data_8MD
# 
_chem_comp.id                                    8MD 
_chem_comp.name                                  "(1S,2S,4S)-4-ethenylcyclohexane-1,2-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H14 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-17 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        142.196 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8MD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5TNJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8MD C1  C1  C 0 1 N N S N N N 61.053 61.621 26.535 1.542  -0.490 -0.261 C1  8MD 1  
8MD C2  C2  C 0 1 N N N N N N 60.540 62.332 27.754 0.627  -1.639 0.167  C2  8MD 2  
8MD C3  C3  C 0 1 N N N N N N 61.029 63.738 27.891 -0.782 -1.401 -0.380 C3  8MD 3  
8MD C4  C4  C 0 1 N N S N N N 62.445 63.835 27.440 -1.327 -0.082 0.172  C4  8MD 4  
8MD C5  C5  C 0 1 N N N N N N 62.609 63.511 25.982 -0.412 1.067  -0.256 C5  8MD 5  
8MD C6  C6  C 0 1 N N S N N N 61.433 62.527 25.410 0.997  0.828  0.291  C6  8MD 6  
8MD C7  C7  C 0 1 N N N N N N 62.894 65.238 27.677 -2.714 0.153  -0.367 C7  8MD 7  
8MD C8  C8  C 0 1 N N N N N N 62.827 65.756 28.937 -3.727 0.264  0.457  C8  8MD 8  
8MD O2  O1  O 0 1 N N N N N N 60.309 63.210 24.956 1.852  1.902  -0.109 O2  8MD 9  
8MD H1  H1  H 0 1 N N N N N N 60.226 60.996 26.168 1.578  -0.441 -1.349 H1  8MD 10 
8MD H3  H3  H 0 1 N N N N N N 59.441 62.351 27.706 1.015  -2.579 -0.226 H3  8MD 11 
8MD H4  H4  H 0 1 N N N N N N 60.858 61.767 28.643 0.591  -1.688 1.256  H4  8MD 12 
8MD H5  H5  H 0 1 N N N N N N 60.961 64.045 28.945 -0.745 -1.352 -1.468 H5  8MD 13 
8MD H6  H6  H 0 1 N N N N N N 60.405 64.402 27.275 -1.434 -2.219 -0.075 H6  8MD 14 
8MD H7  H7  H 0 1 N N N N N N 63.065 63.149 28.035 -1.363 -0.131 1.260  H7  8MD 15 
8MD H8  H8  H 0 1 N N N N N N 63.581 63.015 25.840 -0.375 1.116  -1.345 H8  8MD 16 
8MD H9  H9  H 0 1 N N N N N N 62.589 64.450 25.410 -0.800 2.007  0.137  H9  8MD 17 
8MD H10 H10 H 0 1 N N N N N N 61.873 61.928 24.599 0.961  0.780  1.379  H10 8MD 18 
8MD H11 H11 H 0 1 N N N N N N 63.268 65.837 26.860 -2.874 0.230  -1.432 H11 8MD 19 
8MD H12 H12 H 0 1 N N N N N N 63.149 66.770 29.122 -3.567 0.186  1.522  H12 8MD 20 
8MD H13 H13 H 0 1 N N N N N N 62.452 65.152 29.750 -4.721 0.432  0.071  H13 8MD 21 
8MD H14 H14 H 0 1 N N N N N N 59.666 62.587 24.638 2.763  1.816  0.203  H14 8MD 22 
8MD O1  O2  O 0 1 N N N N N N 62.166 60.756 26.773 2.858  -0.713 0.250  O1  8MD 23 
8MD H2  H2  H 0 1 N N N N N N 61.960 60.163 27.486 3.266  -1.533 -0.059 H2  8MD 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8MD O2 C6  SING N N 1  
8MD C6 C5  SING N N 2  
8MD C6 C1  SING N N 3  
8MD C5 C4  SING N N 4  
8MD C1 C2  SING N N 5  
8MD C4 C7  SING N N 6  
8MD C4 C3  SING N N 7  
8MD C7 C8  DOUB N N 8  
8MD C2 C3  SING N N 9  
8MD C1 H1  SING N N 10 
8MD C2 H3  SING N N 11 
8MD C2 H4  SING N N 12 
8MD C3 H5  SING N N 13 
8MD C3 H6  SING N N 14 
8MD C4 H7  SING N N 15 
8MD C5 H8  SING N N 16 
8MD C5 H9  SING N N 17 
8MD C6 H10 SING N N 18 
8MD C7 H11 SING N N 19 
8MD C8 H12 SING N N 20 
8MD C8 H13 SING N N 21 
8MD O2 H14 SING N N 22 
8MD C1 O1  SING N N 23 
8MD O1 H2  SING N N 24 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8MD SMILES           ACDLabs              12.01 "C1(CCC(\C=C)CC1O)O"                                                        
8MD InChI            InChI                1.03  "InChI=1S/C8H14O2/c1-2-6-3-4-7(9)8(10)5-6/h2,6-10H,1,3-5H2/t6-,7+,8-/m0/s1" 
8MD InChIKey         InChI                1.03  BSJHRRSHDADBTA-RNJXMRFFSA-N                                                 
8MD SMILES_CANONICAL CACTVS               3.385 "O[C@H]1CC[C@@H](C[C@@H]1O)C=C"                                             
8MD SMILES           CACTVS               3.385 "O[CH]1CC[CH](C[CH]1O)C=C"                                                  
8MD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C=C[C@H]1CCC([C@H](C1)O)O"                                                 
8MD SMILES           "OpenEye OEToolkits" 2.0.6 "C=CC1CCC(C(C1)O)O"                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8MD "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,2S,4S)-4-ethenylcyclohexane-1,2-diol"    
8MD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},4~{S})-4-ethenylcyclohexane-1,2-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8MD "Modify formula"  2017-02-17 RCSB 
8MD "Initial release" 2017-10-11 RCSB 
8MD "Modify PCM"      2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            8MD 
_pdbx_chem_comp_pcm.modified_residue_id                ASP 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OD1 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
