data_YIC
#

_chem_comp.id                                   YIC
_chem_comp.name                                 "(2S)-2-[[(2S)-1-(3-cyclopentylpropanoyl)piperidin-2-yl]carbonylamino]-3-phenyl-propanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H32 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-08
_chem_comp.pdbx_modified_date                   2020-09-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       400.511
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YIC
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6L1B
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YIC  O15  O1   O  0  1  N  N  N  -10.815   6.634  22.850  -0.321   0.242   0.457  O15  YIC   1  
YIC  C14  C1   C  0  1  N  N  N  -11.385   5.864  23.622  -0.939   1.172  -0.016  C14  YIC   2  
YIC  C16  C2   C  0  1  N  N  N  -11.070   4.389  23.564  -2.441   1.219   0.108  C16  YIC   3  
YIC  C17  C3   C  0  1  N  N  N   -9.985   4.055  22.521  -2.929  -0.015   0.869  C17  YIC   4  
YIC  C18  C4   C  0  1  N  N  N  -10.659   3.522  21.254  -4.453   0.033   0.996  C18  YIC   5  
YIC  C22  C5   C  0  1  N  N  N   -9.669   3.030  20.179  -4.963  -1.161   1.828  C22  YIC   6  
YIC  C21  C6   C  0  1  N  N  N  -10.499   3.068  18.868  -6.283  -1.616   1.180  C21  YIC   7  
YIC  C20  C7   C  0  1  N  N  N  -11.752   3.931  19.143  -6.528  -0.682  -0.023  C20  YIC   8  
YIC  C19  C8   C  0  1  N  N  N  -11.564   4.529  20.558  -5.118  -0.154  -0.391  C19  YIC   9  
YIC  N13  N1   N  0  1  N  N  N  -12.296   6.279  24.545  -0.284   2.165  -0.649  N13  YIC  10  
YIC  C12  C9   C  0  1  N  N  N  -12.868   5.475  25.633  -1.025   3.228  -1.342  C12  YIC  11  
YIC  C11  C10  C  0  1  N  N  N  -14.398   5.491  25.622  -0.541   4.586  -0.821  C11  YIC  12  
YIC  C10  C11  C  0  1  N  N  N  -14.860   6.947  25.566   0.979   4.675  -0.976  C10  YIC  13  
YIC  C9   C12  C  0  1  N  N  N  -14.262   7.807  24.475   1.643   3.575  -0.145  C9   YIC  14  
YIC  C7   C13  C  0  1  N  N  S  -12.721   7.700  24.433   1.185   2.209  -0.653  C7   YIC  15  
YIC  C6   C14  C  0  1  N  N  N  -12.111   8.601  25.468   1.727   1.128   0.246  C6   YIC  16  
YIC  O8   O2   O  0  1  N  N  N  -12.626   9.686  25.621   1.459   1.132   1.429  O8   YIC  17  
YIC  N5   N2   N  0  1  N  N  N  -11.005   8.144  26.101   2.509   0.157  -0.264  N5   YIC  18  
YIC  C1   C15  C  0  1  N  N  S  -10.185   8.852  27.091   3.036  -0.895   0.609  C1   YIC  19  
YIC  C2   C16  C  0  1  N  N  N   -8.805   8.245  27.250   4.306  -0.415   1.263  C2   YIC  20  
YIC  O4   O3   O  0  1  N  N  N   -7.818   8.952  27.568   4.969  -1.217   2.111  O4   YIC  21  
YIC  O3   O4   O  0  1  N  N  N   -8.747   7.043  27.041   4.728   0.692   1.024  O3   YIC  22  
YIC  C23  C17  C  0  1  N  N  N  -10.904   8.663  28.408   3.330  -2.147  -0.219  C23  YIC  23  
YIC  C24  C18  C  0  1  Y  N  N  -10.335   9.396  29.607   2.042  -2.697  -0.773  C24  YIC  24  
YIC  C29  C19  C  0  1  Y  N  N  -10.459  10.778  29.724   1.581  -2.272  -2.005  C29  YIC  25  
YIC  C28  C20  C  0  1  Y  N  N   -9.909  11.388  30.888   0.398  -2.777  -2.513  C28  YIC  26  
YIC  C27  C21  C  0  1  Y  N  N   -9.342  10.591  31.900  -0.323  -3.708  -1.789  C27  YIC  27  
