data_UKF
# 
_chem_comp.id                                    UKF 
_chem_comp.name                                  "(2R,3R,4R,5S)-1-(6-{[(4P)-4-(5-cyclobutyl-1,2,4-oxadiazol-3-yl)-2-nitrophenyl]amino}hexyl)-2-(hydroxymethyl)piperidine-3,4,5-triol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H35 N5 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-22 
_chem_comp.pdbx_modified_date                    2023-02-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        505.564 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UKF 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8E4Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UKF N1  N1  N 0  1 N N N -35.583 -30.289 -68.789 6.972   -0.156 -0.097 N1  UKF 1  
UKF N3  N2  N 1  1 N N N -43.456 -25.684 -63.259 -3.619  3.391  0.539  N3  UKF 2  
UKF C4  C1  C 0  1 N N N -36.484 -29.604 -68.302 5.865   0.789  0.109  C4  UKF 3  
UKF C5  C2  C 0  1 N N N -36.559 -29.878 -66.739 4.532   0.051  -0.032 C5  UKF 4  
UKF C6  C3  C 0  1 N N N -37.774 -29.284 -66.067 3.380   1.035  0.183  C6  UKF 5  
UKF C7  C4  C 0  1 N N N -37.946 -29.680 -64.564 2.047   0.297  0.042  C7  UKF 6  
UKF C8  C5  C 0  1 N N N -39.138 -28.758 -63.870 0.895   1.281  0.257  C8  UKF 7  
UKF C10 C6  C 0  1 Y N N -42.562 -27.063 -65.191 -2.861  1.041  0.242  C10 UKF 8  
UKF C13 C7  C 0  1 Y N N -44.922 -26.316 -66.585 -5.483  0.160  0.085  C13 UKF 9  
UKF C15 C8  C 0  1 Y N N -48.084 -24.881 -67.813 -8.603  -1.542 -0.189 C15 UKF 10 
UKF C17 C9  C 0  1 N N N -50.440 -24.417 -68.668 -10.455 -2.593 -1.588 C17 UKF 11 
UKF C20 C10 C 0  1 Y N N -43.951 -27.171 -67.225 -4.432  -0.753 -0.009 C20 UKF 12 
UKF C21 C11 C 0  1 Y N N -42.761 -27.522 -66.497 -3.129  -0.311 0.065  C21 UKF 13 
UKF C22 C12 C 0  1 N N N -35.899 -31.731 -68.897 6.991   -1.181 0.954  C22 UKF 14 
UKF C24 C13 C 0  1 N N R -33.564 -32.313 -69.224 9.426   -1.541 0.534  C24 UKF 15 
UKF C1  C14 C 0  1 N N R -33.228 -30.900 -69.020 9.365   -0.445 -0.534 C1  UKF 16 
UKF C11 C15 C 0  1 Y N N -43.561 -26.200 -64.585 -3.907  1.952  0.345  C11 UKF 17 
UKF C12 C16 C 0  1 Y N N -44.740 -25.842 -65.305 -5.212  1.515  0.267  C12 UKF 18 
UKF C14 C17 C 0  1 Y N N -46.184 -25.844 -67.326 -6.886  -0.312 0.001  C14 UKF 19 
UKF C16 C18 C 0  1 N N N -49.329 -24.099 -67.701 -9.540  -2.710 -0.357 C16 UKF 20 
UKF C18 C19 C 0  1 N N N -50.031 -23.177 -69.533 -11.452 -1.857 -0.678 C18 UKF 21 
UKF C19 C20 C 0  1 N N N -49.196 -22.696 -68.378 -10.812 -2.609 0.501  C19 UKF 22 
UKF C2  C21 C 0  1 N N R -34.246 -30.128 -68.146 8.258   0.549  -0.175 C2  UKF 23 
UKF C23 C22 C 0  1 N N S -34.868 -32.350 -69.863 8.060   -2.227 0.628  C23 UKF 24 
