data_V0B
#

_chem_comp.id                                   V0B
_chem_comp.name                                 "N-[(6-methylimidazo[1,2-a]pyridin-2-yl)methyl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H15 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "~{N}-[(6-methylimidazo[1,2-a]pyridin-2-yl)methyl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-31
_chem_comp.pdbx_modified_date                   2021-04-02
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       333.344
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V0B
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7O2X
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V0B  C10  C1   C  0  1  N  N  N  -41.552  36.898  27.012   1.165  -1.899  -0.038  C10  V0B   1  
V0B  C13  C2   C  0  1  N  N  N  -40.047  38.988  27.081   3.639  -1.613  -0.095  C13  V0B   2  
V0B  C17  C3   C  0  1  N  N  N  -39.559  41.818  24.359   5.667   1.386  -0.029  C17  V0B   3  
V0B  C20  C4   C  0  1  N  N  N  -41.573  40.014  22.951   3.140   2.477   0.068  C20  V0B   4  
V0B  C21  C5   C  0  1  N  N  N  -41.023  39.692  24.364   3.318   1.081   0.012  C21  V0B   5  
V0B  C01  C6   C  0  1  N  N  N  -42.978  29.140  21.758  -7.290   1.934  -1.087  C01  V0B   6  
V0B  C02  C7   C  0  1  Y  N  N  -43.380  30.425  22.481  -6.165   1.208  -0.395  C02  V0B   7  
V0B  C03  C8   C  0  1  Y  N  N  -44.494  31.231  21.970  -6.060   1.253   1.005  C03  V0B   8  
V0B  C04  C9   C  0  1  Y  N  N  -44.885  32.476  22.664  -5.044   0.596   1.626  C04  V0B   9  
V0B  C05  C10  C  0  1  Y  N  N  -44.088  32.912  23.958  -4.111  -0.122   0.851  C05  V0B  10  
V0B  C07  C11  C  0  1  Y  N  N  -43.301  33.895  25.746  -2.486  -1.323   0.065  C07  V0B  11  
V0B  C08  C12  C  0  1  N  N  N  -43.105  34.886  26.874  -1.254  -2.189   0.005  C08  V0B  12  
V0B  C12  C13  C  0  1  N  N  N  -41.014  38.125  26.353   2.375  -1.038  -0.039  C12  V0B  13  
V0B  C14  C14  C  0  1  N  N  N  -39.546  40.222  26.417   4.763  -0.774  -0.089  C14  V0B  14  
V0B  C18  C15  C  0  1  N  N  N  -40.090  42.163  22.963   5.515   2.729   0.024  C18  V0B  15  
V0B  C19  C16  C  0  1  N  N  N  -41.086  41.258  22.282   4.232   3.292   0.075  C19  V0B  16  
V0B  C23  C17  C  0  1  Y  N  N  -42.548  32.741  25.530  -3.210  -0.908  -0.998  C23  V0B  17  
V0B  C25  C18  C  0  1  Y  N  N  -42.629  30.847  23.714  -5.267   0.512  -1.123  C25  V0B  18  
V0B  N06  N1   N  0  1  Y  N  N  -44.230  33.995  24.783  -3.045  -0.839   1.177  N06  V0B  19  
V0B  N09  N2   N  0  1  N  N  N  -42.509  36.068  26.292  -0.060  -1.340   0.010  N09  V0B  20  
V0B  N16  N3   N  0  1  N  N  N  -40.040  40.566  25.063   4.583   0.563  -0.035  N16  V0B  21  
V0B  N22  N4   N  0  1  N  N  N  -41.511  38.463  25.046   2.252   0.286   0.013  N22  V0B  22  
V0B  N24  N5   N  0  1  Y  N  N  -43.038  32.138  24.437  -4.240  -0.148  -0.513  N24  V0B  23  
V0B  O11  O1   O  0  1  N  N  N  -41.212  36.701  28.114   1.279  -3.108  -0.086  O11  V0B  24  
V0B  O15  O2   O  0  1  N  N  N  -38.749  40.902  26.990   5.888  -1.246  -0.131  O15  V0B  25  
V0B  H1   H1   H  0  1  N  N  N  -39.714  38.724  28.074   3.754  -2.686  -0.138  H1   V0B  26  
V0B  H3   H3   H  0  1  N  N  N  -38.842  42.467  24.840   6.659   0.962  -0.067  H3   V0B  27  
V0B  H4   H4   H  0  1  N  N  N  -42.284  39.361  22.467   2.146   2.897   0.112  H4   V0B  28  
V0B  H5   H5   H  0  1  N  N  N  -42.220  29.370  20.995  -8.150   1.271  -1.178  H5   V0B  29  
V0B  H6   H6   H  0  1  N  N  N  -42.563  28.425  22.484  -7.568   2.812  -0.504  H6   V0B  30  
