data_8TF
# 
_chem_comp.id                                    8TF 
_chem_comp.name                                  "2,4-bis[(E)-(1-ethyl-3,3-dimethyl-indol-2-ylidene)methyl]cyclobutane-1,3-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H34 N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Dye with squaraine-scaffold" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-29 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        454.603 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8TF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q34 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8TF CAC C1  C 0 1 N N N 16.743 -4.474 29.089 3.083  3.323  -0.393 CAC 8TF 1  
8TF CAD C2  C 0 1 N N N 15.605 -3.432 29.143 3.463  2.517  0.851  CAD 8TF 2  
8TF NAA N1  N 0 1 N N N 15.942 -1.896 28.722 3.961  1.200  0.446  NAA 8TF 3  
8TF CAE C3  C 0 1 Y N N 14.881 -1.001 28.681 5.299  0.916  0.176  CAE 8TF 4  
8TF CAJ C4  C 0 1 Y N N 13.545 -1.169 28.876 6.424  1.740  0.216  CAJ 8TF 5  
8TF CAI C5  C 0 1 Y N N 12.621 -0.116 28.724 7.667  1.230  -0.097 CAI 8TF 6  
8TF CAH C6  C 0 1 Y N N 13.065 1.143  28.331 7.808  -0.099 -0.452 CAH 8TF 7  
8TF CAG C7  C 0 1 Y N N 14.430 1.291  28.111 6.696  -0.922 -0.493 CAG 8TF 8  
8TF CAF C8  C 0 1 Y N N 15.285 0.235  28.251 5.453  -0.417 -0.182 CAF 8TF 9  
8TF CAK C9  C 0 1 N N N 16.683 0.177  28.101 4.081  -1.049 -0.136 CAK 8TF 10 
8TF CAL C10 C 0 1 N N N 17.247 1.012  26.947 3.688  -1.573 -1.519 CAL 8TF 11 
8TF CAM C11 C 0 1 N N N 17.197 0.939  29.267 4.048  -2.181 0.893  CAM 8TF 12 
8TF CAN C12 C 0 1 N N N 17.052 -1.236 28.235 3.163  0.077  0.289  CAN 8TF 13 
8TF CAO C13 C 0 1 N N N 18.261 -1.888 28.163 1.858  0.005  0.473  CAO 8TF 14 
8TF CAP C14 C 0 1 N N N 19.538 -1.466 27.716 1.118  -1.264 0.134  CAP 8TF 15 
8TF CBF C15 C 0 1 N N N 20.668 -2.278 27.627 0.079  -1.088 -0.954 CBF 8TF 16 
8TF OBH O1  O 0 1 N N N 20.843 -3.467 27.886 0.048  -1.178 -2.158 OBH 8TF 17 
8TF CAQ C16 C 0 1 N N N 20.335 -0.373 27.257 -0.029 -1.567 1.074  CAQ 8TF 18 
8TF OBG O2  O 0 1 N N N 20.208 0.845  27.008 -0.179 -2.183 2.102  OBG 8TF 19 
8TF CAR C17 C 0 1 N N N 21.451 -1.221 27.156 -0.904 -0.750 0.147  CAR 8TF 20 
8TF CAS C18 C 0 1 N N N 22.756 -0.952 26.723 -2.275 -1.339 -0.065 CAS 8TF 21 
8TF CAT C19 C 0 1 N N N 23.799 -1.813 26.685 -3.336 -0.554 -0.082 CAT 8TF 22 
8TF CBC C20 C 0 1 N N N 23.852 -3.179 27.016 -3.360 0.940  0.156  CBC 8TF 23 
8TF CBD C21 C 0 1 N N N 23.592 -3.393 28.512 -2.850 1.267  1.561  CBD 8TF 24 
8TF CBE C22 C 0 1 N N N 22.926 -4.042 26.134 -2.518 1.663  -0.898 CBE 8TF 25 
8TF CAX C23 C 0 1 Y N N 25.158 -3.545 26.779 -4.817 1.318  0.021  CAX 8TF 26 
8TF CAY C24 C 0 1 Y N N 25.746 -4.736 26.941 -5.476 2.524  0.127  CAY 8TF 27 
8TF CAZ C25 C 0 1 Y N N 27.102 -4.893 26.640 -6.847 2.580  -0.048 CAZ 8TF 28 
8TF CBA C26 C 0 1 Y N N 27.829 -3.795 26.178 -7.553 1.425  -0.329 CBA 8TF 29 
8TF CBB C27 C 0 1 Y N N 27.163 -2.581 26.035 -6.898 0.216  -0.435 CBB 8TF 30 
8TF CAW C28 C 0 1 Y N N 25.849 -2.475 26.338 -5.516 0.151  -0.260 CAW 8TF 31 
8TF NAB N2  N 0 1 N N N 25.026 -1.418 26.280 -4.647 -0.937 -0.325 NAB 8TF 32 
8TF CAU C29 C 0 1 N N N 25.551 -0.027 25.876 -5.066 -2.312 -0.610 CAU 8TF 33 
