data_UEB
#

_chem_comp.id                                   UEB
_chem_comp.name                                 "(S)-1-(2-(amino(phenyl)methyl)benzyl)-2-thioxo-1,2,3,5-tetrahydro-4H-pyrrolo[3,2-d]pyrimidin-4-one"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H18 N4 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1-[[2-[(~{R})-azanyl(phenyl)methyl]phenyl]methyl]-2-sulfanylidene-5~{H}-pyrrolo[3,2-d]pyrimidin-4-one"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-11
_chem_comp.pdbx_modified_date                   2022-02-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       362.448
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    UEB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7NI1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UEB  C2   C1   C  0  1  N  N  R  -2.899  21.737  14.739   2.527   1.170   1.047  C2   UEB   1  
UEB  C7   C2   C  0  1  Y  N  N  -4.991  24.581  12.294   4.595  -2.490   0.293  C7   UEB   2  
UEB  C8   C3   C  0  1  Y  N  N  -3.599  24.677  12.418   3.520  -2.470   1.162  C8   UEB   3  
UEB  C9   C4   C  0  1  Y  N  N  -2.918  23.749  13.216   2.851  -1.286   1.406  C9   UEB   4  
UEB  C10  C5   C  0  1  Y  N  N  -3.086  21.912  16.222   1.702   1.539  -0.159  C10  UEB   5  
UEB  C11  C6   C  0  1  Y  N  N  -3.179  23.203  16.762   2.225   2.380  -1.123  C11  UEB   6  
UEB  C12  C7   C  0  1  Y  N  N  -3.352  23.416  18.134   1.468   2.718  -2.230  C12  UEB   7  
UEB  C13  C8   C  0  1  Y  N  N  -3.429  22.323  19.002   0.189   2.215  -2.372  C13  UEB   8  
UEB  C14  C9   C  0  1  Y  N  N  -3.324  21.032  18.474  -0.334   1.374  -1.408  C14  UEB   9  
UEB  C15  C10  C  0  1  Y  N  N  -3.157  20.807  17.095   0.424   1.031  -0.304  C15  UEB  10  
UEB  C16  C11  C  0  1  N  N  N  -3.084  19.403  16.562  -0.144   0.110   0.744  C16  UEB  11  
UEB  C21  C12  C  0  1  N  N  N  -4.647  16.284  19.221  -4.000  -1.123  -0.419  C21  UEB  12  
UEB  C27  C13  C  0  1  Y  N  N  -1.382  17.202  17.883  -2.757   1.501   1.673  C27  UEB  13  
UEB  N1   N1   N  0  1  N  N  N  -1.487  21.670  14.409   3.501   2.236   1.318  N1   UEB  14  
UEB  C4   C14  C  0  1  Y  N  N  -3.619  22.729  13.882   3.257  -0.121   0.781  C4   UEB  15  
UEB  C5   C15  C  0  1  Y  N  N  -5.010  22.637  13.743   4.331  -0.141  -0.089  C5   UEB  16  
UEB  C6   C16  C  0  1  Y  N  N  -5.698  23.566  12.953   5.001  -1.326  -0.333  C6   UEB  17  
UEB  N17  N2   N  0  1  N  N  N  -3.634  18.391  17.437  -1.495  -0.301   0.353  N17  UEB  18  
UEB  C18  C17  C  0  1  N  N  N  -5.040  18.314  17.733  -1.666  -1.357  -0.466  C18  UEB  19  
UEB  S19  S1   S  0  1  N  N  N  -6.200  19.364  17.152  -0.292  -2.204  -1.037  S19  UEB  20  
UEB  N20  N3   N  0  1  N  N  N  -5.423  17.275  18.612  -2.891  -1.762  -0.845  N20  UEB  21  
UEB  O22  O1   O  0  1  N  N  N  -5.093  15.446  19.992  -5.102  -1.504  -0.771  O22  UEB  22  
UEB  C23  C18  C  0  1  Y  N  N  -3.271  16.413  18.835  -3.870  -0.012   0.445  C23  UEB  23  
UEB  N24  N4   N  0  1  Y  N  N  -2.214  15.644  19.236  -4.772   0.837   1.050  N24  UEB  24  
UEB  C26  C19  C  0  1  Y  N  N  -1.056  16.111  18.666  -4.083   1.746   1.789  C26  UEB  25  
UEB  C28  C20  C  0  1  Y  N  N  -2.783  17.404  18.003  -2.597   0.394   0.828  C28  UEB  26  
UEB  H1   H1   H  0  1  N  N  N  -3.327  20.754  14.493   1.873   1.047   1.910  H1   UEB  27  
UEB  H2   H2   H  0  1  N  N  N  -5.524  25.296  11.685   5.121  -3.415   0.106  H2   UEB  28  
UEB  H3   H3   H  0  1  N  N  N  -3.057  25.457  11.904   3.204  -3.380   1.650  H3   UEB  29  
UEB  H4   H4   H  0  1  N  N  N  -1.845  23.818  13.320   2.011  -1.270   2.084  H4   UEB  30  
UEB  H5   H5   H  0  1  N  N  N  -3.115  24.055  16.101   3.225   2.773  -1.012  H5   UEB  31  
UEB  H6   H6   H  0  1  N  N  N  -3.426  24.422  18.521   1.877   3.376  -2.983  H6   UEB  32  
UEB  H7   H7   H  0  1  N  N  N  -3.567  22.473  20.063  -0.403   2.480  -3.236  H7   UEB  33  
