data_JSD
# 
_chem_comp.id                                    JSD 
_chem_comp.name                                  "[(1,2,3,4,5-eta)-1-(4-{[(4-carboxy-5,5-dimethyl-1,3-thiazolidin-2-yl)methyl]amino}-4-oxobutanoyl)cyclopentadienyl][(1,2,3,4,5-eta)-cyclopentadienyl]ruthenium" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H17 N2 O4 Ru S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-02-18 
_chem_comp.pdbx_modified_date                    2015-03-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        494.506 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JSD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4XXR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JSD RU  RU1 RU 0 0 N N N 12.579 5.091  -10.700 12.579 5.091  -10.700 RU  JSD 1  
JSD C11 C1  C  0 1 N N N 14.339 4.441  -11.864 14.339 4.441  -11.864 C11 JSD 2  
JSD C12 C2  C  0 1 N N N 14.735 4.739  -10.569 14.735 4.739  -10.569 C12 JSD 3  
JSD C13 C3  C  0 1 N N N 14.094 3.859  -9.716  14.094 3.859  -9.716  C13 JSD 4  
JSD C14 C4  C  0 1 N N N 13.276 3.040  -10.474 13.276 3.040  -10.474 C14 JSD 5  
JSD C15 C5  C  0 1 N N N 13.442 3.389  -11.792 13.442 3.389  -11.792 C15 JSD 6  
JSD C16 C6  C  0 1 N N N 11.768 7.016  -11.387 11.768 7.016  -11.387 C16 JSD 7  
JSD C17 C7  C  0 1 N N N 10.867 6.011  -11.682 10.867 6.011  -11.682 C17 JSD 8  
JSD C18 C8  C  0 1 N N N 10.449 5.409  -10.495 10.449 5.409  -10.495 C18 JSD 9  
JSD C19 C9  C  0 1 N N N 11.088 6.081  -9.447  11.088 6.081  -9.447  C19 JSD 10 
JSD C20 C10 C  0 1 N N N 11.905 7.058  -10.006 11.905 7.058  -10.006 C20 JSD 11 
JSD C24 C11 C  0 1 N N N 9.597  4.197  -10.390 9.597  4.197  -10.390 C24 JSD 12 
JSD C25 C12 C  0 1 N N N 9.230  3.480  -11.681 9.230  3.480  -11.681 C25 JSD 13 
JSD C26 C13 C  0 1 N N N 7.893  2.765  -11.594 7.893  2.765  -11.594 C26 JSD 14 
JSD C27 C14 C  0 1 N N N 7.583  2.000  -12.871 7.583  2.000  -12.871 C27 JSD 15 
JSD O28 O1  O  0 1 N N N 9.089  3.917  -9.321  9.089  3.917  -9.321  O28 JSD 16 
JSD O29 O2  O  0 1 N N N 8.377  2.019  -13.808 8.377  2.019  -13.808 O29 JSD 17 
JSD N30 N1  N  0 1 N N N 6.486  1.248  -12.899 6.486  1.248  -12.899 N30 JSD 18 
JSD C31 C15 C  0 1 N N N 6.139  0.484  -14.096 6.139  0.484  -14.096 C31 JSD 19 
JSD N33 N2  N  0 1 N N N 3.696  0.525  -13.590 3.696  0.525  -13.590 N33 JSD 20 
JSD C34 C16 C  0 1 N N R 4.823  -0.329 -13.926 4.823  -0.329 -13.926 C34 JSD 21 
JSD S49 S1  S  0 1 N N N 5.037  -1.506 -12.597 5.037  -1.506 -12.597 S49 JSD 22 
JSD C50 C17 C  0 1 N N N 3.355  -1.279 -12.049 3.355  -1.279 -12.049 C50 JSD 23 
JSD C51 C18 C  0 1 N N S 3.097  0.225  -12.314 3.097  0.225  -12.314 C51 JSD 24 
