data_XFB
# 
_chem_comp.id                                    XFB 
_chem_comp.name                                  SKI-O-592 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H27 N7 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "cyclopropyl-[1-methyl-5-[[4-[3-methyl-4-[[(4S)-4-oxidanyl-1,2-oxazolidin-2-yl]methyl]pyrazol-1-yl]pyrimidin-2-yl]amino]indol-3-yl]methanone" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-01 
_chem_comp.pdbx_modified_date                    2024-11-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        473.527 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XFB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8WYW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XFB C1  C1  C 0 1 Y N N N N N -6.949  1.039  35.556 -5.478 1.949  -0.205 C1  XFB 1  
XFB C10 C2  C 0 1 N N N N N N -10.630 0.878  32.333 -6.710 -2.620 -0.977 C10 XFB 2  
XFB C11 C3  C 0 1 N N N N N N -10.779 0.805  30.812 -6.426 -3.924 -1.727 C11 XFB 3  
XFB C12 C4  C 0 1 N N N N N N -11.791 0.084  31.721 -6.709 -3.951 -0.223 C12 XFB 4  
XFB C13 C5  C 0 1 N N N N N N -7.477  3.297  36.061 -7.899 2.650  -0.296 C13 XFB 5  
XFB C14 C6  C 0 1 Y N N N N N -5.339  -3.936 34.728 -0.663 0.839  0.703  C14 XFB 6  
XFB C15 C7  C 0 1 Y N N N N N -6.478  -5.074 33.058 1.312  -0.214 1.252  C15 XFB 7  
XFB C16 C8  C 0 1 Y N N N N N -5.671  -6.156 33.242 0.582  -1.257 1.821  C16 XFB 8  
XFB C17 C9  C 0 1 Y N N N N N -4.682  -6.103 34.174 -0.799 -1.188 1.790  C17 XFB 9  
XFB C18 C10 C 0 1 Y N N N N N -8.448  -4.224 31.705 3.530  0.708  0.742  C18 XFB 10 
XFB C19 C11 C 0 1 Y N N N N N -9.243  -4.780 30.715 4.804  0.310  0.960  C19 XFB 11 
XFB C2  C12 C 0 1 Y N N N N N -5.899  0.778  36.389 -4.784 3.133  0.023  C2  XFB 12 
XFB C20 C13 C 0 1 Y N N N N N -8.797  -6.074 30.506 4.763  -0.918 1.631  C20 XFB 13 
XFB C21 C14 C 0 1 N N N N N N -9.391  -7.082 29.503 5.959  -1.722 2.071  C21 XFB 14 
XFB C22 C15 C 0 1 N N N N N N -10.469 -4.169 29.942 6.048  1.056  0.552  C22 XFB 15 
XFB C23 C16 C 0 1 N N N N N N -10.962 -1.525 27.796 7.997  -1.146 -1.552 C23 XFB 16 
XFB C24 C17 C 0 1 N N S N N N -9.526  -1.679 27.860 8.705  0.208  -1.783 C24 XFB 17 
XFB C25 C18 C 0 1 N N N N N N -9.185  -2.646 28.930 7.744  1.253  -1.180 C25 XFB 18 
XFB C3  C19 C 0 1 Y N N N N N -5.312  -0.475 36.393 -3.411 3.118  0.132  C3  XFB 19 
XFB C4  C20 C 0 1 Y N N N N N -5.780  -1.481 35.523 -2.705 1.923  0.018  C4  XFB 20 
XFB C5  C21 C 0 1 Y N N N N N -6.883  -1.234 34.652 -3.381 0.735  -0.209 C5  XFB 21 
XFB C6  C22 C 0 1 Y N N N N N -7.470  0.046  34.667 -4.768 0.744  -0.321 C6  XFB 22 
XFB C7  C23 C 0 1 Y N N N N N -8.633  2.007  34.471 -7.003 0.342  -0.563 C7  XFB 23 
XFB C8  C24 C 0 1 Y N N N N N -8.573  0.720  33.972 -5.783 -0.301 -0.556 C8  XFB 24 
XFB C9  C25 C 0 1 N N N N N N -9.458  0.061  32.904 -5.551 -1.686 -0.742 C9  XFB 25 
XFB N1  N1  N 0 1 Y N N N N N -7.715  2.049  35.312 -6.821 1.659  -0.352 N1  XFB 26 
XFB N2  N2  N 0 1 N N N N N N -5.101  -2.777 35.584 -1.310 1.921  0.131  N2  XFB 27 
XFB N3  N3  N 0 1 Y N N N N N -6.321  -3.983 33.799 0.661  0.807  0.707  N3  XFB 28 
XFB N4  N4  N 0 1 Y N N N N N -4.524  -5.003 34.901 -1.383 -0.138 1.235  N4  XFB 29 
XFB N5  N5  N 0 1 Y N N N N N -7.534  -5.159 32.053 2.707  -0.241 1.260  N5  XFB 30 
