data_GUB
# 
_chem_comp.id                                    GUB 
_chem_comp.name                                  "9-alpha-L-lyxofuranosyl-N-(2-phenylethyl)-9H-purin-6-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H21 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-04-10 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        371.390 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GUB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3GUB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GUB C2   C2   C 0 1 N N N -24.777 5.626  -6.550  4.716  1.215  0.360  C2   GUB 1  
GUB C3   C3   C 0 1 N N N -24.263 5.714  -7.984  3.750  0.090  -0.017 C3   GUB 2  
GUB C5   C5   C 0 1 Y N N -25.680 5.541  -10.036 1.318  -0.262 -0.242 C5   GUB 3  
GUB O18  O18  O 0 1 N N N -21.049 1.049  -12.580 -6.093 2.982  -0.415 O18  GUB 4  
GUB C17  C17  C 0 1 N N N -21.575 0.427  -13.768 -6.367 1.699  0.149  C17  GUB 5  
GUB C16  C16  C 0 1 N N S -22.595 1.518  -13.833 -5.052 0.954  0.389  C16  GUB 6  
GUB C19  C19  C 0 1 N N S -22.414 2.804  -14.660 -5.310 -0.390 1.116  C19  GUB 7  
GUB O20  O20  O 0 1 N N N -21.614 2.751  -15.859 -6.517 -0.998 0.651  O20  GUB 8  
GUB O15  O15  O 0 1 N N N -23.962 1.229  -13.585 -4.461 0.550  -0.865 O15  GUB 9  
GUB C14  C14  C 0 1 N N R -24.598 2.489  -13.663 -3.562 -0.533 -0.576 C14  GUB 10 
GUB C21  C21  C 0 1 N N R -23.862 3.255  -14.780 -4.075 -1.225 0.701  C21  GUB 11 
GUB O22  O22  O 0 1 N N N -24.374 2.831  -16.043 -4.454 -2.574 0.420  O22  GUB 12 
GUB N13  N13  N 0 1 Y N N -24.460 3.179  -12.335 -2.211 -0.012 -0.352 N13  GUB 13 
GUB C12  C12  C 0 1 Y N N -23.508 3.032  -11.384 -1.889 1.254  0.041  C12  GUB 14 
GUB N11  N11  N 0 1 Y N N -23.759 3.885  -10.363 -0.597 1.372  0.144  N11  GUB 15 
GUB C10  C10  C 0 1 Y N N -24.899 4.563  -10.665 -0.009 0.194  -0.175 C10  GUB 16 
GUB C9   C9   C 0 1 Y N N -25.319 4.102  -11.913 -1.038 -0.708 -0.497 C9   GUB 17 
GUB N6   N6   N 0 1 Y N N -26.777 6.013  -10.692 1.538  -1.521 -0.605 N6   GUB 18 
GUB C7   C7   C 0 1 Y N N -27.159 5.534  -11.893 0.538  -2.333 -0.897 C7   GUB 19 
GUB N8   N8   N 0 1 Y N N -26.428 4.593  -12.514 -0.721 -1.949 -0.849 N8   GUB 20 
GUB N4   N4   N 0 1 N N N -25.392 6.108  -8.830  2.373  0.583  0.058  N4   GUB 21 
GUB C1   C1   C 0 1 Y N N -23.727 5.102  -5.581  6.133  0.707  0.283  C1   GUB 22 
GUB C23  C23  C 0 1 Y N N -23.465 3.737  -5.510  6.840  0.810  -0.900 C23  GUB 23 
GUB C24  C24  C 0 1 Y N N -22.507 3.261  -4.610  8.140  0.344  -0.970 C24  GUB 24 
GUB C25  C25  C 0 1 Y N N -21.821 4.159  -3.774  8.733  -0.223 0.142  C25  GUB 25 
GUB C26  C26  C 0 1 Y N N -22.091 5.519  -3.855  8.025  -0.325 1.326  C26  GUB 26 
GUB C27  C27  C 0 1 Y N N -23.057 5.991  -4.739  6.727  0.144  1.398  C27  GUB 27 
GUB H2   H2   H 0 1 N N N -25.077 6.634  -6.226  4.590  2.048  -0.331 H2   GUB 28 
GUB H2A  H2A  H 0 1 N N N -25.622 4.921  -6.541  4.505  1.550  1.376  H2A  GUB 29 
GUB H3   H3   H 0 1 N N N -23.458 6.461  -8.053  3.961  -0.245 -1.032 H3   GUB 30 
GUB H3A  H3A  H 0 1 N N N -23.854 4.746  -8.309  3.876  -0.744 0.674  H3A  GUB 31 
GUB HO18 HO18 H 0 0 N N N -20.933 0.393  -11.903 -6.882 3.510  -0.594 HO18 GUB 32 
GUB H17  H17  H 0 1 N N N -20.894 0.322  -14.626 -6.892 1.823  1.097  H17  GUB 33 
GUB H17A H17A H 0 0 N N N -21.875 -0.631 -13.770 -6.990 1.125  -0.537 H17A GUB 34 
GUB H16  H16  H 0 1 N N N -22.111 1.809  -12.889 -4.361 1.573  0.960  H16  GUB 35 
GUB H19  H19  H 0 1 N N N -21.754 3.542  -14.182 -5.340 -0.248 2.196  H19  GUB 36 
GUB HO20 HO20 H 0 0 N N N -22.183 2.739  -16.620 -7.310 -0.468 0.808  HO20 GUB 37 
GUB H14  H14  H 0 1 N N N -25.672 2.421  -13.889 -3.555 -1.240 -1.405 H14  GUB 38 
GUB H21  H21  H 0 1 N N N -23.978 4.346  -14.699 -3.315 -1.197 1.482  H21  GUB 39 
GUB HO22 HO22 H 0 0 N N N -25.318 2.737  -15.987 -4.839 -3.040 1.175  HO22 GUB 40 
GUB H12  H12  H 0 1 N N N -22.678 2.342  -11.432 -2.601 2.042  0.237  H12  GUB 41 
GUB H7   H7   H 0 1 N N N -28.058 5.909  -12.359 0.761  -3.349 -1.188 H7   GUB 42 