UKF C3  C23 C 0  1 N N N -33.819 -28.642 -68.131 8.179   1.635  -1.250 C3  UKF 25 
UKF C9  C24 C 0  1 N N N -40.473 -28.695 -64.741 -0.438  0.543  0.116  C9  UKF 26 
UKF N2  N3  N 0  1 N N N -41.373 -27.440 -64.438 -1.541  1.485  0.322  N2  UKF 27 
UKF N4  N4  N 0  1 Y N N -46.445 -26.077 -68.625 -7.961  0.430  0.077  N4  UKF 28 
UKF N5  N5  N 0  1 Y N N -47.172 -25.076 -66.804 -7.294  -1.590 -0.174 N5  UKF 29 
UKF O1  O1  O 0  1 N N N -31.868 -30.754 -68.539 10.619  0.238  -0.590 O1  UKF 30 
UKF O2  O2  O 0  1 N N N -33.975 -28.133 -69.385 7.962   1.028  -2.525 O2  UKF 31 
UKF O3  O3  O 0  1 N N N -43.130 -24.286 -63.057 -4.326  4.060  1.271  O3  UKF 32 
UKF O4  O4  O -1 1 N N N -43.719 -26.625 -62.174 -2.675  3.905  -0.033 O4  UKF 33 
UKF O5  O5  O 0  1 Y N N -47.614 -25.483 -68.867 -8.952  -0.261 -0.032 O5  UKF 34 
UKF O6  O6  O 0  1 N N N -35.120 -33.721 -70.187 8.092   -3.213 1.662  O6  UKF 35 
UKF O7  O7  O 0  1 N N N -32.640 -32.962 -70.147 10.420  -2.502 0.175  O7  UKF 36 
UKF H2  H2  H 0  1 N N N -36.274 -28.539 -68.480 5.938   1.221  1.107  H2  UKF 37 
UKF H3  H3  H 0  1 N N N -37.443 -29.871 -68.769 5.922   1.583  -0.636 H3  UKF 38 
UKF H4  H4  H 0  1 N N N -36.573 -30.966 -66.579 4.460   -0.381 -1.030 H4  UKF 39 
UKF H5  H5  H 0  1 N N N -35.661 -29.450 -66.270 4.476   -0.743 0.713  H5  UKF 40 
UKF H6  H6  H 0  1 N N N -37.698 -28.188 -66.126 3.453   1.467  1.181  H6  UKF 41 
UKF H7  H7  H 0  1 N N N -38.667 -29.619 -66.614 3.437   1.829  -0.562 H7  UKF 42 
UKF H8  H8  H 0  1 N N N -38.221 -30.743 -64.496 1.975   -0.135 -0.956 H8  UKF 43 
UKF H9  H9  H 0  1 N N N -36.998 -29.512 -64.032 1.991   -0.496 0.787  H9  UKF 44 
UKF H10 H10 H 0  1 N N N -38.757 -27.734 -63.740 0.967   1.713  1.255  H10 UKF 45 
UKF H11 H11 H 0  1 N N N -39.382 -29.186 -62.886 0.951   2.075  -0.488 H11 UKF 46 
UKF H12 H12 H 0  1 N N N -51.448 -24.350 -68.233 -10.043 -1.969 -2.380 H12 UKF 47 
UKF H13 H13 H 0  1 N N N -50.326 -25.382 -69.183 -10.821 -3.553 -1.952 H13 UKF 48 
UKF H14 H14 H 0  1 N N N -44.114 -27.539 -68.227 -4.640  -1.803 -0.150 H14 UKF 49 
UKF H15 H15 H 0  1 N N N -42.014 -28.146 -66.964 -2.315  -1.017 -0.015 H15 UKF 50 
UKF H16 H16 H 0  1 N N N -36.916 -31.866 -69.294 7.219   -0.715 1.912  H16 UKF 51 
UKF H17 H17 H 0  1 N N N -35.825 -32.209 -67.909 6.015   -1.664 1.008  H17 UKF 52 
UKF H18 H18 H 0  1 N N N -33.588 -32.846 -68.262 9.678   -1.097 1.497  H18 UKF 53 
UKF H19 H19 H 0  1 N N N -33.266 -30.423 -70.011 9.151   -0.893 -1.504 H19 UKF 54 
UKF H20 H20 H 0  1 N N N -45.483 -25.205 -64.850 -6.024  2.224  0.340  H20 UKF 55 
UKF H21 H21 H 0  1 N N N -49.688 -24.014 -66.665 -9.034  -3.673 -0.279 H21 UKF 56 
UKF H22 H22 H 0  1 N N N -49.456 -23.423 -70.438 -11.298 -0.778 -0.643 H22 UKF 57 