JSD C52 C19 C  0 1 N N N 2.387  -2.197 -12.825 2.387  -2.197 -12.825 C52 JSD 25 
JSD C53 C20 C  0 1 N N N 3.257  -1.521 -10.535 3.257  -1.521 -10.535 C53 JSD 26 
JSD C63 C21 C  0 1 N N N 1.655  0.543  -12.337 1.655  0.543  -12.337 C63 JSD 27 
JSD O64 O3  O  0 1 N N N 0.993  0.526  -13.355 0.993  0.526  -13.355 O64 JSD 28 
JSD O65 O4  O  0 1 N N N 1.142  0.924  -11.205 1.142  0.924  -11.205 O65 JSD 29 
JSD H10 H10 H  0 1 N N N 9.181  4.220  -12.493 9.181  4.220  -12.493 H10 JSD 30 
JSD H11 H11 H  0 1 N N N 10.011 2.739  -11.907 10.011 2.739  -11.907 H11 JSD 31 
JSD H12 H12 H  0 1 N N N 7.921  2.058  -10.752 7.921  2.058  -10.752 H12 JSD 32 
JSD H13 H13 H  0 1 N N N 7.101  3.509  -11.422 7.101  3.509  -11.422 H13 JSD 33 
JSD H14 H14 H  0 1 N N N 5.894  1.205  -12.094 5.894  1.205  -12.094 H14 JSD 34 
JSD H15 H15 H  0 1 N N N 6.015  1.183  -14.936 6.015  1.183  -14.936 H15 JSD 35 
JSD H16 H16 H  0 1 N N N 6.959  -0.215 -14.318 6.959  -0.215 -14.318 H16 JSD 36 
JSD H17 H17 H  0 1 N N N 4.013  1.473  -13.574 4.013  1.473  -13.574 H17 JSD 37 
JSD H19 H19 H  0 1 N N N 4.624  -0.907 -14.840 4.624  -0.907 -14.840 H19 JSD 38 
JSD H20 H20 H  0 1 N N N 3.588  0.809  -11.522 3.589  0.809  -11.522 H20 JSD 39 
JSD H21 H21 H  0 1 N N N 1.360  -2.035 -12.466 1.360  -2.035 -12.466 H21 JSD 40 
JSD H22 H22 H  0 1 N N N 2.441  -1.963 -13.898 2.441  -1.963 -13.899 H22 JSD 41 
JSD H23 H23 H  0 1 N N N 2.670  -3.248 -12.664 2.670  -3.248 -12.664 H23 JSD 42 
JSD H24 H24 H  0 1 N N N 2.217  -1.379 -10.207 2.217  -1.379 -10.207 H24 JSD 43 
JSD H25 H25 H  0 1 N N N 3.576  -2.549 -10.307 3.576  -2.549 -10.307 H25 JSD 44 
JSD H26 H26 H  0 1 N N N 3.908  -0.809 -10.007 3.908  -0.809 -10.007 H26 JSD 45 
JSD H27 H27 H  0 1 N N N 0.231  1.162  -11.334 0.231  1.162  -11.334 H27 JSD 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JSD RU  C11 SING N N 1  
JSD RU  C12 SING N N 2  
JSD RU  C13 SING N N 3  
JSD RU  C14 SING N N 4  
JSD RU  C15 SING N N 5  
JSD RU  C16 SING N N 6  
JSD RU  C17 SING N N 7  
JSD RU  C18 SING N N 8  
JSD RU  C19 SING N N 9  
JSD RU  C20 SING N N 10 
JSD C11 C12 SING N N 11 
JSD C11 C15 SING N N 12 
JSD C12 C13 SING N N 13 
JSD C13 C14 SING N N 14 
JSD C14 C15 SING N N 15 
JSD C16 C17 SING N N 16 
JSD C16 C20 SING N N 17 
JSD C17 C18 SING N N 18 
JSD C18 C19 SING N N 19 
JSD C18 C24 SING N N 20 
JSD C19 C20 SING N N 21 
JSD C24 C25 SING N N 22 
JSD C24 O28 DOUB N N 23 
JSD C25 C26 SING N N 24 
JSD C26 C27 SING N N 25 
JSD C27 O29 DOUB N N 26 
JSD C27 N30 SING N N 27 
JSD N30 C31 SING N N 28 
JSD C31 C34 SING N N 29 
JSD N33 C34 SING N N 30 
