data_YUB
# 
_chem_comp.id                                    YUB 
_chem_comp.name                                  "(8R)-2-{[(2-chlorophenyl)methyl]amino}-5-[(2-fluoroanilino)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H16 Cl F N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-21 
_chem_comp.pdbx_modified_date                    2024-02-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        398.821 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YUB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FUO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YUB C15  C1  C  0 1 N N N N N N 10.764 9.935  20.363 -4.334 -0.736 -0.139 C15  YUB 1  
YUB C16  C2  C  0 1 Y N N N N N 9.249  10.755 22.259 -6.011 1.119  -0.278 C16  YUB 2  
YUB C17  C3  C  0 1 Y N N N N N 16.125 16.626 17.007 6.216  1.740  -0.246 C17  YUB 3  
YUB C18  C4  C  0 1 N N N N N N 16.558 15.168 20.393 3.969  -1.185 0.465  C18  YUB 4  
YUB C21  C5  C  0 1 Y N N N N N 11.476 10.107 22.787 -6.432 -0.697 1.226  C21  YUB 5  
YUB C22  C6  C  0 1 Y N N N N N 17.526 14.823 17.657 6.658  -0.378 0.804  C22  YUB 6  
YUB C23  C7  C  0 1 Y N N N N N 9.018  11.074 23.586 -7.202 1.711  0.104  C23  YUB 7  
YUB C24  C8  C  0 1 Y N N N N N 16.512 16.514 15.696 7.536  2.105  -0.056 C24  YUB 8  
YUB C25  C9  C  0 1 Y N N N N N 11.254 10.434 24.116 -7.619 -0.102 1.612  C25  YUB 9  
YUB C26  C10 C  0 1 Y N N N N N 17.435 15.541 15.366 8.414  1.233  0.561  C26  YUB 10 
YUB C27  C11 C  0 1 Y N N N N N 10.026 10.909 24.515 -8.005 1.100  1.048  C27  YUB 11 
YUB C28  C12 C  0 1 Y N N N N N 17.944 14.705 16.341 7.975  -0.007 0.990  C28  YUB 12 
YUB C12  C13 C  0 1 Y N N N N N 10.486 10.265 21.823 -5.628 -0.087 0.281  C12  YUB 13 
YUB C14  C14 C  0 1 Y N N N N N 16.595 15.799 18.007 5.772  0.496  0.190  C14  YUB 14 
YUB C2   C15 C  0 1 Y N N N N N 14.264 12.209 20.322 0.249  -0.664 0.475  C2   YUB 15 
YUB C5   C16 C  0 1 N N N N N N 16.563 11.389 20.387 0.721  -2.408 -1.025 C5   YUB 16 
YUB C6   C17 C  0 1 Y N N N N N 13.240 10.388 20.315 -1.913 -0.530 0.334  C6   YUB 17 
YUB C7   C18 C  0 1 N N N N N N 16.946 12.744 20.384 2.096  -2.274 -0.735 C7   YUB 18 
YUB C9   C19 C  0 1 N N N N N N 16.045 13.765 20.362 2.503  -1.336 0.149  C9   YUB 19 
YUB F20  F1  F  0 1 N N N N N N 15.230 17.575 17.358 5.359  2.592  -0.849 F20  YUB 20 
YUB N1   N1  N  0 1 Y N N N N N 15.166 11.206 20.358 -0.168 -1.604 -0.416 N1   YUB 21 
YUB N10  N2  N  0 1 N N N N N N 12.147 9.480  20.286 -3.217 -0.097 0.562  N10  YUB 22 
YUB N11  N3  N  0 1 N N N N N N 16.129 15.962 19.273 4.436  0.125  0.005  N11  YUB 23 
YUB N3   N4  N  0 1 Y N N N N N 13.018 11.740 20.302 -0.818 -0.027 0.912  N3   YUB 24 
YUB N4   N5  N  0 1 Y N N N N N 14.504 9.990  20.343 -1.564 -1.492 -0.489 N4   YUB 25 
YUB N8   N6  N  0 1 N N N N N N 14.694 13.495 20.319 1.589  -0.528 0.756  N8   YUB 26 
YUB O13  O1  O  0 1 N N N N N N 17.328 10.423 20.401 0.342  -3.250 -1.820 O13  YUB 27 
YUB CL19 CL1 CL 0 0 N N N N N N 7.967  10.992 21.135 -5.002 1.885  -1.465 CL19 YUB 28 
YUB H33  H1  H  0 1 N N N N N N 10.626 10.831 19.740 -4.361 -1.796 0.111  H33  YUB 29 
YUB H34  H2  H  0 1 N N N N N N 10.085 9.141  20.019 -4.202 -0.619 -1.215 H34  YUB 30 
YUB H36  H3  H  0 1 N N N N N N 16.202 15.648 21.316 4.119  -1.267 1.542  H36  YUB 31 
YUB H35  H4  H  0 1 N N N N N N 17.658 15.136 20.396 4.532  -1.969 -0.041 H35  YUB 32 
YUB H37  H5  H  0 1 N N N N N N 12.441 9.720  22.493 -6.130 -1.636 1.667  H37  YUB 33 
YUB H38  H6  H  0 1 N N N N N N 17.922 14.159 18.411 6.317  -1.346 1.139  H38  YUB 34 
YUB H39  H7  H  0 1 N N N N N N 8.053  11.450 23.893 -7.504 2.650  -0.336 H39  YUB 35 
YUB H40  H8  H  0 1 N N N N N N 16.105 17.170 14.941 7.882  3.072  -0.390 H40  YUB 36 