XFB N6  N6  N 0 1 Y N N N N N -7.759  -6.313 31.306 3.511  -1.248 1.811  N6  XFB 31 
XFB N7  N7  N 0 1 N N N N N N -10.364 -2.981 29.509 6.588  0.470  -0.682 N7  XFB 32 
XFB O1  O1  O 0 1 N N N N N N -9.236  -1.062 32.537 -4.417 -2.121 -0.712 O1  XFB 33 
XFB O2  O2  O 0 1 N N N N N N -11.422 -2.653 28.615 7.111  -0.890 -0.438 O2  XFB 34 
XFB O3  O3  O 0 1 N N N N N N -8.865  -0.373 28.106 8.887  0.444  -3.181 O3  XFB 35 
XFB H1  H1  H 0 1 N N N N N N -10.869 1.833  32.824 -7.673 -2.140 -1.150 H1  XFB 36 
XFB H2  H2  H 0 1 N N N N N N -10.061 0.222  30.216 -7.203 -4.301 -2.392 H2  XFB 37 
XFB H3  H3  H 0 1 N N N N N N -11.086 1.697  30.246 -5.401 -4.106 -2.050 H3  XFB 38 
XFB H4  H4  H 0 1 N N N N N N -12.821 0.461  31.806 -5.870 -4.152 0.443  H4  XFB 39 
XFB H5  H5  H 0 1 N N N N N N -11.797 -1.015 31.776 -7.672 -4.347 0.101  H5  XFB 40 
XFB H6  H6  H 0 1 N N N N N N -6.635  3.154  36.754 -8.251 2.745  0.732  H6  XFB 41 
XFB H7  H7  H 0 1 N N N N N N -7.238  4.107  35.357 -7.525 3.613  -0.643 H7  XFB 42 
XFB H8  H8  H 0 1 N N N N N N -8.380  3.561  36.631 -8.722 2.328  -0.933 H8  XFB 43 
XFB H9  H9  H 0 1 N N N N N N -5.816  -7.049 32.652 1.083  -2.101 2.271  H9  XFB 44 
XFB H10 H10 H 0 1 N N N N N N -4.029  -6.950 34.322 -1.395 -1.979 2.222  H10 XFB 45 
XFB H11 H11 H 0 1 N N N N N N -8.541  -3.231 32.120 3.222  1.619  0.249  H11 XFB 46 
XFB H12 H12 H 0 1 N N N N N N -5.526  1.550  37.045 -5.322 4.065  0.113  H12 XFB 47 
XFB H13 H13 H 0 1 N N N N N N -8.826  -8.025 29.551 6.247  -1.423 3.079  H13 XFB 48 
XFB H14 H14 H 0 1 N N N N N N -10.445 -7.273 29.755 5.707  -2.782 2.065  H14 XFB 49 
XFB H15 H15 H 0 1 N N N N N N -9.327  -6.668 28.486 6.789  -1.542 1.388  H15 XFB 50 
XFB H16 H16 H 0 1 N N N N N N -11.332 -4.194 30.624 5.803  2.104  0.380  H16 XFB 51 
XFB H17 H17 H 0 1 N N N N N N -10.667 -4.817 29.076 6.792  0.983  1.345  H17 XFB 52 
XFB H18 H18 H 0 1 N N N N N N -11.281 -0.563 28.224 7.427  -1.435 -2.435 H18 XFB 53 
XFB H19 H19 H 0 1 N N N N N N -11.328 -1.606 26.762 8.722  -1.918 -1.294 H19 XFB 54 
XFB H20 H20 H 0 1 N N N N N N -9.165  -2.078 26.900 9.665  0.228  -1.267 H20 XFB 55 
XFB H21 H21 H 0 1 N N N N N N -8.701  -3.536 28.503 8.226  1.781  -0.358 H21 XFB 56 
XFB H22 H22 H 0 1 N N N N N N -8.514  -2.182 29.667 7.422  1.958  -1.947 H22 XFB 57 
XFB H23 H23 H 0 1 N N N N N N -4.492  -0.683 37.065 -2.878 4.040  0.309  H23 XFB 58 
XFB H24 H24 H 0 1 N N N N N N -7.258  -2.008 33.999 -2.835 -0.192 -0.299 H24 XFB 59 
XFB H25 H25 H 0 1 N N N N N N -9.318  2.795  34.195 -7.959 -0.139 -0.708 H25 XFB 60 
XFB H26 H26 H 0 1 N N N N N N -4.398  -2.879 36.288 -0.797 2.679  -0.190 H26 XFB 61 
XFB H27 H27 H 0 1 N N N N N N -7.924  -0.496 28.144 9.439  -0.216 -3.623 H27 XFB 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XFB C23 C24 SING N N 1  
XFB C23 O2  SING N N 2  
XFB C24 O3  SING N N 3  
XFB C24 C25 SING N N 4  
XFB O2  N7  SING N N 5  
XFB C25 N7  SING N N 6  
XFB C21 C20 SING N N 7  
XFB N7  C22 SING N N 8  
XFB C22 C19 SING N N 9  
XFB C20 C19 SING Y N 10 
XFB C20 N6  DOUB Y N 11 
XFB C19 C18 DOUB Y N 12 
XFB C11 C12 SING N N 13 
XFB C11 C10 SING N N 14 
XFB N6  N5  SING Y N 15 
XFB C18 N5  SING Y N 16 
XFB C12 C10 SING N N 17 
XFB N5  C15 SING N N 18 
XFB C10 C9  SING N N 19 
XFB O1  C9  DOUB N N 20 
XFB C9  C8  SING N N 21 
