data_XVD
#

_chem_comp.id                                   XVD
_chem_comp.name                                 "6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C14 H8 Cl F3 N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-01-15
_chem_comp.pdbx_modified_date                   2021-05-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       328.674
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XVD
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LEP
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XVD  N1   N1   N   0  1  Y  N  N  245.797  239.183  142.581   4.246   1.297  -0.709  N1   XVD   1  
XVD  C4   C1   C   0  1  Y  N  N  239.310  241.191  146.416  -3.200  -0.763   0.266  C4   XVD   2  
XVD  C5   C2   C   0  1  Y  N  N  240.435  240.633  145.845  -1.967  -0.169   0.054  C5   XVD   3  
XVD  C6   C3   C   0  1  Y  N  N  241.036  241.249  144.771  -0.827  -0.967  -0.093  C6   XVD   4  
XVD  C7   C4   C   0  1  Y  N  N  242.274  240.630  144.146   0.497  -0.340  -0.321  C7   XVD   5  
XVD  C8   C5   C   0  1  Y  N  N  243.520  241.188  144.371   1.499  -0.469   0.636  C8   XVD   6  
XVD  C10  C6   C   0  1  Y  N  N  244.547  239.495  142.997   2.968   0.840  -0.767  C10  XVD   7  
XVD  C13  C7   C   0  1  Y  N  N  246.643  240.055  143.092   4.801   0.910   0.411  C13  XVD   8  
XVD  C1   C8   C   0  1  Y  N  N  240.510  242.415  144.253  -0.943  -2.355  -0.025  C1   XVD   9  
XVD  C11  C9   C   0  1  Y  N  N  243.276  238.920  142.766   1.950   0.960  -1.718  C11  XVD  10  
XVD  C12  C10  C   0  1  Y  N  N  242.152  239.495  143.344   0.735   0.379  -1.496  C12  XVD  11  
XVD  C14  C11  C   0  1  N  N  N  240.152  238.347  146.308  -3.070   1.934   0.146  C14  XVD  12  
XVD  C2   C12  C   0  1  Y  N  N  239.385  242.973  144.818  -2.179  -2.933   0.188  C2   XVD  13  
XVD  C3   C13  C   0  1  Y  N  N  238.787  242.359  145.899  -3.303  -2.140   0.338  C3   XVD  14  
XVD  C9   C14  C   0  1  Y  N  N  244.666  240.601  143.788   2.734   0.119   0.417  C9   XVD  15  
XVD  F1   F1   F   0  1  N  N  N  239.312  238.358  147.380  -2.785   3.301   0.052  F1   XVD  16  
XVD  F2   F2   F   0  1  N  N  N  240.904  237.211  146.325  -3.628   1.660   1.400  F2   XVD  17  
XVD  F3   F3   F   0  1  N  N  N  239.435  238.396  145.157  -3.977   1.577  -0.857  F3   XVD  18  
XVD  N2   N2   N   0  1  Y  N  N  245.981  240.921  143.826   3.911   0.180   1.143  N2   XVD  19  
XVD  O1   O1   O   0  1  N  N  N  248.024  240.053  142.900   6.069   1.192   0.787  O1   XVD  20  
XVD  O2   O2   O   0  1  N  N  N  240.987  239.458  146.358  -1.864   1.184  -0.012  O2   XVD  21  
XVD  CL1  CL1  CL  0  0  N  N  N  241.277  243.215  142.858   0.465  -3.354  -0.206  CL1  XVD  22  
XVD  H2   H2   H   0  1  N  N  N  238.840  240.716  147.264  -4.081  -0.150   0.381  H2   XVD  23  
XVD  H3   H3   H   0  1  N  N  N  243.616  242.068  144.989   1.316  -1.024   1.544  H3   XVD  24  