YUB H41  H9  H  0 1 N N N N N N 12.047 10.316 24.840 -8.244 -0.577 2.353  H41  YUB 37 
YUB H42  H10 H  0 1 N N N N N N 17.760 15.433 14.342 9.445  1.520  0.709  H42  YUB 38 
YUB H43  H11 H  0 1 N N N N N N 9.851  11.152 25.553 -8.934 1.562  1.347  H43  YUB 39 
YUB H44  H12 H  0 1 N N N N N N 18.673 13.954 16.076 8.665  -0.687 1.468  H44  YUB 40 
YUB H29  H13 H  0 1 N N N N N N 17.999 12.984 20.400 2.818  -2.918 -1.216 H29  YUB 41 
YUB H31  H14 H  0 1 N N N N N N 12.227 8.972  19.428 -3.386 0.627  1.184  H31  YUB 42 
YUB H32  H15 H  0 1 N N N N N N 15.138 15.838 19.216 3.818  0.736  -0.427 H32  YUB 43 
YUB H30  H16 H  0 1 N N N N N N 14.033 14.245 20.286 1.883  0.146  1.389  H30  YUB 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YUB N1  C2   SING Y N 1  
YUB N1  N4   SING Y N 2  
YUB N1  C5   SING N N 3  
YUB C2  N3   DOUB Y N 4  
YUB C2  N8   SING N N 5  
YUB N3  C6   SING Y N 6  
YUB N4  C6   DOUB Y N 7  
YUB C5  C7   SING N N 8  
YUB C5  O13  DOUB N N 9  
YUB C6  N10  SING N N 10 
YUB C7  C9   DOUB N N 11 
YUB N8  C9   SING N N 12 
YUB C9  C18  SING N N 13 
YUB N10 C15  SING N N 14 
YUB N11 C18  SING N N 15 
YUB N11 C14  SING N N 16 
YUB C12 C15  SING N N 17 
YUB C12 C16  DOUB Y N 18 
YUB C12 C21  SING Y N 19 
YUB C14 C17  DOUB Y N 20 
YUB C14 C22  SING Y N 21 
YUB C16 CL19 SING N N 22 
YUB C16 C23  SING Y N 23 
YUB C17 F20  SING N N 24 
YUB C17 C24  SING Y N 25 
YUB C21 C25  DOUB Y N 26 
YUB C22 C28  DOUB Y N 27 
YUB C23 C27  DOUB Y N 28 
YUB C24 C26  DOUB Y N 29 
YUB C25 C27  SING Y N 30 
YUB C26 C28  SING Y N 31 
YUB C15 H33  SING N N 32 
YUB C15 H34  SING N N 33 
YUB C18 H36  SING N N 34 
YUB C18 H35  SING N N 35 
YUB C21 H37  SING N N 36 
YUB C22 H38  SING N N 37 
YUB C23 H39  SING N N 38 
YUB C24 H40  SING N N 39 
YUB C25 H41  SING N N 40 
YUB C26 H42  SING N N 41 
YUB C27 H43  SING N N 42 
YUB C28 H44  SING N N 43 
YUB C7  H29  SING N N 44 
YUB N10 H31  SING N N 45 
YUB N11 H32  SING N N 46 
YUB N8  H30  SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YUB SMILES           ACDLabs              12.01 "Fc1ccccc1NCC1=CC(=O)n2nc(nc2N1)NCc1ccccc1Cl"                                                                                                     
YUB InChI            InChI                1.06  "InChI=1S/C19H16ClFN6O/c20-14-6-2-1-5-12(14)10-23-18-25-19-24-13(9-17(28)27(19)26-18)11-22-16-8-4-3-7-15(16)21/h1-9,22H,10-11H2,(H2,23,24,25,26)" 
YUB InChIKey         InChI                1.06  WBXJTDUOPQEFCN-UHFFFAOYSA-N                                                                                                                       
YUB SMILES_CANONICAL CACTVS               3.385 "Fc1ccccc1NCC2=CC(=O)n3nc(NCc4ccccc4Cl)nc3N2"                                                                                                     
YUB SMILES           CACTVS               3.385 "Fc1ccccc1NCC2=CC(=O)n3nc(NCc4ccccc4Cl)nc3N2"                                                                                                     
YUB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CNc2nc3n(n2)C(=O)C=C(N3)CNc4ccccc4F)Cl"                                                                                               
YUB SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CNc2nc3n(n2)C(=O)C=C(N3)CNc4ccccc4F)Cl"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YUB "SYSTEMATIC NAME" ACDLabs              12.01 "(8R)-2-{[(2-chlorophenyl)methyl]amino}-5-[(2-fluoroanilino)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one"   
YUB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(2-chlorophenyl)methylamino]-5-[[(2-fluorophenyl)amino]methyl]-4~{H}-[1,2,4]triazolo[1,5-a]pyrimidin-7-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YUB "Create component" 2023-02-21 RCSB 
YUB "Initial release"  2024-02-21 RCSB 
# 