V0B  H7   H7   H  0  1  N  N  N  -43.862  28.699  21.275  -6.965   2.246  -2.079  H7   V0B  31  
V0B  H8   H8   H  0  1  N  N  N  -45.029  30.915  21.087  -6.783   1.808   1.586  H8   V0B  32  
V0B  H9   H9   H  0  1  N  N  N  -45.702  33.078  22.293  -4.953   0.624   2.702  H9   V0B  33  
V0B  H10  H10  H  0  1  N  N  N  -44.074  35.136  27.331  -1.233  -2.851   0.870  H10  V0B  34  
V0B  H11  H11  H  0  1  N  N  N  -42.437  34.462  27.639  -1.272  -2.784  -0.908  H11  V0B  35  
V0B  H12  H12  H  0  1  N  N  N  -39.749  43.059  22.465   6.384   3.370   0.029  H12  V0B  36  
V0B  H13  H13  H  0  1  N  N  N  -41.452  41.512  21.298   4.110   4.364   0.117  H13  V0B  37  
V0B  H14  H14  H  0  1  N  N  N  -41.721  32.396  26.133  -3.013  -1.134  -2.035  H14  V0B  38  
V0B  H15  H15  H  0  1  N  N  N  -41.811  30.248  24.087  -5.360   0.479  -2.199  H15  V0B  39  
V0B  H16  H16  H  0  1  N  N  N  -42.763  36.326  25.360  -0.152  -0.375   0.048  H16  V0B  40  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V0B  C01  C02  SING  N  N   1  
V0B  C03  C02  SING  Y  N   2  
V0B  C03  C04  DOUB  Y  N   3  
V0B  C19  C20  DOUB  N  N   4  
V0B  C19  C18  SING  N  N   5  
V0B  C02  C25  DOUB  Y  N   6  
V0B  C04  C05  SING  Y  N   7  
V0B  C20  C21  SING  N  N   8  
V0B  C18  C17  DOUB  N  N   9  
V0B  C25  N24  SING  Y  N  10  
V0B  C05  N24  SING  Y  N  11  
V0B  C05  N06  DOUB  Y  N  12  
V0B  C17  N16  SING  N  N  13  
V0B  C21  N22  DOUB  N  N  14  
V0B  C21  N16  SING  N  N  15  
V0B  N24  C23  SING  Y  N  16  
V0B  N06  C07  SING  Y  N  17  
V0B  N22  C12  SING  N  N  18  
V0B  N16  C14  SING  N  N  19  
V0B  C23  C07  DOUB  Y  N  20  
V0B  C07  C08  SING  N  N  21  
V0B  N09  C08  SING  N  N  22  
V0B  N09  C10  SING  N  N  23  
V0B  C12  C10  SING  N  N  24  
V0B  C12  C13  DOUB  N  N  25  
V0B  C14  O15  DOUB  N  N  26  
V0B  C14  C13  SING  N  N  27  
V0B  C10  O11  DOUB  N  N  28  
V0B  C13  H1   SING  N  N  29  
V0B  C17  H3   SING  N  N  30  
V0B  C20  H4   SING  N  N  31  
V0B  C01  H5   SING  N  N  32  
V0B  C01  H6   SING  N  N  33  
V0B  C01  H7   SING  N  N  34  
V0B  C03  H8   SING  N  N  35  
V0B  C04  H9   SING  N  N  36  
V0B  C08  H10  SING  N  N  37  
V0B  C08  H11  SING  N  N  38  
V0B  C18  H12  SING  N  N  39  
V0B  C19  H13  SING  N  N  40  
V0B  C23  H14  SING  N  N  41  
V0B  C25  H15  SING  N  N  42  
V0B  N09  H16  SING  N  N  43  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V0B  InChI             InChI                 1.03   "InChI=1S/C18H15N5O2/c1-12-5-6-15-20-13(11-22(15)10-12)9-19-18(25)14-8-17(24)23-7-3-2-4-16(23)21-14/h2-8,10-11H,9H2,1H3,(H,19,25)"  
V0B  InChIKey          InChI                 1.03   HGTYDECGVDYGCR-UHFFFAOYSA-N  
V0B  SMILES_CANONICAL  CACTVS                3.385  "Cc1ccc2nc(CNC(=O)C3=CC(=O)N4C=CC=CC4=N3)cn2c1"  
V0B  SMILES            CACTVS                3.385  "Cc1ccc2nc(CNC(=O)C3=CC(=O)N4C=CC=CC4=N3)cn2c1"  
V0B  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc2nc(cn2c1)CNC(=O)C3=CC(=O)N4C=CC=CC4=N3"  
V0B  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc2nc(cn2c1)CNC(=O)C3=CC(=O)N4C=CC=CC4=N3"  
#
_pdbx_chem_comp_identifier.comp_id          V0B
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(6-methylimidazo[1,2-a]pyridin-2-yl)methyl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     V0B
_pdbx_chem_comp_synonyms.name        "~{N}-[(6-methylimidazo[1,2-a]pyridin-2-yl)methyl]-4-oxidanylidene-pyrido[1,2-a]pyrimidine-2-carboxamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V0B  "Create component"  2021-03-31  PDBE  
V0B  "Initial release"   2021-04-07  RCSB  
##