XFB C15 C16 DOUB Y N 22 
XFB C15 N3  SING Y N 23 
XFB C16 C17 SING Y N 24 
XFB N3  C14 DOUB Y N 25 
XFB C8  C7  DOUB Y N 26 
XFB C8  C6  SING Y N 27 
XFB C17 N4  DOUB Y N 28 
XFB C7  N1  SING Y N 29 
XFB C5  C6  DOUB Y N 30 
XFB C5  C4  SING Y N 31 
XFB C6  C1  SING Y N 32 
XFB C14 N4  SING Y N 33 
XFB C14 N2  SING N N 34 
XFB N1  C1  SING Y N 35 
XFB N1  C13 SING N N 36 
XFB C4  N2  SING N N 37 
XFB C4  C3  DOUB Y N 38 
XFB C1  C2  DOUB Y N 39 
XFB C2  C3  SING Y N 40 
XFB C10 H1  SING N N 41 
XFB C11 H2  SING N N 42 
XFB C11 H3  SING N N 43 
XFB C12 H4  SING N N 44 
XFB C12 H5  SING N N 45 
XFB C13 H6  SING N N 46 
XFB C13 H7  SING N N 47 
XFB C13 H8  SING N N 48 
XFB C16 H9  SING N N 49 
XFB C17 H10 SING N N 50 
XFB C18 H11 SING N N 51 
XFB C2  H12 SING N N 52 
XFB C21 H13 SING N N 53 
XFB C21 H14 SING N N 54 
XFB C21 H15 SING N N 55 
XFB C22 H16 SING N N 56 
XFB C22 H17 SING N N 57 
XFB C23 H18 SING N N 58 
XFB C23 H19 SING N N 59 
XFB C24 H20 SING N N 60 
XFB C25 H21 SING N N 61 
XFB C25 H22 SING N N 62 
XFB C3  H23 SING N N 63 
XFB C5  H24 SING N N 64 
XFB C7  H25 SING N N 65 
XFB N2  H26 SING N N 66 
XFB O3  H27 SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XFB InChI            InChI                1.06  "InChI=1S/C25H27N7O3/c1-15-17(10-31-12-19(33)14-35-31)11-32(29-15)23-7-8-26-25(28-23)27-18-5-6-22-20(9-18)21(13-30(22)2)24(34)16-3-4-16/h5-9,11,13,16,19,33H,3-4,10,12,14H2,1-2H3,(H,26,27,28)/t19-/m0/s1" 
XFB InChIKey         InChI                1.06  YCZUBLQESBVOSH-IBGZPJMESA-N                                                                                                                                                                                
XFB SMILES_CANONICAL CACTVS               3.385 "Cn1cc(C(=O)C2CC2)c3cc(Nc4nccc(n4)n5cc(CN6C[C@H](O)CO6)c(C)n5)ccc13"                                                                                                                                       
XFB SMILES           CACTVS               3.385 "Cn1cc(C(=O)C2CC2)c3cc(Nc4nccc(n4)n5cc(CN6C[CH](O)CO6)c(C)n5)ccc13"                                                                                                                                        
XFB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cn(n1)c2ccnc(n2)Nc3ccc4c(c3)c(cn4C)C(=O)C5CC5)CN6C[C@@H](CO6)O"                                                                                                                                      
XFB SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(cn(n1)c2ccnc(n2)Nc3ccc4c(c3)c(cn4C)C(=O)C5CC5)CN6CC(CO6)O"                                                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           XFB 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "cyclopropyl-[1-methyl-5-[[4-[3-methyl-4-[[(4~{S})-4-oxidanyl-1,2-oxazolidin-2-yl]methyl]pyrazol-1-yl]pyrimidin-2-yl]amino]indol-3-yl]methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XFB "Create component" 2023-11-01 PDBJ 
XFB "Initial release"  2024-11-06 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      XFB 
_pdbx_chem_comp_synonyms.name         "cyclopropyl-[1-methyl-5-[[4-[3-methyl-4-[[(4S)-4-oxidanyl-1,2-oxazolidin-2-yl]methyl]pyrazol-1-yl]pyrimidin-2-yl]amino]indol-3-yl]methanone" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