UKF H23 H23 H 0  1 N N N -50.866 -22.512 -69.798 -12.492 -2.131 -0.858 H23 UKF 58 
UKF H24 H24 H 0  1 N N N -48.166 -22.424 -68.651 -11.277 -3.573 0.708  H24 UKF 59 
UKF H25 H25 H 0  1 N N N -49.652 -21.875 -67.805 -10.688 -1.997 1.394  H25 UKF 60 
UKF H26 H26 H 0  1 N N N -34.250 -30.532 -67.123 8.479   1.008  0.789  H26 UKF 61 
UKF H27 H27 H 0  1 N N N -34.846 -31.746 -70.782 7.825   -2.703 -0.323 H27 UKF 62 
UKF H28 H28 H 0  1 N N N -32.765 -28.562 -67.827 7.355   2.312  -1.024 H28 UKF 63 
UKF H29 H29 H 0  1 N N N -34.448 -28.083 -67.423 9.114   2.195  -1.269 H29 UKF 64 
UKF H30 H30 H 0  1 N N N -41.062 -29.601 -64.538 -0.511  0.111  -0.882 H30 UKF 65 
UKF H31 H31 H 0  1 N N N -40.192 -28.671 -65.804 -0.495  -0.250 0.861  H31 UKF 66 
UKF H32 H32 H 0  1 N N N -40.760 -26.652 -64.496 -1.354  2.417  0.513  H32 UKF 67 
UKF H33 H33 H 0  1 N N N -31.673 -29.833 -68.414 11.368  -0.333 -0.809 H33 UKF 68 
UKF H34 H34 H 0  1 N N N -33.716 -27.219 -69.391 7.901   1.659  -3.256 H34 UKF 69 
UKF H35 H35 H 0  1 N N N -35.967 -33.796 -70.610 7.258   -3.689 1.778  H35 UKF 70 
UKF H36 H36 H 0  1 N N N -31.767 -32.964 -69.773 10.514  -3.227 0.809  H36 UKF 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UKF O6  C23 SING N N 1  
UKF O7  C24 SING N N 2  
UKF C23 C24 SING N N 3  
UKF C23 C22 SING N N 4  
UKF C18 C17 SING N N 5  
UKF C18 C19 SING N N 6  
UKF O2  C3  SING N N 7  
UKF C24 C1  SING N N 8  
UKF C1  O1  SING N N 9  
UKF C1  C2  SING N N 10 
UKF C22 N1  SING N N 11 
UKF O5  N4  SING Y N 12 
UKF O5  C15 SING Y N 13 
UKF N1  C4  SING N N 14 
UKF N1  C2  SING N N 15 
UKF C17 C16 SING N N 16 
UKF N4  C14 DOUB Y N 17 
UKF C19 C16 SING N N 18 
UKF C4  C5  SING N N 19 
UKF C2  C3  SING N N 20 
UKF C15 C16 SING N N 21 
UKF C15 N5  DOUB Y N 22 
UKF C14 N5  SING Y N 23 
UKF C14 C13 SING N N 24 
UKF C20 C13 DOUB Y N 25 
UKF C20 C21 SING Y N 26 
UKF C5  C6  SING N N 27 
UKF C13 C12 SING Y N 28 
UKF C21 C10 DOUB Y N 29 
UKF C6  C7  SING N N 30 
UKF C12 C11 DOUB Y N 31 
UKF C10 C11 SING Y N 32 
UKF C10 N2  SING N N 33 
UKF C9  N2  SING N N 34 
UKF C9  C8  SING N N 35 
UKF C11 N3  SING N N 36 
UKF C7  C8  SING N N 37 
UKF N3  O3  DOUB N N 38 
UKF N3  O4  SING N N 39 
UKF C4  H2  SING N N 40 
UKF C4  H3  SING N N 41 
UKF C5  H4  SING N N 42 
UKF C5  H5  SING N N 43 
UKF C6  H6  SING N N 44 
UKF C6  H7  SING N N 45 
UKF C7  H8  SING N N 46 
UKF C7  H9  SING N N 47 
UKF C8  H10 SING N N 48 
UKF C8  H11 SING N N 49 
UKF C17 H12 SING N N 50 
UKF C17 H13 SING N N 51 
UKF C20 H14 SING N N 52 
UKF C21 H15 SING N N 53 
UKF C22 H16 SING N N 54 
UKF C22 H17 SING N N 55 
UKF C24 H18 SING N N 56 
UKF C1  H19 SING N N 57 
UKF C12 H20 SING N N 58 