YIC  C26  C22  C  0  1  Y  N  N   -9.219   9.195  31.769   0.138  -4.134  -0.557  C26  YIC  28  
YIC  C25  C23  C  0  1  Y  N  N   -9.750   8.589  30.610   1.323  -3.632  -0.052  C25  YIC  29  
YIC  H1   H1   H  0  1  N  N  N  -11.989   3.843  23.304  -2.732   2.119   0.650  H1   YIC  30  
YIC  H2   H2   H  0  1  N  N  N  -10.718   4.065  24.554  -2.887   1.234  -0.886  H2   YIC  31  
YIC  H3   H3   H  0  1  N  N  N   -9.306   3.291  22.927  -2.637  -0.915   0.327  H3   YIC  32  
YIC  H4   H4   H  0  1  N  N  N   -9.413   4.963  22.280  -2.482  -0.029   1.863  H4   YIC  33  
YIC  H5   H5   H  0  1  N  N  N  -11.280   2.663  21.546  -4.768   0.975   1.446  H5   YIC  34  
YIC  H6   H6   H  0  1  N  N  N   -9.329   2.007  20.398  -4.236  -1.972   1.802  H6   YIC  35  
YIC  H7   H7   H  0  1  N  N  N   -8.799   3.699  20.112  -5.140  -0.850   2.858  H7   YIC  36  
YIC  H8   H8   H  0  1  N  N  N  -10.799   2.049  18.582  -6.194  -2.648   0.840  H8   YIC  37  
YIC  H9   H9   H  0  1  N  N  N   -9.904   3.515  18.058  -7.101  -1.527   1.895  H9   YIC  38  
YIC  H10  H10  H  0  1  N  N  N  -11.832   4.735  18.397  -6.957  -1.239  -0.857  H10  YIC  39  
YIC  H11  H11  H  0  1  N  N  N  -12.658   3.308  19.110  -7.180   0.144   0.261  H11  YIC  40  
YIC  H12  H12  H  0  1  N  N  N  -11.085   5.518  20.506  -5.187   0.796  -0.921  H12  YIC  41  
YIC  H13  H13  H  0  1  N  N  N  -12.529   4.616  21.079  -4.572  -0.889  -0.983  H13  YIC  42  
YIC  H14  H14  H  0  1  N  N  N  -12.524   4.436  25.524  -0.841   3.162  -2.414  H14  YIC  43  
YIC  H15  H15  H  0  1  N  N  N  -12.517   5.879  26.594  -2.091   3.118  -1.146  H15  YIC  44  
YIC  H16  H16  H  0  1  N  N  N  -14.782   5.013  26.535  -1.013   5.384  -1.394  H16  YIC  45  
YIC  H17  H17  H  0  1  N  N  N  -14.770   4.948  24.740  -0.807   4.688   0.231  H17  YIC  46  
YIC  H18  H18  H  0  1  N  N  N  -14.612   7.413  26.531   1.245   4.549  -2.025  H18  YIC  47  
YIC  H19  H19  H  0  1  N  N  N  -15.951   6.946  25.429   1.322   5.650  -0.628  H19  YIC  48  
YIC  H20  H20  H  0  1  N  N  N  -14.540   8.856  24.657   2.726   3.654  -0.237  H20  YIC  49  
YIC  H21  H21  H  0  1  N  N  N  -14.667   7.483  23.505   1.358   3.686   0.901  H21  YIC  50  
YIC  H22  H22  H  0  1  N  N  N  -12.401   8.067  23.447   1.546   2.057  -1.670  H22  YIC  51  
YIC  H23  H23  H  0  1  N  N  N  -10.713   7.217  25.867   2.723   0.154  -1.211  H23  YIC  52  
YIC  H24  H24  H  0  1  N  N  N  -10.107   9.922  26.847   2.299  -1.132   1.377  H24  YIC  53  
YIC  H25  H25  H  0  1  N  N  N   -7.041   8.408  27.617   5.779  -0.865   2.506  H25  YIC  54  
YIC  H26  H26  H  0  1  N  N  N  -11.942   9.001  28.272   3.999  -1.889  -1.041  H26  YIC  55  
YIC  H27  H27  H  0  1  N  N  N  -10.896   7.588  28.640   3.805  -2.898   0.413  H27  YIC  56  
YIC  H28  H28  H  0  1  N  N  N  -10.952  11.364  28.963   2.144  -1.544  -2.570  H28  YIC  57  
YIC  H29  H29  H  0  1  N  N  N   -9.927  12.463  30.994   0.038  -2.444  -3.475  H29  YIC  58  
YIC  H30  H30  H  0  1  N  N  N   -8.991  11.065  32.805  -1.247  -4.102  -2.185  H30  YIC  59  
YIC  H31  H31  H  0  1  N  N  N   -8.733   8.605  32.532  -0.426  -4.861   0.009  H31  YIC  60  