UEB  H8   H8   H  0  1  N  N  N  -3.372  20.185  19.143  -1.334   0.981  -1.519  H8   UEB  34  
UEB  H9   H9   H  0  1  N  N  N  -3.636  19.369  15.611   0.491  -0.771   0.836  H9   UEB  35  
UEB  H10  H10  H  0  1  N  N  N  -2.026  19.161  16.381  -0.186   0.630   1.701  H10  UEB  36  
UEB  H11  H11  H  0  1  N  N  N  -0.699  17.792  17.290  -1.964   2.060   2.147  H11  UEB  37  
UEB  H12  H12  H  0  1  N  N  N  -1.038  20.999  14.999   4.119   2.370   0.532  H12  UEB  38  
UEB  H13  H13  H  0  1  N  N  N  -1.381  21.397  13.453   3.036   3.097   1.563  H13  UEB  39  
UEB  H15  H15  H  0  1  N  N  N  -5.552  21.849  14.245   4.647   0.768  -0.577  H15  UEB  40  
UEB  H16  H16  H  0  1  N  N  N  -6.771  23.501  12.852   5.840  -1.342  -1.012  H16  UEB  41  
UEB  H17  H17  H  0  1  N  N  N  -6.398  17.244  18.832  -2.978  -2.526  -1.435  H17  UEB  42  
UEB  H18  H18  H  0  1  N  N  N  -2.275  14.859  19.852  -5.737   0.793   0.963  H18  UEB  43  
UEB  H19  H19  H  0  1  N  N  N  -0.067  15.699  18.805  -4.524   2.538   2.376  H19  UEB  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UEB  C7   C8   DOUB  Y  N   1  
UEB  C7   C6   SING  Y  N   2  
UEB  C8   C9   SING  Y  N   3  
UEB  C6   C5   DOUB  Y  N   4  
UEB  C9   C4   DOUB  Y  N   5  
UEB  C5   C4   SING  Y  N   6  
UEB  C4   C2   SING  N  N   7  
UEB  N1   C2   SING  N  N   8  
UEB  C2   C10  SING  N  N   9  
UEB  C10  C11  DOUB  Y  N  10  
UEB  C10  C15  SING  Y  N  11  
UEB  C16  C15  SING  N  N  12  
UEB  C16  N17  SING  N  N  13  
UEB  C11  C12  SING  Y  N  14  
UEB  C15  C14  DOUB  Y  N  15  
UEB  S19  C18  DOUB  N  N  16  
UEB  N17  C18  SING  N  N  17  
UEB  N17  C28  SING  N  N  18  
UEB  C18  N20  SING  N  N  19  
UEB  C27  C28  SING  Y  N  20  
UEB  C27  C26  DOUB  Y  N  21  
UEB  C28  C23  DOUB  Y  N  22  
UEB  C12  C13  DOUB  Y  N  23  
UEB  C14  C13  SING  Y  N  24  
UEB  N20  C21  SING  N  N  25  
UEB  C26  N24  SING  Y  N  26  
UEB  C23  C21  SING  N  N  27  
UEB  C23  N24  SING  Y  N  28  
UEB  C21  O22  DOUB  N  N  29  
UEB  C2   H1   SING  N  N  30  
UEB  C7   H2   SING  N  N  31  
UEB  C8   H3   SING  N  N  32  
UEB  C9   H4   SING  N  N  33  
UEB  C11  H5   SING  N  N  34  
UEB  C12  H6   SING  N  N  35  
UEB  C13  H7   SING  N  N  36  
UEB  C14  H8   SING  N  N  37  
UEB  C16  H9   SING  N  N  38  
UEB  C16  H10  SING  N  N  39  
UEB  C27  H11  SING  N  N  40  
UEB  N1   H12  SING  N  N  41  
UEB  N1   H13  SING  N  N  42  
UEB  C5   H15  SING  N  N  43  
UEB  C6   H16  SING  N  N  44  
UEB  N20  H17  SING  N  N  45  
UEB  N24  H18  SING  N  N  46  
UEB  C26  H19  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UEB  InChI             InChI                 1.03   "InChI=1S/C20H18N4OS/c21-17(13-6-2-1-3-7-13)15-9-5-4-8-14(15)12-24-16-10-11-22-18(16)19(25)23-20(24)26/h1-11,17,22H,12,21H2,(H,23,25,26)/t17-/m1/s1"  
UEB  InChIKey          InChI                 1.03   JABFRGYJMKKWKF-QGZVFWFLSA-N  
UEB  SMILES_CANONICAL  CACTVS                3.385  "N[C@H](c1ccccc1)c2ccccc2CN3C(=S)NC(=O)c4[nH]ccc34"  
UEB  SMILES            CACTVS                3.385  "N[CH](c1ccccc1)c2ccccc2CN3C(=S)NC(=O)c4[nH]ccc34"  
UEB  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)[C@H](c2ccccc2CN3c4cc[nH]c4C(=O)NC3=S)N"  
UEB  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)C(c2ccccc2CN3c4cc[nH]c4C(=O)NC3=S)N"  
#
_pdbx_chem_comp_identifier.comp_id          UEB
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-[[2-[(~{R})-azanyl(phenyl)methyl]phenyl]methyl]-2-sulfanylidene-5~{H}-pyrrolo[3,2-d]pyrimidin-4-one"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     UEB
_pdbx_chem_comp_synonyms.name        "1-[[2-[(~{R})-azanyl(phenyl)methyl]phenyl]methyl]-2-sulfanylidene-5~{H}-pyrrolo[3,2-d]pyrimidin-4-one"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UEB  "Create component"  2021-02-11  PDBE  
UEB  "Initial release"   2022-02-23  RCSB  
##
