data_J3B
# 
_chem_comp.id                                    J3B 
_chem_comp.name                                  "(3~{R})-~{N}-(4-carbamimidoylphenyl)-2-oxidanylidene-piperidine-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H16 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-01-17 
_chem_comp.pdbx_modified_date                    2019-02-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        260.292 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     J3B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6QH9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
J3B C10 C1  C 0 1 Y N N -22.736 1.105  -23.697 -1.329 -0.586 0.405  C10 J3B 1  
J3B C12 C2  C 0 1 Y N N -23.341 1.152  -22.441 -0.942 0.550  -0.298 C12 J3B 2  
J3B C15 C3  C 0 1 N N N -24.234 -0.405 -20.700 1.293  -0.184 -0.629 C15 J3B 3  
J3B N01 N1  N 0 1 N N N -23.909 5.710  -24.549 -5.455 -1.429 0.944  N01 J3B 4  
J3B C04 C4  C 0 1 N N N -23.189 4.642  -24.920 -5.070 -0.298 0.256  C04 J3B 5  
J3B N05 N2  N 0 1 N N N -22.528 4.699  -26.033 -5.971 0.513  -0.221 N05 J3B 6  
J3B C07 C5  C 0 1 Y N N -23.241 3.442  -24.062 -3.633 -0.004 0.060  C07 J3B 7  
J3B C08 C6  C 0 1 Y N N -22.679 2.239  -24.490 -2.666 -0.864 0.584  C08 J3B 8  
J3B N13 N3  N 0 1 N N N -23.427 -0.089 -21.747 0.413  0.826  -0.484 N13 J3B 9  
J3B O16 O1  O 0 1 N N N -24.972 0.398  -20.134 0.897  -1.329 -0.695 O16 J3B 10 
J3B C17 C7  C 0 1 N N R -24.200 -1.868 -20.247 2.769  0.108  -0.709 C17 J3B 11 
J3B C19 C8  C 0 1 N N N -23.340 -2.194 -19.012 3.539  -1.205 -0.872 C19 J3B 12 
J3B C22 C9  C 0 1 N N N -23.678 -3.594 -18.500 5.033  -0.918 -0.675 C22 J3B 13 
J3B C25 C10 C 0 1 N N N -23.514 -4.627 -19.607 5.269  -0.528 0.785  C25 J3B 14 
J3B N28 N4  N 0 1 N N N -23.986 -4.171 -20.933 4.342  0.521  1.188  N28 J3B 15 
J3B C30 C11 C 0 1 N N N -24.266 -2.919 -21.343 3.209  0.806  0.545  C30 J3B 16 
J3B O31 O2  O 0 1 N N N -24.630 -2.678 -22.492 2.495  1.676  0.998  O31 J3B 17 
J3B C32 C12 C 0 1 Y N N -23.932 2.349  -22.018 -1.903 1.411  -0.817 C32 J3B 18 
J3B C34 C13 C 0 1 Y N N -23.873 3.481  -22.819 -3.242 1.141  -0.636 C34 J3B 19 
J3B H1  H1  H 0 1 N N N -22.310 0.179  -24.053 -0.581 -1.253 0.806  H1  J3B 20 
J3B H2  H2  H 0 1 N N N -24.458 5.677  -23.714 -4.784 -2.032 1.299  H2  J3B 21 
J3B H3  H3  H 0 1 N N N -23.897 6.540  -25.107 -6.397 -1.621 1.072  H3  J3B 22 
J3B H4  H4  H 0 1 N N N -22.062 3.838  -26.237 -5.701 1.309  -0.705 H4  J3B 23 
J3B H5  H5  H 0 1 N N N -22.193 2.191  -25.453 -2.966 -1.747 1.130  H5  J3B 24 
J3B H6  H6  H 0 1 N N N -22.820 -0.816 -22.069 0.722  1.746  -0.508 H6  J3B 25 
J3B H7  H7  H 0 1 N N N -25.208 -1.965 -19.816 2.965  0.751  -1.568 H7  J3B 26 
J3B H8  H8  H 0 1 N N N -22.276 -2.153 -19.287 3.202  -1.923 -0.124 H8  J3B 27 
J3B H9  H9  H 0 1 N N N -23.543 -1.457 -18.221 3.371  -1.608 -1.870 H9  J3B 28 
