data_A1AWF
# 
_chem_comp.id                                    A1AWF 
_chem_comp.name                                  "(2S,4R,5S,6S,8R,12R,13R)-5,13-dihydroxy-2,4,6,8,12-pentamethyl-3,9-dioxopentadecanal" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H36 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-07-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.497 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AWF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9CGN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AWF C1   C1  C 0 1 N N N N N N 47.429 36.797 102.599 6.949  1.002  -0.182 C1   A1AWF 1  
A1AWF C2   C2  C 0 1 N N S N N N 47.298 37.956 103.621 5.556  1.499  -0.472 C2   A1AWF 2  
A1AWF C3   C3  C 0 1 N N N N N N 46.745 37.401 104.973 4.556  0.664  0.286  C3   A1AWF 3  
A1AWF C4   C4  C 0 1 N N R N N N 45.911 38.244 105.983 3.173  0.452  -0.273 C4   A1AWF 4  
A1AWF C5   C5  C 0 1 N N S N N N 44.498 37.623 106.120 2.591  -0.848 0.285  C5   A1AWF 5  
A1AWF C6   C6  C 0 1 N N S N N N 43.782 37.665 104.760 1.240  -1.127 -0.377 C6   A1AWF 6  
A1AWF C7   C7  C 0 1 N N N N N N 43.663 39.158 104.357 0.657  -2.427 0.181  C7   A1AWF 7  
A1AWF C8   C8  C 0 1 N N R N N N 42.974 39.371 102.985 -0.756 -2.630 -0.368 C8   A1AWF 8  
A1AWF C9   C9  C 0 1 N N N N N N 43.866 38.952 101.809 -1.661 -1.547 0.160  C9   A1AWF 9  
A1AWF C10  C10 C 0 1 N N N N N N 45.079 39.817 101.384 -2.897 -1.156 -0.608 C10  A1AWF 10 
A1AWF C11  C11 C 0 1 N N N N N N 45.658 39.262 100.323 -3.632 -0.043 0.140  C11  A1AWF 11 
A1AWF C12  C12 C 0 1 N N R N N N 46.881 39.868 99.587  -4.887 0.354  -0.639 C12  A1AWF 12 
A1AWF C13  C13 C 0 1 N N R N N N 47.767 38.611 99.244  -5.555 1.550  0.042  C13  A1AWF 13 
A1AWF C14  C14 C 0 1 N N N N N N 47.903 38.313 97.726  -6.810 1.946  -0.738 C14  A1AWF 14 
A1AWF C15  C15 C 0 1 N N N N N N 47.846 36.803 97.447  -7.408 3.217  -0.130 C15  A1AWF 15 
A1AWF C2C  C16 C 0 1 N N N N N N 48.650 38.715 103.787 5.434  2.961  -0.037 C2C  A1AWF 16 
A1AWF C4C  C17 C 0 1 N N N N N N 46.573 38.280 107.378 2.276  1.626  0.127  C4C  A1AWF 17 
A1AWF C6C  C18 C 0 1 N N N N N N 42.431 36.926 104.865 1.430  -1.261 -1.889 C6C  A1AWF 18 
A1AWF C8C  C19 C 0 1 N N N N N N 42.623 40.841 102.674 -1.284 -3.996 0.075  C8C  A1AWF 19 
A1AWF O1C  O1  O 0 1 N N N N N N 46.610 36.627 101.737 7.649  0.607  -1.082 O1C  A1AWF 20 
A1AWF O3C  O2  O 0 1 N N N N N N 46.947 36.264 105.268 4.864  0.164  1.342  O3C  A1AWF 21 
A1AWF O5C  O3  O 0 1 N N N N N N 43.733 38.395 107.026 2.413  -0.723 1.697  O5C  A1AWF 22 
A1AWF O9C  O4  O 0 1 N N N N N N 43.587 37.963 101.192 -1.395 -0.991 1.199  O9C  A1AWF 23 
A1AWF C12C C20 C 0 0 N N N N N N 47.451 41.122 100.316 -5.862 -0.825 -0.669 C12C A1AWF 24 
A1AWF O13C O5  O 0 0 N N N N N N 49.057 38.606 99.839  -5.916 1.196  1.379  O13C A1AWF 25 
A1AWF H1   H1  H 0 1 N Y N N N N 48.275 36.128 102.664 7.322  1.005  0.832  H1   A1AWF 26 
A1AWF H2   H2  H 0 1 N N N N N N 46.560 38.670 103.227 5.358  1.421  -1.541 H2   A1AWF 27 
A1AWF H3   H3  H 0 1 N N N N N N 45.817 39.271 105.601 3.226  0.390  -1.360 H3   A1AWF 28 
A1AWF H4   H4  H 0 1 N N N N N N 44.588 36.580 106.458 3.274  -1.671 0.076  H4   A1AWF 29 
A1AWF H5   H5  H 0 1 N N N N N N 44.407 37.150 104.016 0.556  -0.304 -0.168 H5   A1AWF 30 
A1AWF H6   H6  H 0 1 N N N N N N 44.674 39.588 104.310 1.287  -3.265 -0.118 H6   A1AWF 31 