8TF CAV C30 C 0 1 N N N 26.184 -0.010 24.469 -5.406 -3.023 0.701  CAV 8TF 34 
8TF H1  H1  H 0 1 N N N 16.357 -5.456 29.401 2.306  2.794  -0.945 H1  8TF 35 
8TF H2  H2  H 0 1 N N N 17.130 -4.541 28.061 2.712  4.302  -0.092 H2  8TF 36 
8TF H3  H3  H 0 1 N N N 17.553 -4.167 29.766 3.960  3.446  -1.028 H3  8TF 37 
8TF H4  H4  H 0 1 N N N 14.808 -3.786 28.472 4.240  3.046  1.403  H4  8TF 38 
8TF H5  H5  H 0 1 N N N 15.232 -3.411 30.177 2.586  2.394  1.486  H5  8TF 39 
8TF H6  H6  H 0 1 N N N 13.179 -2.145 29.158 6.322  2.779  0.492  H6  8TF 40 
8TF H7  H7  H 0 1 N N N 11.571 -0.286 28.912 8.535  1.872  -0.064 H7  8TF 41 
8TF H8  H8  H 0 1 N N N 12.380 1.968  28.203 8.783  -0.493 -0.697 H8  8TF 42 
8TF H9  H9  H 0 1 N N N 14.820 2.256  27.825 6.804  -1.960 -0.771 H9  8TF 43 
8TF H10 H10 H 0 1 N N N 18.341 0.901  26.914 4.397  -2.339 -1.833 H10 8TF 44 
8TF H11 H11 H 0 1 N N N 16.814 0.665  25.997 2.686  -2.002 -1.474 H11 8TF 45 
8TF H12 H12 H 0 1 N N N 16.991 2.071  27.101 3.699  -0.752 -2.236 H12 8TF 46 
8TF H13 H13 H 0 1 N N N 18.297 0.952  29.241 4.363  -1.799 1.863  H13 8TF 47 
8TF H14 H14 H 0 1 N N N 16.817 1.970  29.227 3.033  -2.573 0.968  H14 8TF 48 
8TF H15 H15 H 0 1 N N N 16.858 0.459  30.197 4.723  -2.977 0.579  H15 8TF 49 
8TF H16 H16 H 0 1 N N N 18.232 -2.910 28.511 1.320  0.855  0.866  H16 8TF 50 
8TF H17 H17 H 0 1 N N N 19.267 -1.715 26.679 1.784  -2.111 -0.032 H17 8TF 51 
8TF H18 H18 H 0 1 N N N 21.739 -0.970 28.188 -0.933 0.311  0.396  H18 8TF 52 
8TF H19 H19 H 0 1 N N N 22.951 0.054  26.382 -2.389 -2.405 -0.204 H19 8TF 53 
8TF H20 H20 H 0 1 N N N 23.639 -4.467 28.743 -1.796 1.000  1.637  H20 8TF 54 
8TF H21 H21 H 0 1 N N N 24.355 -2.859 29.097 -2.970 2.333  1.752  H21 8TF 55 
8TF H22 H22 H 0 1 N N N 22.595 -3.006 28.770 -3.423 0.700  2.296  H22 8TF 56 
8TF H23 H23 H 0 1 N N N 23.008 -5.096 26.437 -2.920 1.455  -1.890 H23 8TF 57 
8TF H24 H24 H 0 1 N N N 21.886 -3.706 26.256 -2.546 2.736  -0.712 H24 8TF 58 
8TF H25 H25 H 0 1 N N N 23.223 -3.939 25.080 -1.487 1.311  -0.843 H25 8TF 59 
8TF H26 H26 H 0 1 N N N 25.173 -5.576 27.304 -4.921 3.424  0.346  H26 8TF 60 
8TF H27 H27 H 0 1 N N N 27.581 -5.853 26.764 -7.365 3.525  0.034  H27 8TF 61 
8TF H28 H28 H 0 1 N N N 28.878 -3.885 25.938 -8.624 1.470  -0.465 H28 8TF 62 
8TF H29 H29 H 0 1 N N N 27.701 -1.715 25.679 -7.456 -0.682 -0.654 H29 8TF 63 
8TF H30 H30 H 0 1 N N N 24.711 0.683  25.892 -5.945 -2.297 -1.254 H30 8TF 64 
8TF H31 H31 H 0 1 N N N 26.311 0.287  26.607 -4.256 -2.842 -1.112 H31 8TF 65 
8TF H32 H32 H 0 1 N N N 26.539 1.005  24.238 -5.717 -4.046 0.489  H32 8TF 66 
8TF H33 H33 H 0 1 N N N 27.032 -0.710 24.440 -4.526 -3.038 1.345  H33 8TF 67 
8TF H34 H34 H 0 1 N N N 25.433 -0.314 23.725 -6.215 -2.493 1.203  H34 8TF 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8TF CAC CAD SING N N 1  
8TF CAD NAA SING N N 2  
8TF NAA CAE SING N N 3  
8TF NAA CAN SING N N 4  
8TF CAE CAJ DOUB Y N 5  
8TF CAE CAF SING Y N 6  
8TF CAJ CAI SING Y N 7  
8TF CAI CAH DOUB Y N 8  
8TF CAH CAG SING Y N 9  
8TF CAG CAF DOUB Y N 10 
8TF CAF CAK SING N N 11 
8TF CAK CAL SING N N 12 
8TF CAK CAM SING N N 13 
8TF CAK CAN SING N N 14 
8TF CAN CAO DOUB N E 15 
8TF CAO CAP SING N N 16 
8TF CAP CBF SING N N 17 
8TF CAP CAQ SING N N 18 
