N N N 11.088 -0.354 -10.423 -7.527 2.718  -0.449 HN30 E2B 31 
E2B HN3A HN3A H 0 0 N N N 9.495  -1.026 -10.855 -8.604 1.803  -1.357 HN3A E2B 32 
E2B H9   H9   H 0 1 N N N 9.705  8.772  -11.717 1.835  0.140  0.893  H9   E2B 33 
E2B H10  H10  H 0 1 N N N 11.783 10.980 -11.496 2.892  -0.669 -1.844 H10  E2B 34 
E2B H15  H15  H 0 1 N N N 12.472 8.742  -10.876 0.553  -0.688 -1.750 H15  E2B 35 
E2B H8   H8   H 0 1 N N N 12.111 9.433  -13.376 2.004  1.546  -1.815 H8   E2B 36 
E2B H8A  H8A  H 0 1 N N N 11.298 7.835  -13.332 0.931  2.088  -0.498 H8A  E2B 37 
E2B H13  H13  H 0 1 N N N 10.590 10.385 -8.001  1.712  -3.794 -0.184 H13  E2B 38 
E2B H13A H13A H 0 0 N N N 12.073 10.483 -9.019  1.577  -2.835 -1.683 H13A E2B 39 
E2B H16  H16  H 0 1 N N N 10.289 6.577  -10.647 -0.698 0.306  0.872  H16  E2B 40 
E2B H16A H16A H 0 0 N N N 11.756 6.427  -11.533 -1.126 0.786  -0.803 H16A E2B 41 
E2B H25  H25  H 0 1 N N N 12.448 0.552  -10.929 -5.977 2.992  0.499  H25  E2B 42 
E2B H12  H12  H 0 1 N N N 10.363 12.022 -9.865  3.852  -2.599 -0.732 H12  E2B 43 
E2B H12A H12A H 0 0 N N N 9.185  10.642 -9.991  3.165  -2.072 0.820  H12A E2B 44 
E2B H17  H17  H 0 1 N N N 13.095 6.329  -9.541  -2.280 -1.218 -1.215 H17  E2B 45 
E2B H18  H18  H 0 1 N N N 12.881 8.356  -8.387  -0.896 -3.057 -1.153 H18  E2B 46 
E2B H20  H20  H 0 1 N N N 9.351  8.085  -7.886  0.060  -1.162 1.935  H20  E2B 47 
E2B H20A H20A H 0 0 N N N 8.763  8.937  -9.354  0.755  -2.799 2.000  H20A E2B 48 
E2B H20B H20B H 0 0 N N N 9.322  7.233  -9.467  1.806  -1.399 1.679  H20B E2B 49 
E2B H1   H1   H 0 1 N N N 9.914  13.153 -11.349 5.446  -1.674 -0.712 H1   E2B 50 
E2B H26  H26  H 0 1 N N N 14.316 2.024  -10.396 -3.862 3.170  1.741  H26  E2B 51 
E2B H21  H21  H 0 1 N N N 12.022 5.299  -7.692  -3.310 -2.168 0.881  H21  E2B 52 
E2B H21A H21A H 0 0 N N N 10.444 5.431  -8.695  -2.172 -1.191 1.839  H21A E2B 53 
E2B H23  H23  H 0 1 N N N 9.747  3.450  -9.452  -5.097 -1.114 -0.374 H23  E2B 54 
E2B H27  H27  H 0 1 N N N 13.923 4.196  -9.352  -2.369 1.224  1.921  H27  E2B 55 
E2B H7   H7   H 0 1 N N N 10.485 9.392  -15.149 3.213  3.224  -0.574 H7   E2B 56 
E2B H7A  H7A  H 0 1 N N N 9.204  8.801  -14.022 2.791  2.469  0.976  H7A  E2B 57 
E2B H5   H5   H 0 1 N N N 8.867  11.247 -15.699 5.510  3.119  0.373  H5   E2B 58 
E2B H2   H2   H 0 1 N N N 8.800  14.539 -13.014 7.582  -0.564 -0.227 H2   E2B 59 
E2B HO4  HO4  H 0 1 N N N 8.012  14.627 -14.930 8.108  1.965  1.302  HO4  E2B 60 
E2B HO19 HO19 H 0 0 N N N 12.205 7.507  -6.689  -2.129 -3.711 0.787  HO19 E2B 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
E2B N30 C28  SING N N 1  
E2B C9  C10  SING N N 2  
E2B C9  C15  SING N N 3  
E2B C9  C8   SING N N 4  
E2B C10 C11  SING N N 5  
E2B C10 C12  SING N N 6  
E2B C15 C14  SING N N 7  
E2B C15 C16  SING N N 8  
E2B C8  C7   SING N N 9  
E2B C14 C13  SING N N 10 
E2B C14 C18  SING N N 11 
E2B C14 C20  SING N N 12 
E2B C11 C6   DOUB Y N 13 