GUB HN4  HN4  H 0 1 N N N -26.203 5.942  -8.269  2.200  1.501  0.317  HN4  GUB 43 
GUB H23  H23  H 0 1 N N N -24.000 3.048  -6.148  6.378  1.253  -1.769 H23  GUB 44 
GUB H24  H24  H 0 1 N N N -22.294 2.204  -4.557  8.693  0.424  -1.895 H24  GUB 45 
GUB H25  H25  H 0 1 N N N -21.087 3.793  -3.072  9.748  -0.588 0.087  H25  GUB 46 
GUB H26  H26  H 0 1 N N N -21.549 6.213  -3.230  8.488  -0.769 2.195  H26  GUB 47 
GUB H27  H27  H 0 1 N N N -23.288 7.045  -4.773  6.176  0.068  2.323  H27  GUB 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GUB C2  C3   SING N N 1  
GUB C2  C1   SING N N 2  
GUB C3  N4   SING N N 3  
GUB C5  C10  DOUB Y N 4  
GUB C5  N6   SING Y N 5  
GUB C5  N4   SING N N 6  
GUB O18 C17  SING N N 7  
GUB C17 C16  SING N N 8  
GUB C16 C19  SING N N 9  
GUB C16 O15  SING N N 10 
GUB C19 O20  SING N N 11 
GUB C19 C21  SING N N 12 
GUB O15 C14  SING N N 13 
GUB C14 C21  SING N N 14 
GUB C14 N13  SING N N 15 
GUB C21 O22  SING N N 16 
GUB N13 C12  SING Y N 17 
GUB N13 C9   SING Y N 18 
GUB C12 N11  DOUB Y N 19 
GUB N11 C10  SING Y N 20 
GUB C10 C9   SING Y N 21 
GUB C9  N8   DOUB Y N 22 
GUB N6  C7   DOUB Y N 23 
GUB C7  N8   SING Y N 24 
GUB C1  C23  DOUB Y N 25 
GUB C1  C27  SING Y N 26 
GUB C23 C24  SING Y N 27 
GUB C24 C25  DOUB Y N 28 
GUB C25 C26  SING Y N 29 
GUB C26 C27  DOUB Y N 30 
GUB C2  H2   SING N N 31 
GUB C2  H2A  SING N N 32 
GUB C3  H3   SING N N 33 
GUB C3  H3A  SING N N 34 
GUB O18 HO18 SING N N 35 
GUB C17 H17  SING N N 36 
GUB C17 H17A SING N N 37 
GUB C16 H16  SING N N 38 
GUB C19 H19  SING N N 39 
GUB O20 HO20 SING N N 40 
GUB C14 H14  SING N N 41 
GUB C21 H21  SING N N 42 
GUB O22 HO22 SING N N 43 
GUB C12 H12  SING N N 44 
GUB C7  H7   SING N N 45 
GUB N4  HN4  SING N N 46 
GUB C23 H23  SING N N 47 
GUB C24 H24  SING N N 48 
GUB C25 H25  SING N N 49 
GUB C26 H26  SING N N 50 
GUB C27 H27  SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GUB SMILES           ACDLabs              10.04 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CO)NCCc4ccccc4"                                                                                                                                     
GUB SMILES_CANONICAL CACTVS               3.341 "OC[C@@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(NCCc4ccccc4)ncnc23"                                                                                                                     
GUB SMILES           CACTVS               3.341 "OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(NCCc4ccccc4)ncnc23"                                                                                                                           
GUB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CCNc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]([C@@H](O4)CO)O)O"                                                                                                              
GUB SMILES           "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CCNc2c3c(ncn2)n(cn3)C4C(C(C(O4)CO)O)O"                                                                                                                                 
GUB InChI            InChI                1.03  "InChI=1S/C18H21N5O4/c24-8-12-14(25)15(26)18(27-12)23-10-22-13-16(20-9-21-17(13)23)19-7-6-11-4-2-1-3-5-11/h1-5,9-10,12,14-15,18,24-26H,6-8H2,(H,19,20,21)/t12-,14+,15+,18+/m0/s1" 
GUB InChIKey         InChI                1.03  LGZYEDZSPHLISU-KDQZPGIASA-N                                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GUB "SYSTEMATIC NAME" ACDLabs              10.04 "9-alpha-L-lyxofuranosyl-N-(2-phenylethyl)-9H-purin-6-amine"                       
GUB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3S,4R,5R)-2-(hydroxymethyl)-5-[6-(phenethylamino)purin-9-yl]oxolane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GUB "Create component"     2009-04-10 RCSB 
GUB "Modify aromatic_flag" 2011-06-04 RCSB 
GUB "Modify descriptor"    2011-06-04 RCSB 
# 