8TF CBF OBH DOUB N N 19 
8TF CBF CAR SING N N 20 
8TF CAQ OBG DOUB N N 21 
8TF CAQ CAR SING N N 22 
8TF CAR CAS SING N N 23 
8TF CAS CAT DOUB N E 24 
8TF CAT CBC SING N N 25 
8TF CAT NAB SING N N 26 
8TF CBC CBD SING N N 27 
8TF CBC CBE SING N N 28 
8TF CBC CAX SING N N 29 
8TF CAX CAY DOUB Y N 30 
8TF CAX CAW SING Y N 31 
8TF CAY CAZ SING Y N 32 
8TF CAZ CBA DOUB Y N 33 
8TF CBA CBB SING Y N 34 
8TF CBB CAW DOUB Y N 35 
8TF CAW NAB SING N N 36 
8TF NAB CAU SING N N 37 
8TF CAU CAV SING N N 38 
8TF CAC H1  SING N N 39 
8TF CAC H2  SING N N 40 
8TF CAC H3  SING N N 41 
8TF CAD H4  SING N N 42 
8TF CAD H5  SING N N 43 
8TF CAJ H6  SING N N 44 
8TF CAI H7  SING N N 45 
8TF CAH H8  SING N N 46 
8TF CAG H9  SING N N 47 
8TF CAL H10 SING N N 48 
8TF CAL H11 SING N N 49 
8TF CAL H12 SING N N 50 
8TF CAM H13 SING N N 51 
8TF CAM H14 SING N N 52 
8TF CAM H15 SING N N 53 
8TF CAO H16 SING N N 54 
8TF CAP H17 SING N N 55 
8TF CAR H18 SING N N 56 
8TF CAS H19 SING N N 57 
8TF CBD H20 SING N N 58 
8TF CBD H21 SING N N 59 
8TF CBD H22 SING N N 60 
8TF CBE H23 SING N N 61 
8TF CBE H24 SING N N 62 
8TF CBE H25 SING N N 63 
8TF CAY H26 SING N N 64 
8TF CAZ H27 SING N N 65 
8TF CBA H28 SING N N 66 
8TF CBB H29 SING N N 67 
8TF CAU H30 SING N N 68 
8TF CAU H31 SING N N 69 
8TF CAV H32 SING N N 70 
8TF CAV H33 SING N N 71 
8TF CAV H34 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8TF InChI            InChI                1.06  "InChI=1S/C30H34N2O2/c1-7-31-23-15-11-9-13-21(23)29(3,4)25(31)17-19-27(33)20(28(19)34)18-26-30(5,6)22-14-10-12-16-24(22)32(26)8-2/h9-20H,7-8H2,1-6H3/b25-17+,26-18+/t19-,20-" 
8TF InChIKey         InChI                1.06  RFXRJJSGFNDERY-FAKNRSBRSA-N                                                                                                                                                   
8TF SMILES_CANONICAL CACTVS               3.385 "CCN\1c2ccccc2C(C)(C)C\1=C\[C@@H]3C(=O)[C@@H](\C=C/4N(CC)c5ccccc5C/4(C)C)C3=O"                                                                                                
8TF SMILES           CACTVS               3.385 "CCN1c2ccccc2C(C)(C)C1=C[CH]3C(=O)[CH](C=C4N(CC)c5ccccc5C4(C)C)C3=O"                                                                                                          
8TF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1/C(=C/C2C(=O)C(C2=O)/C=C\3/N(c4c(cccc4)C3(C)C)CC)/C(c5c1cccc5)(C)C"                                                                                                      
8TF SMILES           "OpenEye OEToolkits" 2.0.7 "CCN1c2ccccc2C(C1=CC3C(=O)C(C3=O)C=C4C(c5ccccc5N4CC)(C)C)(C)C"                                                                                                                
# 
_pdbx_chem_comp_identifier.comp_id           8TF 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2,4-bis[(~{E})-(1-ethyl-3,3-dimethyl-indol-2-ylidene)methyl]cyclobutane-1,3-dione" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      8TF 
_pdbx_chem_comp_synonyms.name         "Dye with squaraine-scaffold" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8TF "Create component"  2021-10-29 PDBE 
8TF "Initial release"   2022-06-01 RCSB 
8TF "Modify descriptor" 2022-08-22 RCSB 
# 