A1AWF H7   H7  H 0 1 N N N N N N 43.077 39.682 105.127 0.620  -2.371 1.269  H7   A1AWF 32 
A1AWF H8   H8  H 0 1 N N N N N N 42.050 38.775 102.960 -0.733 -2.585 -1.457 H8   A1AWF 33 
A1AWF H9   H9  H 0 1 N N N N N N 45.801 39.871 102.212 -2.613 -0.802 -1.599 H9   A1AWF 34 
A1AWF H10  H10 H 0 1 N N N N N N 44.737 40.831 101.129 -3.552 -2.022 -0.706 H10  A1AWF 35 
A1AWF H11  H11 H 0 1 N N N N N N 44.867 39.173 99.564  -3.917 -0.397 1.131  H11  A1AWF 36 
A1AWF H12  H12 H 0 1 N N N N N N 45.971 38.258 100.645 -2.977 0.823  0.238  H12  A1AWF 37 
A1AWF H13  H13 H 0 1 N N N N N N 46.500 40.232 98.622  -4.612 0.623  -1.659 H13  A1AWF 38 
A1AWF H14  H14 H 0 1 N N N N N N 47.221 37.752 99.661  -4.860 2.390  0.064  H14  A1AWF 39 
A1AWF H15  H15 H 0 1 N N N N N N 48.865 38.708 97.368  -6.548 2.130  -1.780 H15  A1AWF 40 
A1AWF H16  H16 H 0 1 N N N N N N 47.081 38.808 97.188  -7.541 1.139  -0.684 H16  A1AWF 41 
A1AWF H17  H17 H 0 1 N N N N N N 47.945 36.625 96.366  -8.302 3.499  -0.686 H17  A1AWF 42 
A1AWF H18  H18 H 0 1 N N N N N N 48.668 36.301 97.978  -7.670 3.033  0.911  H18  A1AWF 43 
A1AWF H19  H19 H 0 1 N N N N N N 46.884 36.401 97.798  -6.677 4.024  -0.184 H19  A1AWF 44 
A1AWF H20  H20 H 0 1 N N N N N N 48.527 39.529 104.516 6.157  3.565  -0.585 H20  A1AWF 45 
A1AWF H21  H21 H 0 1 N N N N N N 49.421 38.017 104.145 4.427  3.320  -0.247 H21  A1AWF 46 
A1AWF H22  H22 H 0 1 N N N N N N 48.956 39.134 102.817 5.632  3.039  1.032  H22  A1AWF 47 
A1AWF H23  H23 H 0 1 N N N N N N 45.957 38.883 108.061 2.691  2.552  -0.270 H23  A1AWF 48 
A1AWF H24  H24 H 0 1 N N N N N N 46.659 37.256 107.769 1.276  1.473  -0.277 H24  A1AWF 49 
A1AWF H25  H25 H 0 1 N N N N N N 47.575 38.727 107.297 2.223  1.688  1.214  H25  A1AWF 50 
A1AWF H26  H26 H 0 1 N N N N N N 42.607 35.879 105.154 1.762  -0.307 -2.299 H26  A1AWF 51 
A1AWF H27  H27 H 0 1 N N N N N N 41.804 37.415 105.624 2.179  -2.025 -2.094 H27  A1AWF 52 
A1AWF H28  H28 H 0 1 N N N N N N 41.920 36.957 103.892 0.484  -1.546 -2.350 H28  A1AWF 53 
A1AWF H29  H29 H 0 1 N N N N N N 41.977 41.240 103.469 -0.682 -4.783 -0.379 H29  A1AWF 54 
A1AWF H30  H30 H 0 1 N N N N N N 43.547 41.435 102.620 -1.225 -4.074 1.160  H30  A1AWF 55 
A1AWF H31  H31 H 0 1 N N N N N N 42.095 40.896 101.711 -2.322 -4.105 -0.242 H31  A1AWF 56 
A1AWF H32  H32 H 0 1 N N N N N N 44.151 38.389 107.879 1.815  -0.008 1.957  H32  A1AWF 57 
A1AWF H33  H33 H 0 1 N N N N N N 46.651 41.866 100.446 -6.757 -0.543 -1.225 H33  A1AWF 58 
A1AWF H34  H34 H 0 1 N N N N N N 47.841 40.827 101.301 -5.387 -1.678 -1.155 H34  A1AWF 59 
A1AWF H35  H35 H 0 1 N N N N N N 48.263 41.558 99.715  -6.138 -1.095 0.350  H35  A1AWF 60 
A1AWF H36  H36 H 0 1 N N N N N N 48.978 38.788 100.768 -6.534 0.454  1.436  H36  A1AWF 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AWF C15  C14  SING N N 1  
A1AWF C14  C13  SING N N 2  
A1AWF C13  C12  SING N N 3  
A1AWF C13  O13C SING N N 4  
A1AWF C12  C12C SING N N 5  
A1AWF C12  C11  SING N N 6  
A1AWF C11  C10  SING N N 7  
A1AWF O9C  C9   DOUB N N 8  
A1AWF C10  C9   SING N N 9  
A1AWF O1C  C1   DOUB N N 10 
A1AWF C9   C8   SING N N 11 
A1AWF C1   C2   SING N N 12 
A1AWF C8C  C8   SING N N 13 
A1AWF C8   C7   SING N N 14 
A1AWF C2   C2C  SING N N 15 
A1AWF C2   C3   SING N N 16 
A1AWF C7   C6   SING N N 17 
A1AWF C6   C6C  SING N N 18 