J3B H10 H10 H 0 1 N N N -24.719 -3.607 -18.145 5.611  -1.811 -0.913 H10 J3B 29 
J3B H11 H11 H 0 1 N N N -23.004 -3.846 -17.668 5.338  -0.101 -1.328 H11 J3B 30 
J3B H12 H12 H 0 1 N N N -24.083 -5.526 -19.328 5.122  -1.402 1.419  H12 J3B 31 
J3B H13 H13 H 0 1 N N N -22.447 -4.880 -19.688 6.291  -0.167 0.900  H13 J3B 32 
J3B H14 H14 H 0 1 N N N -24.114 -4.889 -21.617 4.563  1.046  1.974  H14 J3B 33 
J3B H15 H15 H 0 1 N N N -24.436 2.392  -21.064 -1.600 2.293  -1.362 H15 J3B 34 
J3B H16 H16 H 0 1 N N N -24.321 4.402  -22.476 -3.988 1.807  -1.042 H16 J3B 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
J3B N05 C04 DOUB N N 1  
J3B C04 N01 SING N N 2  
J3B C04 C07 SING N N 3  
J3B C08 C07 DOUB Y N 4  
J3B C08 C10 SING Y N 5  
J3B C07 C34 SING Y N 6  
J3B C10 C12 DOUB Y N 7  
J3B C34 C32 DOUB Y N 8  
J3B O31 C30 DOUB N N 9  
J3B C12 C32 SING Y N 10 
J3B C12 N13 SING N N 11 
J3B N13 C15 SING N N 12 
J3B C30 N28 SING N N 13 
J3B C30 C17 SING N N 14 
J3B N28 C25 SING N N 15 
J3B C15 C17 SING N N 16 
J3B C15 O16 DOUB N N 17 
J3B C17 C19 SING N N 18 
J3B C25 C22 SING N N 19 
J3B C19 C22 SING N N 20 
J3B C10 H1  SING N N 21 
J3B N01 H2  SING N N 22 
J3B N01 H3  SING N N 23 
J3B N05 H4  SING N N 24 
J3B C08 H5  SING N N 25 
J3B N13 H6  SING N N 26 
J3B C17 H7  SING N N 27 
J3B C19 H8  SING N N 28 
J3B C19 H9  SING N N 29 
J3B C22 H10 SING N N 30 
J3B C22 H11 SING N N 31 
J3B C25 H12 SING N N 32 
J3B C25 H13 SING N N 33 
J3B N28 H14 SING N N 34 
J3B C32 H15 SING N N 35 
J3B C34 H16 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
J3B InChI            InChI                1.03  "InChI=1S/C13H16N4O2/c14-11(15)8-3-5-9(6-4-8)17-13(19)10-2-1-7-16-12(10)18/h3-6,10H,1-2,7H2,(H3,14,15)(H,16,18)(H,17,19)/t10-/m1/s1" 
J3B InChIKey         InChI                1.03  IZWNURHHAQZXMJ-SNVBAGLBSA-N                                                                                                          
J3B SMILES_CANONICAL CACTVS               3.385 "NC(=N)c1ccc(NC(=O)[C@@H]2CCCNC2=O)cc1"                                                                                              
J3B SMILES           CACTVS               3.385 "NC(=N)c1ccc(NC(=O)[CH]2CCCNC2=O)cc1"                                                                                                
J3B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[H]/N=C(/c1ccc(cc1)NC(=O)[C@@H]2CCCNC2=O)\N"                                                                                        
J3B SMILES           "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1C(=N)N)NC(=O)C2CCCNC2=O"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
J3B "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{R})-~{N}-(4-carbamimidoylphenyl)-2-oxidanylidene-piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
J3B "Create component" 2019-01-17 EBI  
J3B "Initial release"  2019-02-06 RCSB 
# 