YIC  H32  H32  H  0  1  N  N  N   -9.710   7.516  30.490   1.685  -3.968   0.909  H32  YIC  61  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YIC  C21  C20  SING  N  N   1  
YIC  C21  C22  SING  N  N   2  
YIC  C20  C19  SING  N  N   3  
YIC  C22  C18  SING  N  N   4  
YIC  C19  C18  SING  N  N   5  
YIC  C18  C17  SING  N  N   6  
YIC  C17  C16  SING  N  N   7  
YIC  O15  C14  DOUB  N  N   8  
YIC  C16  C14  SING  N  N   9  
YIC  C14  N13  SING  N  N  10  
YIC  C7   C9   SING  N  N  11  
YIC  C7   N13  SING  N  N  12  
YIC  C7   C6   SING  N  N  13  
YIC  C9   C10  SING  N  N  14  
YIC  N13  C12  SING  N  N  15  
YIC  C6   O8   DOUB  N  N  16  
YIC  C6   N5   SING  N  N  17  
YIC  C10  C11  SING  N  N  18  
YIC  C11  C12  SING  N  N  19  
YIC  N5   C1   SING  N  N  20  
YIC  O3   C2   DOUB  N  N  21  
YIC  C1   C2   SING  N  N  22  
YIC  C1   C23  SING  N  N  23  
YIC  C2   O4   SING  N  N  24  
YIC  C23  C24  SING  N  N  25  
YIC  C24  C29  DOUB  Y  N  26  
YIC  C24  C25  SING  Y  N  27  
YIC  C29  C28  SING  Y  N  28  
YIC  C25  C26  DOUB  Y  N  29  
YIC  C28  C27  DOUB  Y  N  30  
YIC  C26  C27  SING  Y  N  31  
YIC  C16  H1   SING  N  N  32  
YIC  C16  H2   SING  N  N  33  
YIC  C17  H3   SING  N  N  34  
YIC  C17  H4   SING  N  N  35  
YIC  C18  H5   SING  N  N  36  
YIC  C22  H6   SING  N  N  37  
YIC  C22  H7   SING  N  N  38  
YIC  C21  H8   SING  N  N  39  
YIC  C21  H9   SING  N  N  40  
YIC  C20  H10  SING  N  N  41  
YIC  C20  H11  SING  N  N  42  
YIC  C19  H12  SING  N  N  43  
YIC  C19  H13  SING  N  N  44  
YIC  C12  H14  SING  N  N  45  
YIC  C12  H15  SING  N  N  46  
YIC  C11  H16  SING  N  N  47  
YIC  C11  H17  SING  N  N  48  
YIC  C10  H18  SING  N  N  49  
YIC  C10  H19  SING  N  N  50  
YIC  C9   H20  SING  N  N  51  
YIC  C9   H21  SING  N  N  52  
YIC  C7   H22  SING  N  N  53  
YIC  N5   H23  SING  N  N  54  
YIC  C1   H24  SING  N  N  55  
YIC  O4   H25  SING  N  N  56  
YIC  C23  H26  SING  N  N  57  
YIC  C23  H27  SING  N  N  58  
YIC  C29  H28  SING  N  N  59  
YIC  C28  H29  SING  N  N  60  
YIC  C27  H30  SING  N  N  61  
YIC  C26  H31  SING  N  N  62  
YIC  C25  H32  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YIC  InChI             InChI                 1.03   "InChI=1S/C23H32N2O4/c26-21(14-13-17-8-4-5-9-17)25-15-7-6-12-20(25)22(27)24-19(23(28)29)16-18-10-2-1-3-11-18/h1-3,10-11,17,19-20H,4-9,12-16H2,(H,24,27)(H,28,29)/t19-,20-/m0/s1"  
YIC  InChIKey          InChI                 1.03   PJAVAHBDHYDQSB-PMACEKPBSA-N  
YIC  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H]2CCCCN2C(=O)CCC3CCCC3"  
YIC  SMILES            CACTVS                3.385  "OC(=O)[CH](Cc1ccccc1)NC(=O)[CH]2CCCCN2C(=O)CCC3CCCC3"  
YIC  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)C[C@@H](C(=O)O)NC(=O)[C@@H]2CCCCN2C(=O)CCC3CCCC3"  
YIC  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(cc1)CC(C(=O)O)NC(=O)C2CCCCN2C(=O)CCC3CCCC3"  
#
_pdbx_chem_comp_identifier.comp_id          YIC
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{S})-2-[[(2~{S})-1-(3-cyclopentylpropanoyl)piperidin-2-yl]carbonylamino]-3-phenyl-propanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YIC  "Create component"  2019-10-08  PDBJ  
YIC  "Initial release"   2020-09-30  RCSB  
##