E2B C11 C1   SING Y N 14 
E2B C13 C12  SING N N 15 
E2B C16 C17  SING N N 16 
E2B C28 C24  SING N N 17 
E2B C28 O29  DOUB N N 18 
E2B C25 C24  DOUB Y N 19 
E2B C25 C26  SING Y N 20 
E2B C6  C7   SING N N 21 
E2B C6  C5   SING Y N 22 
E2B C17 C18  SING N N 23 
E2B C17 C21  SING N N 24 
E2B C18 O19  SING N N 25 
E2B C24 C23  SING Y N 26 
E2B C1  C2   DOUB Y N 27 
E2B C26 C27  DOUB Y N 28 
E2B C21 C22  SING N N 29 
E2B C23 C22  DOUB Y N 30 
E2B C27 C22  SING Y N 31 
E2B C3  C5   DOUB Y N 32 
E2B C3  C2   SING Y N 33 
E2B C3  O4   SING N N 34 
E2B N30 HN30 SING N N 35 
E2B N30 HN3A SING N N 36 
E2B C9  H9   SING N N 37 
E2B C10 H10  SING N N 38 
E2B C15 H15  SING N N 39 
E2B C8  H8   SING N N 40 
E2B C8  H8A  SING N N 41 
E2B C13 H13  SING N N 42 
E2B C13 H13A SING N N 43 
E2B C16 H16  SING N N 44 
E2B C16 H16A SING N N 45 
E2B C25 H25  SING N N 46 
E2B C12 H12  SING N N 47 
E2B C12 H12A SING N N 48 
E2B C17 H17  SING N N 49 
E2B C18 H18  SING N N 50 
E2B C20 H20  SING N N 51 
E2B C20 H20A SING N N 52 
E2B C20 H20B SING N N 53 
E2B C1  H1   SING N N 54 
E2B C26 H26  SING N N 55 
E2B C21 H21  SING N N 56 
E2B C21 H21A SING N N 57 
E2B C23 H23  SING N N 58 
E2B C27 H27  SING N N 59 
E2B C7  H7   SING N N 60 
E2B C7  H7A  SING N N 61 
E2B C5  H5   SING N N 62 
E2B C2  H2   SING N N 63 
E2B O4  HO4  SING N N 64 
E2B O19 HO19 SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
E2B SMILES           ACDLabs              10.04 "O=C(N)c1cc(ccc1)CC5CC4C3C(c2ccc(O)cc2CC3)CCC4(C)C5O" 
E2B SMILES_CANONICAL CACTVS               3.341 "C[C@]12CC[C@H]3[C@@H](CCc4cc(O)ccc34)[C@@H]1C[C@H](Cc5cccc(c5)C(N)=O)[C@@H]2O" 
E2B SMILES           CACTVS               3.341 "C[C]12CC[CH]3[CH](CCc4cc(O)ccc34)[CH]1C[CH](Cc5cccc(c5)C(N)=O)[CH]2O" 
E2B SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@]12CC[C@@H]3c4ccc(cc4CC[C@H]3[C@@H]1C[C@@H]([C@@H]2O)Cc5cccc(c5)C(=O)N)O" 
E2B SMILES           "OpenEye OEToolkits" 1.5.0 "CC12CCC3c4ccc(cc4CCC3C1CC(C2O)Cc5cccc(c5)C(=O)N)O" 
E2B InChI            InChI                1.03  
"InChI=1S/C26H31NO3/c1-26-10-9-21-20-8-6-19(28)13-16(20)5-7-22(21)23(26)14-18(24(26)29)12-15-3-2-4-17(11-15)25(27)30/h2-4,6,8,11,13,18,21-24,28-29H,5,7,9-10,12,14H2,1H3,(H2,27,30)/t18-,21+,22+,23-,24-,26-/m0/s1" 
E2B InChIKey         InChI                1.03  RSVOVHDOLNWYER-RYZVYYIHSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
E2B "SYSTEMATIC NAME" ACDLabs              10.04 "3-{[(9beta,14beta,16alpha,17alpha)-3,17-dihydroxyestra-1,3,5(10)-trien-16-yl]methyl}benzamide"                                           
E2B "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[[(8R,9S,13S,14S,16R,17S)-3,17-dihydroxy-13-methyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-16-yl]methyl]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
E2B "Create component"     2008-05-01 RCSB 
E2B "Modify aromatic_flag" 2011-06-04 RCSB 
E2B "Modify descriptor"    2011-06-04 RCSB 
# 