UKF C16 H21 SING N N 59 
UKF C18 H22 SING N N 60 
UKF C18 H23 SING N N 61 
UKF C19 H24 SING N N 62 
UKF C19 H25 SING N N 63 
UKF C2  H26 SING N N 64 
UKF C23 H27 SING N N 65 
UKF C3  H28 SING N N 66 
UKF C3  H29 SING N N 67 
UKF C9  H30 SING N N 68 
UKF C9  H31 SING N N 69 
UKF N2  H32 SING N N 70 
UKF O1  H33 SING N N 71 
UKF O2  H34 SING N N 72 
UKF O6  H35 SING N N 73 
UKF O7  H36 SING N N 74 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UKF SMILES           ACDLabs              12.01 "OCC1C(O)C(O)C(O)CN1CCCCCCNc1ccc(cc1[N+]([O-])=O)c1nc(on1)C1CCC1"                                                                                                                                         
UKF InChI            InChI                1.06  "InChI=1S/C24H35N5O7/c30-14-19-21(32)22(33)20(31)13-28(19)11-4-2-1-3-10-25-17-9-8-16(12-18(17)29(34)35)23-26-24(36-27-23)15-6-5-7-15/h8-9,12,15,19-22,25,30-33H,1-7,10-11,13-14H2/t19-,20+,21-,22-/m1/s1" 
UKF InChIKey         InChI                1.06  QTIHMFZOPONAII-CIAFKFPVSA-N                                                                                                                                                                               
UKF SMILES_CANONICAL CACTVS               3.385 "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)CN1CCCCCCNc2ccc(cc2[N+]([O-])=O)c3noc(n3)C4CCC4"                                                                                                                      
UKF SMILES           CACTVS               3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)CN1CCCCCCNc2ccc(cc2[N+]([O-])=O)c3noc(n3)C4CCC4"                                                                                                                             
UKF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1c2nc(on2)C3CCC3)[N+](=O)[O-])NCCCCCCN4C[C@@H]([C@H]([C@@H]([C@H]4CO)O)O)O"                                                                                                                     
UKF SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1c2nc(on2)C3CCC3)[N+](=O)[O-])NCCCCCCN4CC(C(C(C4CO)O)O)O"                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UKF "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,3R,4R,5S)-1-(6-{[(4P)-4-(5-cyclobutyl-1,2,4-oxadiazol-3-yl)-2-nitrophenyl]amino}hexyl)-2-(hydroxymethyl)piperidine-3,4,5-triol"         
UKF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{R},5~{S})-1-[6-[[4-(5-cyclobutyl-1,2,4-oxadiazol-3-yl)-2-nitro-phenyl]amino]hexyl]-2-(hydroxymethyl)piperidine-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UKF "Create component" 2022-08-22 RCSB 
UKF "Initial release"  2023-02-22 RCSB 
# 