A1AWF C6   C5   SING N N 19 
A1AWF C3   O3C  DOUB N N 20 
A1AWF C3   C4   SING N N 21 
A1AWF C4   C5   SING N N 22 
A1AWF C4   C4C  SING N N 23 
A1AWF C5   O5C  SING N N 24 
A1AWF C1   H1   SING N N 25 
A1AWF C2   H2   SING N N 26 
A1AWF C4   H3   SING N N 27 
A1AWF C5   H4   SING N N 28 
A1AWF C6   H5   SING N N 29 
A1AWF C7   H6   SING N N 30 
A1AWF C7   H7   SING N N 31 
A1AWF C8   H8   SING N N 32 
A1AWF C10  H9   SING N N 33 
A1AWF C10  H10  SING N N 34 
A1AWF C11  H11  SING N N 35 
A1AWF C11  H12  SING N N 36 
A1AWF C12  H13  SING N N 37 
A1AWF C13  H14  SING N N 38 
A1AWF C14  H15  SING N N 39 
A1AWF C14  H16  SING N N 40 
A1AWF C15  H17  SING N N 41 
A1AWF C15  H18  SING N N 42 
A1AWF C15  H19  SING N N 43 
A1AWF C2C  H20  SING N N 44 
A1AWF C2C  H21  SING N N 45 
A1AWF C2C  H22  SING N N 46 
A1AWF C4C  H23  SING N N 47 
A1AWF C4C  H24  SING N N 48 
A1AWF C4C  H25  SING N N 49 
A1AWF C6C  H26  SING N N 50 
A1AWF C6C  H27  SING N N 51 
A1AWF C6C  H28  SING N N 52 
A1AWF C8C  H29  SING N N 53 
A1AWF C8C  H30  SING N N 54 
A1AWF C8C  H31  SING N N 55 
A1AWF O5C  H32  SING N N 56 
A1AWF C12C H33  SING N N 57 
A1AWF C12C H34  SING N N 58 
A1AWF C12C H35  SING N N 59 
A1AWF O13C H36  SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AWF SMILES           ACDLabs              12.01 "CC(CC(C)C(=O)CCC(C)C(O)CC)C(O)C(C)C(=O)C(C)C=O"                                                                                                        
A1AWF InChI            InChI                1.06  "InChI=1S/C20H36O5/c1-7-17(22)12(2)8-9-18(23)13(3)10-14(4)19(24)16(6)20(25)15(5)11-21/h11-17,19,22,24H,7-10H2,1-6H3/t12-,13-,14+,15+,16-,17-,19+/m1/s1" 
A1AWF InChIKey         InChI                1.06  LWRZYDNPGZEYIZ-AEUCKGDRSA-N                                                                                                                             
A1AWF SMILES_CANONICAL CACTVS               3.385 "CC[C@@H](O)[C@H](C)CCC(=O)[C@H](C)C[C@H](C)[C@H](O)[C@@H](C)C(=O)[C@@H](C)C=O"                                                                         
A1AWF SMILES           CACTVS               3.385 "CC[CH](O)[CH](C)CCC(=O)[CH](C)C[CH](C)[CH](O)[CH](C)C(=O)[CH](C)C=O"                                                                                   
A1AWF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H]([C@H](C)CCC(=O)[C@H](C)C[C@H](C)[C@@H]([C@@H](C)C(=O)[C@@H](C)C=O)O)O"                                                                         
A1AWF SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(C(C)CCC(=O)C(C)CC(C)C(C(C)C(=O)C(C)C=O)O)O"                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AWF "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,4R,5S,6S,8R,12R,13R)-5,13-dihydroxy-2,4,6,8,12-pentamethyl-3,9-dioxopentadecanal"                                       
A1AWF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},4~{R},5~{S},6~{S},8~{R},12~{R},13~{R})-2,4,6,8,12-pentamethyl-5,13-bis(oxidanyl)-3,9-bis(oxidanylidene)pentadecanal" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AWF "Create component" 2024-07-01 RCSB 
A1AWF "Initial release"  2024-09-18 RCSB 
A1AWF "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            A1AWF 
_pdbx_chem_comp_pcm.modified_residue_id                DPP 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