JSD N33 C51 SING N N 31 
JSD C34 S49 SING N N 32 
JSD S49 C50 SING N N 33 
JSD C50 C51 SING N N 34 
JSD C50 C52 SING N N 35 
JSD C50 C53 SING N N 36 
JSD C51 C63 SING N N 37 
JSD C63 O64 DOUB N N 38 
JSD C63 O65 SING N N 39 
JSD C25 H10 SING N N 40 
JSD C25 H11 SING N N 41 
JSD C26 H12 SING N N 42 
JSD C26 H13 SING N N 43 
JSD N30 H14 SING N N 44 
JSD C31 H15 SING N N 45 
JSD C31 H16 SING N N 46 
JSD N33 H17 SING N N 47 
JSD C34 H19 SING N N 48 
JSD C51 H20 SING N N 49 
JSD C52 H21 SING N N 50 
JSD C52 H22 SING N N 51 
JSD C52 H23 SING N N 52 
JSD C53 H24 SING N N 53 
JSD C53 H25 SING N N 54 
JSD C53 H26 SING N N 55 
JSD O65 H27 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JSD SMILES           ACDLabs              12.01 "O=C(NCC1SC(C(N1)C(=O)O)(C)C)CCC(=O)C2%11C8C9C%10C2[Ru]865489%10%11C3C7C6C5C34"                                                                                                       
JSD InChI            InChI                1.03  "InChI=1S/C16H21N2O4S.C5H5.Ru/c1-16(2)14(15(21)22)18-13(23-16)9-17-12(20)8-7-11(19)10-5-3-4-6-10;1-2-4-5-3-1;/h3-6,13-14,18H,7-9H2,1-2H3,(H,17,20)(H,21,22);1-5H;/t13-,14+;;/m1../s1" 
JSD InChIKey         InChI                1.03  JRWKHIBMJXULTB-BQFBZIMZSA-N                                                                                                                                                           
JSD SMILES_CANONICAL CACTVS               3.385 "CC1(C)S[C@H](CNC(=O)CCC(=O)C23[Ru]|4|5|6|7|8|9|%10(|C%11C|4C|5C|6C|7%11)|C(C|8C2|9)C3|%10)N[C@H]1C(O)=O"                                                                             
JSD SMILES           CACTVS               3.385 "CC1(C)S[CH](CNC(=O)CCC(=O)C23[Ru]|4|5|6|7|8|9|%10(|C%11C|4C|5C|6C|7%11)|C(C|8C2|9)C3|%10)N[CH]1C(O)=O"                                                                               
JSD SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1([C@@H](N[C@H](S1)CNC(=O)CCC(=O)C23[C]4[Ru]2567891([C]4[C]5[C]63)[C]2[C]7[C]8[C]9[C]12)C(=O)O)C"                                                                                  
JSD SMILES           "OpenEye OEToolkits" 1.7.6 "CC1(C(NC(S1)CNC(=O)CCC(=O)C23[C]4[Ru]2567891([C]4[C]5[C]63)[C]2[C]7[C]8[C]9[C]12)C(=O)O)C"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JSD "SYSTEMATIC NAME" ACDLabs 12.01 "[(1,2,3,4,5-eta)-1-(4-{[(4-carboxy-5,5-dimethyl-1,3-thiazolidin-2-yl)methyl]amino}-4-oxobutanoyl)cyclopentadienyl][(1,2,3,4,5-eta)-cyclopentadienyl]ruthenium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JSD "Create component" 2015-02-18 RCSB 
JSD "Initial release"  2015-03-18 RCSB 
# 