XVD  H4   H4   H   0  1  N  N  N  243.180  238.041  142.145   2.124   1.514  -2.628  H4   XVD  25  
XVD  H5   H5   H   0  1  N  N  N  241.178  239.061  143.172  -0.047   0.474  -2.234  H5   XVD  26  
XVD  H6   H6   H   0  1  N  N  N  238.973  243.887  144.417  -2.269  -4.008   0.241  H6   XVD  27  
XVD  H7   H7   H   0  1  N  N  N  237.904  242.795  146.343  -4.266  -2.599   0.504  H7   XVD  28  
XVD  H8   H8   H   0  1  N  N  N  246.381  241.688  144.328   4.073  -0.222   2.011  H8   XVD  29  
XVD  H1   H1   H   0  1  N  N  N  248.265  239.323  142.341   6.156   2.013   1.292  H1   XVD  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XVD  N1   C10  SING  Y  N   1  
XVD  N1   C13  DOUB  Y  N   2  
XVD  C11  C10  DOUB  Y  N   3  
XVD  C11  C12  SING  Y  N   4  
XVD  CL1  C1   SING  N  N   5  
XVD  O1   C13  SING  N  N   6  
XVD  C10  C9   SING  Y  N   7  
XVD  C13  N2   SING  Y  N   8  
XVD  C12  C7   DOUB  Y  N   9  
XVD  C9   N2   SING  Y  N  10  
XVD  C9   C8   DOUB  Y  N  11  
XVD  C7   C8   SING  Y  N  12  
XVD  C7   C6   SING  N  N  13  
XVD  C1   C6   DOUB  Y  N  14  
XVD  C1   C2   SING  Y  N  15  
XVD  C6   C5   SING  Y  N  16  
XVD  C2   C3   DOUB  Y  N  17  
XVD  F3   C14  SING  N  N  18  
XVD  C5   O2   SING  N  N  19  
XVD  C5   C4   DOUB  Y  N  20  
XVD  C3   C4   SING  Y  N  21  
XVD  C14  F2   SING  N  N  22  
XVD  C14  O2   SING  N  N  23  
XVD  C14  F1   SING  N  N  24  
XVD  C4   H2   SING  N  N  25  
XVD  C8   H3   SING  N  N  26  
XVD  C11  H4   SING  N  N  27  
XVD  C12  H5   SING  N  N  28  
XVD  C2   H6   SING  N  N  29  
XVD  C3   H7   SING  N  N  30  
XVD  N2   H8   SING  N  N  31  
XVD  O1   H1   SING  N  N  32  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XVD  SMILES            ACDLabs               12.01  "n3c2c(cc(c1c(cccc1Cl)OC(F)(F)F)cc2)nc3O"  
XVD  InChI             InChI                 1.03   "InChI=1S/C14H8ClF3N2O2/c15-8-2-1-3-11(22-14(16,17)18)12(8)7-4-5-9-10(6-7)20-13(21)19-9/h1-6H,(H2,19,20,21)"  
XVD  InChIKey          InChI                 1.03   COBXSLRIXGQVGS-UHFFFAOYSA-N  
XVD  SMILES_CANONICAL  CACTVS                3.385  "Oc1[nH]c2cc(ccc2n1)c3c(Cl)cccc3OC(F)(F)F"  
XVD  SMILES            CACTVS                3.385  "Oc1[nH]c2cc(ccc2n1)c3c(Cl)cccc3OC(F)(F)F"  
XVD  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(c(c1)Cl)c2ccc3c(c2)[nH]c(n3)O)OC(F)(F)F"  
XVD  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(c(c1)Cl)c2ccc3c(c2)[nH]c(n3)O)OC(F)(F)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XVD  "SYSTEMATIC NAME"  ACDLabs               12.01  "6-[2-chloro-6-(trifluoromethoxy)phenyl]-1H-benzimidazol-2-ol"  
XVD  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "6-[2-chloranyl-6-(trifluoromethyloxy)phenyl]-1~{H}-benzimidazol-2-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XVD  "Create component"  2021-01-15  RCSB  
XVD  "Initial release"   2021-05-12  RCSB  
##
